Halomonas sp. R57-5: HALO0020
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Entry
HALO0020 CDS
T04029
Name
(GenBank) DNA-3-methyladenine glycosylase 1
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ham
Halomonas sp. R57-5
Pathway
ham03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HALO0020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ham03400
]
HALO0020
Enzymes [BR:
ham01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HALO0020
DNA repair and recombination proteins [BR:
ham03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HALO0020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CEP33702
UniProt:
A0A0D6E2H1
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All DBs
Position
I:complement(17597..18208)
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AA seq
203 aa
AA seq
DB search
MTPETIDQAMQALAKADPDIARAYPLVGAPQPRERDPGFATFFSTIVSQQLSTEAARAIM
GRVNTLLPELHAKAVMEIEGQALRDAGLSWRKIEYAKGLAEAELAGTFSADGLEQLSDDE
AIAAITELRGFGRWSAEIYLMFSLKRPDIFPADDLALRVALGRLKGMDDKPTPKQARQLV
EAWAPWRTVGSLFLWHYYRGEPL
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccgaaacaatcgaccaagccatgcaagcgttggctaaggcagacccggatatc
gcgcgcgcatacccattggtgggcgccccccagccccgggaacgtgacccgggctttgcg
acgttcttcagcactatcgtcagccagcaactttccaccgaggccgctcgtgcgattatg
ggccgcgtcaatacgttgctgcccgagctgcacgctaaagcggtcatggagatagagggc
caagcgctgcgcgatgctgggctctcctggcgtaaaattgagtacgccaagggcctagca
gaagcggagctggcaggcacatttagcgctgatgggcttgagcagctaagcgacgacgag
gcgattgccgcgattactgagctgcgcggctttggccgctggagcgccgaaatctacctg
atgttctcgctgaaacgcccggatatctttcccgccgacgatcttgccctacgggtagcc
ttgggccgtttaaaaggcatggacgacaagcccacgcccaagcaagcccgtcagttggtg
gaagcctgggctccctggcgcacggtggggtcactgtttttgtggcactactaccgcggc
gagccgttatag
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