Homarus americanus (American lobster): 121869311
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Entry
121869311 CDS
T07477
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121869311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hame03041
]
121869311
Spliceosome [BR:
hame03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
121869311
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
PRP4
NBCH_WD40
Ge1_WD40
eIF2A
WD40_like
Nbas_N
Motif
Other DBs
NCBI-GeneID:
121869311
NCBI-ProteinID:
XP_042226498
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MSDGEDSPVVVGGGGVSERQWYAPDTAMSGAESPPDSPDSPVNSANIHTSNEYMELDEPE
MLDEKKALLEEFERKRRARMIHVTTDDSEVKQQLRQLGEPICLYGEGPADRRNRLKEILS
RLGEDALKKTVGGQQEADTPDHDQERPEETWYHEGPQPLKEARNFIVNYSIPRARARLKR
EHLENQVPEATRTARRQEVQNKLRSFGLLGSQNADARPICYCSFSPNGKLLATSSWSGLV
KLWQVSNCLEERTFRGHNCYVDCVEWHPSATLSMEPTALNLVSSGRDGTVQLWSLNGEEP
LGELPTLEARVSRVCFHPSGRFLGACVHDNSMRLWDLEIQEEVLFQEGHSKPVYCLAFQK
DGSLAATGGMDAYGRIWDLRTGRCVMFLSAHQNPVLAIDWSPDGYHLVTGSEDNTARVWD
MRQRRCIYTIPAHTGIITGVRYDRIGGQYIVTCSYDGSVRLWCHGSFQPMRALEGHGQKV
MGVDVSPTEGIIATCSFDRTFKIWGPD
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatggagaagactcccccgtggtggtgggtggtggaggggttagtgagcgccag
tggtatgcaccagacactgcaatgtctggtgcagaatccccaccagattcccctgatagt
ccagtaaattcagcaaatattcataccagcaatgaatacatggagttggatgaaccagaa
atgctggatgagaaaaaagcattgttggaggagtttgagcggaagcgtcgagctcgaatg
attcatgttacaacagatgatagtgaggtaaagcagcagttaagacaactgggtgagcca
atttgcttgtatggtgaaggccctgctgatagaagaaaccgcttgaaagaaattttgtcc
cggcttggtgaagatgctctgaaaaagacagttggtgggcaacaagaagctgacacacca
gaccatgatcaagagcgaccagaggagacgtggtatcacgagggaccacagccgttaaaa
gaggcacggaattttattgtcaattattccattcctcgtgctagagcaaggttgaaaaga
gagcatctagaaaaccaagtcccagaagcaacacgcactgccagaaggcaggaagttcag
aataaattaagatcatttggtcttttaggtagtcaaaatgctgatgctagaccaatttgt
tattgtagttttagtccaaatggaaaactcttagcaaccagttcatggagtggtcttgtc
aagttatggcaagtaagtaattgtttggaggaacgaacatttcgcggccacaattgttat
gtagactgtgttgagtggcaccctagtgctacattatctatggagccaacggctttgaat
ttggtgtctagtggacgtgatggaactgtgcagctatggagcttaaatggagaggagcct
cttggggaacttccaactctcgaagcaagagtatcacgagtttgctttcatccaagtgga
aggttccttggtgcatgtgtacatgataatagcatgaggttatgggatttagagatccaa
gaagaggttcttttccaagaaggtcattctaagcctgtgtactgcttagcttttcagaag
gatggatcattagccgccacaggtggcatggatgcttatgggcgtatttgggacctgaga
acagggaggtgtgttatgttcttgagtgcacaccagaatccagttttagccattgattgg
tcccctgatggctaccatttagtaacaggcagtgaggataacacggcaagagtttgggac
atgaggcaacgtcgatgtatctacactatcccagctcatacaggcattattactggtgtt
cgttatgatagaataggaggacagtacatcgttacatgttcatatgatggttcagttcgt
ctttggtgtcatggatcttttcaaccaatgcgtgctctggaaggacatggccagaaggtt
atgggtgtagatgtttcacccacagaaggtatcattgcaacctgttcctttgaccgtaca
ttcaaaatttggggtccagactaa
DBGET
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