Halomonas sp. R57-5: HALO2923
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Entry
HALO2923 CDS
T04029
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ham
Halomonas sp. R57-5
Pathway
ham00470
D-Amino acid metabolism
ham00550
Peptidoglycan biosynthesis
ham01100
Metabolic pathways
ham01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HALO2923
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HALO2923
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HALO2923
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ham01011
]
HALO2923
Enzymes [BR:
ham01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HALO2923
Peptidoglycan biosynthesis and degradation proteins [BR:
ham01011
]
Precursor biosynthesis
Amino acid ligase
HALO2923
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATPgrasp_ST
ATP-grasp_4
ATP-grasp_3
ATPgrasp_YheCD
RimK
ATP-grasp_5
GARS_A
TTL
Motif
Other DBs
NCBI-ProteinID:
CEP36605
UniProt:
A0A0D6EAJ0
LinkDB
All DBs
Position
I:complement(3153879..3154820)
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AA seq
313 aa
AA seq
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MSVDVATPHSVGKVVVVYGGTSAEREVSLKSGAAVLEALQRKGVDACGYDPRDNGLVGLE
QLAPSVVFVALHGRGGEDGTLQGALELLGIAYTGSGVLASALGMDKQRTKQVWSAVGLPT
PESIMLDQTADWSAVVAQLGLPLIVKPVHEGSTLGISIVKSQAALEAAYREAAQFDARVM
AERFVVGDEYTVALLGDQVLPAIRVEVPGGFYDYEAKYIANTTQYHLPCGLSAEDEAALA
ELCQQAFTAIGGVGWGRVDVMRDSEGRFWLLEVNTVPGMTDHSLVPQAAAHAGIGFDDLV
LHILNTAGEPFTA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtcgacgtagcaactccccactctgttggaaaagtcgtggttgtttacggcggc
acctccgcggaacgcgaggtctcgctgaaaagcggtgcggcggtacttgaagcgctgcag
cgtaaaggtgtcgatgcctgcggctacgacccccgagacaacggcttggtaggcttagag
caactggctccctcggtggtcttcgttgccctgcatggtcgcggcggggaagacggcacc
ctgcagggggcattagagctgctgggtattgcttataccggtagcggggtgctggcctcg
gcgctggggatggataagcagcgcaccaaacaggtgtggagtgcagttggcctgcctacc
cctgaaagcattatgctggatcaaacagcggactggtcagcggtcgtcgcgcagctcggc
ttaccgctgatcgtgaagccggtacacgaaggctcgacgctgggaattagcatcgtaaaa
agtcaggcagcgcttgaggcggcctaccgcgaggcagcccagttcgacgcccgcgtgatg
gcggagcgctttgtagtgggcgacgagtatacggtcgcgctgctaggtgaccaggtgttg
cccgccatccgtgttgaagtgcccggcggcttctacgactacgaagccaaatatatcgct
aataccacccagtaccacttgccttgcggcttatctgccgaggatgaagcagcactggct
gagctgtgccagcaggcgtttacagccataggcggggtaggctggggccgggttgatgtc
atgcgcgatagcgaagggcgtttttggttattggaagtcaatacggtgccaggcatgacc
gatcatagtttagtgcctcaagcagcggcgcatgcgggtattggctttgatgatctagtg
ctgcacatactcaacaccgcaggcgagccgttcaccgcatga
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