Homarus americanus (American lobster): 121863566
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Entry
121863566 CDS
T07477
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121863566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121863566
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
121863566
mRNA cycle factors
Common to processing body (P body) and stress granule
121863566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
SART-1
Motif
Other DBs
NCBI-GeneID:
121863566
NCBI-ProteinID:
XP_042218201
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MKTASQLLREAEGLKSRLNNCIPLVGNNEAWAVQHQLQVVCGQLLVHWIEAALDHGVERD
LWNLGFRNTITQLQAQAKDKQGGSSEARDMLGWFLNSASGFYLQLFNQICSEYGLDLPFR
RKDSIYGAVDLNGSTQGKSKVSSLKNALYLCQYCLVHLGDLARYRHQAKQAETYYRHAVM
VAPTSGHPYNQLALLEAGRGNRLAAVALYVRAMCVPCPFPGAPANLTQTLSKLLATSSSR
ELSGSTRVTGEEYTNLFLQCHAQLYLHGDAASAREALPTLCSALSTLVATNAFTRTSLIQ
MVLVNLFALNYFSGAVKVKTNEETGGRKDEEKLEKPRDVKECDGCLPVVEELTVGVLAAL
LLPVHTIRDPDQLMTYPALPAVRLLFEWVHCEKGMFMSEAMKNKQQIWPGLCTLVNNLQQ
PLESFDATKYSEVPLVEDWDLQGFEPLQKMLSKYKYREGLSKPSPEEYNCIRASRLTDIA
KWFVGQDIDGNSVIKICEGSKDSPGGLMFEPMKHLSPPVDEVRALEQLSLQPKPEEKLSG
KRGKVGILKPQGSLERARETREQQQDQPEHPEKSLRITGDGEDMRESGVGGIGMGIKVVS
GSGQLQSSPSCQPSQQQQQQQQQQQQQQQQQQQQQQQQQHQSQGQGQPRPPRSRTNVALQ
AIMKRNSAMQEAKQVTFKTPSPAISPNPSEASSDSHRSQLSTPPLMPPSSQRDPMSSSPM
PHHLGQMYQINTPPQGQGTSFVRQNQPTENNFSNQQHQQFGGQPPWGGVSGMSGNVPSQH
GIGRPLHQQNQPMNSGPNFNMQRNGSGPSPQNVLQQQMPTSTPSHSDILTAGVFNRPPLE
GFHQLSGPVPPRPGVDISNRMREPAPRMLEMMGMTRAPPSFGPVEGLGNPCRMRPPGTEG
QGLENSPRMTQAPFRPHQEMDPVTSQAKMNHITHPLLSPGAMNAHLYGMDGRQNVSGSSG
PGVSGPRNMFGESDMGPPRGPGLSPPMGMGWGPGHNEGKSYMNHPPPTLANLLQQHAPVD
IRLNLPMDHSSDQLNPGLARLPGGPSVHNPAMNTRSPPGVGPLGAVPLGILSMPSTQPPG
SIPHNQPPRGQQSFMQEGGEGDGPSGNTYSLFSPMSGGSMGMGAGPSRTVPHPLYPSNSQ
PSGQQSLWSGPGPSPLERLLEQKKYSNVPK
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgctagtcagctcctaagggaggctgagggtctgaagagtcgtctgaataat
tgtatcccactcgtgggtaacaatgaggcttgggctgtccaacaccaacttcaggtggtg
tgtgggcagcttttggtccactggattgaggcggccctggaccatggggtggagcgcgac
ctgtggaacctgggctttaggaacaccataacacaacttcaagcacaggcaaaagataaa
cagggaggttcaagtgaagctcgtgatatgcttggttggttcctgaactcagccagcggc
ttctacttgcaactcttcaatcaaatatgctcagaatatggccttgacttgccatttaga
aggaaagacagcatatatggtgctgtagatctcaatgggtcaacccaggggaagtccaaa
gtgagcagtctaaaaaatgccctctacttgtgccagtactgtctcgtgcaccttggtgac
ttagccaggtaccgccatcaagccaagcaagccgagacttactacagacatgctgtcatg
gtggcgcccaccagtggtcatccatacaatcagcttgcccttttggaagctggacgaggg
aaccgtctggcagcagtggcactatatgtccgggcaatgtgcgtgccttgtccctttcct
ggtgctcctgctaacctaacacagacactgtccaagttgctggccaccagcagtagccgc
gaactgagtgggtcgacacgagtcaccggagaagaatacaccaatctttttcttcagtgc
catgcccagctatacctccatggagatgctgccagtgcccgagaggctctcccaactctg
tgttctgctctgtccactctggttgccacaaatgccttcaccagaactagtctcatacag
