KEGG   Halomicrobium sp. LC1Hm: LC1Hm_0542
Entry
LC1Hm_0542        CDS       T06261                                 
Symbol
rnhB
Name
(GenBank) Ribonuclease HII
  KO
K03470  ribonuclease HII [EC:3.1.26.4]
Organism
hall  Halomicrobium sp. LC1Hm
Pathway
hall03030  DNA replication
Brite
KEGG Orthology (KO) [BR:hall00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LC1Hm_0542 (rnhB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hall03032]
    LC1Hm_0542 (rnhB)
Enzymes [BR:hall01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     LC1Hm_0542 (rnhB)
DNA replication proteins [BR:hall03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     LC1Hm_0542 (rnhB)
   Elongation factors (archaeal)
     LC1Hm_0542 (rnhB)
SSDB
Motif
Pfam: RNase_HII
Other DBs
NCBI-ProteinID: QGA81606
UniProt: A0A5Q0UJ62
LinkDB
Position
complement(493952..494584)
AA seq 210 aa
MRFGVDEAGKGPVLGSMFAAAVRCDPGDLPDGVGDSKGIPDDRRERLAEAIRSVATVGLA
EIPRTRIDDPETDMNTLTVAAHAEALSAVATDDLSGLVDAGDTDAERFGRRVADRVDAEI
DLGAAHGADETDPLVGAASIVAKSAREAHVAALAEEYGPVGSGYPSDPTTREFLKRYVDE
HGDLPDCARASWSTCDDVLAAAEQSSLASF
NT seq 633 nt   +upstreamnt  +downstreamnt
atgcgattcggcgtcgacgaggccggcaaggggccggtgctgggatcgatgttcgccgcg
gcggtccgctgtgatcccggcgacctccccgacggcgtcggtgactcgaagggaatcccc
gacgaccgacgggagcgactggccgaggcgatccggtctgtcgcgacggtcgggctcgcc
gagattccacggacgcgaatcgacgatcccgagacggacatgaacacgctgaccgtcgcc
gcccacgccgaggcgctctcggcggtcgcgacggacgatctctcggggctggtcgacgcc
ggcgacacggacgccgagcggttcggccggcgggtggccgaccgggtcgacgccgagatc
gatctgggggccgcacacggggccgacgagaccgacccgctcgtgggggcggccagtatc
gtcgccaagtccgcccgcgaggcccacgtcgcggcgctggccgaggagtacggccccgtc
ggcagcggctacccgagcgatccgacgacacgcgagtttctgaagcgctacgtcgacgag
cacggcgacctgcccgactgcgcgcgggcgtcgtggtcgacctgcgacgacgtgctggcc
gccgcggaacagtcgtcgctggcgtcgttctga

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