Halomicrobium sp. LC1Hm: LC1Hm_0542
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Entry
LC1Hm_0542 CDS
T06261
Symbol
rnhB
Name
(GenBank) Ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LC1Hm_0542 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hall03032
]
LC1Hm_0542 (rnhB)
Enzymes [BR:
hall01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
LC1Hm_0542 (rnhB)
DNA replication proteins [BR:
hall03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
LC1Hm_0542 (rnhB)
Elongation factors (archaeal)
LC1Hm_0542 (rnhB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
QGA81606
UniProt:
A0A5Q0UJ62
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All DBs
Position
complement(493952..494584)
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AA seq
210 aa
AA seq
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MRFGVDEAGKGPVLGSMFAAAVRCDPGDLPDGVGDSKGIPDDRRERLAEAIRSVATVGLA
EIPRTRIDDPETDMNTLTVAAHAEALSAVATDDLSGLVDAGDTDAERFGRRVADRVDAEI
DLGAAHGADETDPLVGAASIVAKSAREAHVAALAEEYGPVGSGYPSDPTTREFLKRYVDE
HGDLPDCARASWSTCDDVLAAAEQSSLASF
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgcgattcggcgtcgacgaggccggcaaggggccggtgctgggatcgatgttcgccgcg
gcggtccgctgtgatcccggcgacctccccgacggcgtcggtgactcgaagggaatcccc
gacgaccgacgggagcgactggccgaggcgatccggtctgtcgcgacggtcgggctcgcc
gagattccacggacgcgaatcgacgatcccgagacggacatgaacacgctgaccgtcgcc
gcccacgccgaggcgctctcggcggtcgcgacggacgatctctcggggctggtcgacgcc
ggcgacacggacgccgagcggttcggccggcgggtggccgaccgggtcgacgccgagatc
gatctgggggccgcacacggggccgacgagaccgacccgctcgtgggggcggccagtatc
gtcgccaagtccgcccgcgaggcccacgtcgcggcgctggccgaggagtacggccccgtc
ggcagcggctacccgagcgatccgacgacacgcgagtttctgaagcgctacgtcgacgag
cacggcgacctgcccgactgcgcgcgggcgtcgtggtcgacctgcgacgacgtgctggcc
gccgcggaacagtcgtcgctggcgtcgttctga
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integrated database retrieval system