Haliaeetus albicilla (white-tailed eagle): 104315926
Help
Entry
104315926 CDS
T08398
Name
(RefSeq) LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
hald
Haliaeetus albicilla (white-tailed eagle)
Pathway
hald03015
mRNA surveillance pathway
hald03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hald00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104315926
09123 Folding, sorting and degradation
03018 RNA degradation
104315926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hald03019
]
104315926
03041 Spliceosome [BR:
hald03041
]
104315926
Messenger RNA biogenesis [BR:
hald03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104315926
mRNA cycle factors
Stress granule specific factors
104315926
Spliceosome [BR:
hald03041
]
Complex C
Other components
Complex C specific factors
104315926
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_5
RRM_7
RRM_occluded
RRM_3
NOP5NT
Motif
Other DBs
NCBI-GeneID:
104315926
NCBI-ProteinID:
XP_009914423
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MITAASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEK
HEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERLSRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPAAGGYFMPAVPQAQSRP
TYYAPNQMTQMRPNPRWQQGGRPQGFQGMPNAMRQSGPRPALRHLAPAGNAPASRGLPAA
AQRVGVGTAAQNLAPRXXXXXXXXXXXPPYKYASSVRSPHPAVQPLQAPQPAVHVQGQEP
LTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLR
SKVEEAVAVLQAHQAKKEAAQKVGVVAATS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgatcacggctgccagcagttacccgatggcatcgctgtacgtgggtgacctgcacccc
gatgtcaccgaggccatgctctacgagaagttcagccctgctgggcctgttctctccatt
cgagtctgcagggatatgatcacccgtcggtccctcgggtatgcctatgtcaacttccag
cagccagcagatgctgagcgtgctctagataccatgaattttgatgtgatcaaaggaaaa
cccattcgcatcatgtggtctcagagggacccctccttgaggaagtcaggggttgggaat
gtcttcattaagaacctggacaaatccattgataacaaggcactttatgacacattctca
gcgtttgggaatattttgtcctgcaaggtggtgtgtgatgagaatggctctaagggctac
gcatttgtgcactttgagacccaggatgctgcagatagagccatcgagaagatgaacggc
atgctgctaaacgaccgcaaagtatttgttgggagattcaagtctcgtaaagagcgggag
gctgagttgggagccaaggcaaaggaatttaccaatgtttatattaaaaactttggggat
gacatggatgatgaaagactaaaggagctcttcagcaaatatggtaaaactctgagtgtt
aaagtgatgacagaccccactggaaaatccaaaggctttggctttgtaagctttgaaaag
catgaagatgctaacaaggcagtagaagaaatgaatggaaaggatatcaatgggaaaatg
gtatttgtaggccgagcacagaagaaggtcgagcgccaggcagagctgaaacggaagttt
gaacagctaaaacaggagagactcagccggtaccagggtgttaacctatacattaaaaac
ctagatgacactatagacgatgaaaaactgaggaaggagttttcaccttttgggtcaata
acgagtgccaaggtgatgctggaagatggacggagcaaagggtttggctttgtctgcttt
tcctctccagaggaagctacgaaagctgtgacagagatgaatgggcgaattgtgggctca
aagccattgtatgttgcacttgcacaaaggaaagaggagcgaaaggcccatctgactaat
cagtatatgcagcgcattgctgggatgagagccttgcctgccaacacaatcattaatcag
ttccagcctgctgctgggggatatttcatgcctgctgtgccccaggctcagagcagaccc
acttactatgcacccaatcagatgacgcagatgagacccaacccacgctggcagcaaggg
ggaagacctcaaggcttccagggaatgccaaatgccatgcgccagtctggaccacggcca
gcactgcgccatctggcccctgccggcaatgctccggcctctcgtggcctccctgccgct
gcccagcgagttggcgttggcaccgcagcgcagaatttagctcctcgnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnttcctccttataaatatgcctcaagtgtccgcagcccacac
ccagctgtacagcctttgcaggcacctcagcctgcagtacatgtgcagggacaagaaccg
ctaacggcctccatgctggctgctgcccctccccaggagcagaaacagatgctgggggaa
cgtttgtttcctctgattcaagctatgcaccccagccttgcagggaagatcacaggaatg
ctgctagagattgacaactcagagctgttgcacatgctcgagtctcccgagtccctccgg
tcaaaggtggaggaggctgttgcggtgttgcaggctcaccaagccaagaaggaagctgcc
cagaaggtgggcgtggttgctgctacctcttaa
DBGET
integrated database retrieval system