atggtactggtgaatctgtttgccctaaactacttttctggagctgttaaggttaagaca
aatgaagagactggtgggaggaaggatgaagagaagctggagaagccaagggatgttaaa
gagtgtgatggctgtctaccagtggtggaggagctgactgtgggagtgctggcagctctt
ttactgcctgttcataccatccgtgacccagaccaacttatgacatatcctgccctccct
gctgtgcggctgttgttcgagtgggttcactgtgagaagggtatgttcatgtcagaagct
atgaagaataagcagcagatttggcctggactctgcacattagtcaacaacttgcagcag
cctttggaatcttttgatgctacaaaatattcggaggtgccattagtggaagattgggac
ctacaaggctttgaaccactccaaaaaatgttgagcaaatacaagtaccgtgaaggccta
tccaagccaagtccagaggaatacaactgtatccgagcctcccgactgactgatattgcc
aaatggtttgttggacaagatattgatggaaattctgtcatcaaaatttgtgaagggagt
aaagactcgccaggagggttaatgtttgagccaatgaaacacctgagcccacctgtggat
gaagttcgtgcccttgagcagctctcccttcagcccaaacctgaggaaaaattatctggg
aagcggggtaaagttggtattctgaagccacagggatccttggaacgagcaagggaaaca
cgtgaacaacagcaagaccaacctgagcacccagagaagtccctgagaatcactggagat
ggtgaagatatgagagaatcaggtgttggtggtattggtatgggcatcaaggtggtatct
ggttctggtcagttacaaagttcaccctcatgccagccctcacagcaacaacaacaacag
cagcagcagcagcagcaacaacaacaacaacagcagcagcagcaacaacaacagcagcac
cagagccaaggacaaggccagcctcgtcccccacgctctcgcaccaatgtggcgctgcaa
gcaattatgaagaggaactcggccatgcaagaagccaaacaggtaacttttaagactccc
tccccagccatctctccaaatccatctgaagcttccagtgacagtcatcgtagccaactt
tccaccccaccactgatgcctcccagttctcagcgagatcccatgtcaagttcccccatg
cctcatcatcttggacaaatgtatcagattaacacaccacctcagggacaaggaacttca
tttgtacgacagaaccaacccactgaaaataatttttcaaatcaacaacaccagcaattt
ggaggacaacctccttggggaggagtaagtggaatgagtggaaatgtcccttcccagcat
ggcatcggtcgacctctacatcaacaaaaccaacccatgaactctggaccaaacttcaat
atgcaaagaaatggcagtgggccatctccacaaaatgttctacagcaacagatgccaaca
tccacacccagtcattctgacatactaacagcaggtgtgtttaacagaccacctctagag
ggcttccatcaacttagtggacctgttccaccgaggccaggagtagatatatcaaataga
atgcgagagccagcacccagaatgctggaaatgatggggatgacacgtgcgcctccttcc
tttggaccagtggagggattgggaaacccatgtaggatgcgccctccaggcacggaaggc
caagggttagagaattctcctcgcatgactcaggcaccatttagaccacatcaggaaatg
gatccagtcacttctcaagccaagatgaatcatataacccatccattactctcacctgga
gctatgaatgcacatctttatggtatggatggcaggcagaatgtcagtggatctagtggt
cctggagtgtcaggtcccaggaatatgtttggtgaaagtgacatgggaccaccacggggc
ccaggactatcaccacccatggggatgggctggggtccagggcacaatgaaggcaaaagc
tatatgaatcatcctcctcctactttggcaaatcttttgcagcaacatgccccagttgat
ataaggctcaacctacctatggatcacagttcagatcagctcaatcctgggttagccagg
ctacctggtggtccctcagtacacaaccctgccatgaacactcgcagccctcctggtgta
ggcccacttggtgcagttcccctcggtatactctccatgccttccacacaacccccaggc
tccatacctcacaaccaaccacccagaggacagcagtcatttatgcaagagggtggtgaa
ggtgatggaccttcaggcaacacatattcactcttcagtcccatgagtggaggcagcatg
ggtatgggagctggtcccagtcgcacagtccctcatcccctttacccaagcaattcacag
ccaagtggacaacagtcgctgtggtctggtcctggcccatctccactggagcgtctccta
gagcagaagaagtacagcaatgttcctaagtga
DBGET
integrated database retrieval system