Halomicrobium sp. LC1Hm: LC1Hm_2610
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Entry
LC1Hm_2610 CDS
T06261
Symbol
dppD3
Name
(GenBank) ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LC1Hm_2610 (dppD3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hall02000
]
LC1Hm_2610 (dppD3)
Transporters [BR:
hall02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LC1Hm_2610 (dppD3)
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_16
AAA_22
SMC_N
ABC_ATPase
NACHT
AAA_29
RsgA_GTPase
nSTAND1
MMR_HSR1
AAA_25
P-loop_TraG
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
QGA83643
UniProt:
A0A5Q0UPP6
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Position
complement(2437953..2439008)
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AA seq
351 aa
AA seq
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MQGQRTQGGPDSADPIIEARNVCVTYDLEHRDAMVLDDVSIDLRRGEILGVVGESGSGKS
MLANAMMDAVEEPGITTGEVTYHPEDGGEPVDVLDLSTEELKEFRWEEVSMVFQGALSSF
NPTMSIRGHFEETLAAHDYDVEAGMDRARQLLSDLYLDPDRVLDSYAHELSGGMSQRALI
ALSLILEPQVLLMDEPTAALDLLMQRSILSLLADIKEKYDLTILFITHDLPLVAGLADRL
AILYAFELAEVGTATQIAHDSKHPYTRALLQAVPNLDAPTDSMRPIEGTAPNPAHVPDGC
HYAPRCPLATRECHEETPPWIDVEDDHRSACFHYDEAEDAVPFDLSEVSDA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggacaacgcacgcagggtggccccgacagcgcggacccgatcatcgaggcccgc
aacgtctgtgtcacctacgacctggagcaccgagacgcgatggtactggacgacgtgtcg
atcgacctccgccggggcgagatcctcggcgtcgtcggcgagtccggcagcggcaagtcg
atgcttgcaaacgccatgatggacgccgtcgaggaacccgggatcacgaccggggaggtg
acctaccaccccgaggacggcggcgaaccggtcgacgttctcgacctctcgaccgaggag
ctcaaagagttccgctgggaggaagtgtcgatggtgttccagggcgcgctgtcgtcgttc
aaccccaccatgtcgatccgcgggcacttcgaggagacgctggcggcccacgactacgac
gtggaggcggggatggaccgggcccggcagttgctgtcggacctgtacctcgaccccgac
cgcgtgctcgactcgtacgcccacgaactctcgggcgggatgagccagcgggcgctgatc
gcactcagcctgatcctcgaaccgcaggtactcctgatggacgagccgacggcggcgctc
gacctgctgatgcagcgctcgatcctctccttgctggccgacatcaaggagaagtacgac
ctgacgatcctctttatcacccacgacctcccgctggtcgcgggactggccgaccgactg
gcgatcctctatgccttcgaactcgcggaggtcggcaccgcaacgcagatcgcccacgac
tcgaagcacccctacacgcgggcgctgctgcaggccgtgccgaacctcgacgcgccgacc
gactcgatgcgaccgatcgaggggaccgcgccgaacccggcccacgtccccgacggctgt
cactacgcgccgcggtgtccgctcgcgaccagggagtgtcacgaggagacgccgccgtgg
atagacgtcgaggacgaccaccgctcggcctgcttccactacgacgaggccgaggacgcc
gttccgttcgacctctcggaggtgtccgacgcgtga
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