Homarus americanus (American lobster): 121870839
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Entry
121870839 CDS
T07477
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121870839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hame03021
]
121870839
03036 Chromosome and associated proteins [BR:
hame03036
]
121870839
Transcription machinery [BR:
hame03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121870839
Chromosome and associated proteins [BR:
hame03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121870839
PBAF complex
121870839
GBAF(ncBAF) complex
121870839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
121870839
NCBI-ProteinID:
XP_042228742
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MAINPRKDGGPNVKYYESTETVSQFEHVKTWLMKNAKKYVQADPPNNKGLSQLVVQLLQF
MEDNFGPKASKAPMTKLPMKYFLDFKTGGGLCHILSTVYKFKSDQGWRRFDFQSPSRKDA
NVELFREIEKSLLSNKCWSKPTVFIHGEVDKELRNELKDIVKRHDGKIVDEEEEASHVVY
DEQDPLDDEFARAVMRRDRQTLFHFYYMPDSYDSWAPAVELDYDTPESPQFYDGQWKVCA
NWLQDLESYNEWMNEEDYEVDDSGTKKKHRGCLSVDDTMGLSDPDKKKKAKKRPRSPPSP
RSKRKGSRNTTTPGKPVKKTKMEEEEEDLTRDMEDPAPEPAVTEVTTGSKIQPSKGGNYM
DLDEEAAEKTEKTEGPPVPDSEDTATDQTHHIIVPSYAAWFDYNAIHAIEKRGLPEFFNG
KNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAVMRVHAFLEQWGLINY
QVDADARPTPMGPPPTSHFHVLADTPAGLQSINPPKVNQPSAAKHLMDFDKKTTDKKPDF
SIGTDFGLKLDQYSKKTGALKNKSAASQAREWTEQETLLLLEALEMYKDDWNKVCEHVGT
RTQDECILQFLRLPIEDPYLEDSEVGSGGSPNALGPLAYQPIPFSKSGNPIMSTVAFLAS
VVDPRIAASAAKAAMDEFCRIKDEVPAALLDSHIKNVADHAASNEGKVDPIAGLGKSGIA
GTEPEGEEKKEGETESEKKDDAKKDGEKKDEEKKDEGDKEKKDEAMEVDKPDEKKTEEKK
EGEEEDKKEDKADTKEEKKEEISPEEKKLDAERERLRKDASVQQAASAALGSAAVKAKHL
AAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRERESLELQRQQLLQERQQFHL
EQLKAAEMRARQHALHQLTQGASPAHSPAPSMTQVHQ
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaacccgaggaaggacggaggccctaatgtcaaatattatgagtctactgag
actgtctctcaattcgagcacgtcaagacatggctaatgaaaaatgcgaagaagtatgtg
caggcagatcctccaaacaacaaagggctgtcacagctggtggtgcagctgttgcagttc
atggaagataattttggtccaaaggccagtaaggctcctatgactaaattgccgatgaaa
tacttcctggactttaaaactggtggtggactgtgtcacatactgagtacagtgtacaaa
ttcaagagcgaccagggttggcgcaggtttgacttccagtctccgtcccgaaaagatgcc
aatgttgagctcttccgtgagattgagaagagtttgctctctaataagtgttggagcaaa
ccaactgtcttcattcatggtgaagtagataaagaactgcgaaatgaactcaaagatatt
gtcaagcgacatgatggaaagattgttgatgaggaagaagaagcatctcacgttgtatat
gatgagcaggatccactagacgatgaatttgctagggctgtgatgcgtcgtgaccgacag
acactgttccatttttactacatgcctgattcttatgactcatgggcaccagctgtagaa
ttggattatgacactcctgaatcgccacagttttatgatggccagtggaaggtgtgtgcc
aattggctgcaagatttagaatcatacaatgaatggatgaatgaggaagattatgaggtt
gatgacagtggtactaagaaaaaacatcgtggttgcctgagtgttgatgacacaatgggc
ctcagtgatcctgataaaaagaagaaagccaagaaaagaccacgatcacccccatcaccc
cgttctaagaggaaaggatcacgcaacacgacgacaccaggcaaacccgttaaaaagact
aaaatggaagaagaagaagaagatctaactagggacatggaggacccagctcctgagcca
gctgtcacagaggtcacaaccggttccaaaatacagcctagtaaaggaggaaattacatg
gaccttgatgaggaggctgcagagaagacagaaaaaactgaaggaccgcccgttcctgat
agtgaggacactgcaactgaccaaactcatcacataattgttccaagctatgctgcctgg
tttgactacaatgccattcatgccattgagaaaagaggccttcctgaatttttcaatggc
aaaaataaatctaagacacctgaaatatatttggcctatagaaattttatgattgacact
tacagattgaatccaacagaatacttgacatctactgcatgccgtcgcaaccttgctggt
gatgtctgcgctgtgatgcgagtgcatgcgttccttgaacaatggggactgatcaattat
caggtggatgcagatgccagaccaactcccatgggaccaccaccaacttcccatttccac
gtgctagctgacactccagctggacttcagtctattaatcctccaaaggttaatcagcca
tctgcagcaaagcatctaatggattttgacaaaaagactactgataaaaaaccagatttc
agtattggtacagactttggattgaagcttgaccagtattctaaaaaaactggggctctc
aaaaataaatctgccgccagtcaagcccgagaatggacagagcaggaaaccttacttttg
ttggaggctcttgagatgtacaaagatgattggaacaaagtatgtgagcatgtaggcacc
agaacacaggatgagtgtatccttcaatttcttcgtctcccaattgaggacccatattta
gaagactctgaagtaggttctggaggatcaccaaatgcattaggtcctttagcctaccag
cctattcccttcagtaaatctggtaacccaataatgtctaccgttgcatttttagcgtcg
gtagttgatcctcgaattgcagcttctgctgctaaagctgcaatggatgaattttgcagg
atcaaggatgaggtacctgctgcccttcttgactctcacatcaaaaatgttgctgaccat
gcagcttctaatgagggaaaggtggatccaattgctggcttaggtaagtcaggtattgct
ggaactgaaccagaaggagaagaaaagaaggaaggtgaaacagaatctgaaaagaaagat
gatgcaaagaaggacggtgagaaaaaagatgaagaaaagaaagatgaaggtgataaagaa
aagaaagatgaagctatggaggttgataaaccagatgagaaaaaaacagaggagaaaaag
gagggagaagaagaggataaaaaggaagacaaggcagataccaaagaagaaaagaaagaa
gagatcagtcctgaagaaaagaagcttgatgcagagcgagaaaggttacggaaagatgcc
tccgtccagcaagcagccagtgctgctctaggttcagctgctgttaaagcaaaacattta
gccgcagttgaagagagaaaaataaagtccttggttgcattgctggttgaaacacaaatg
aagaagctagagatcaaactacgccactttgaggagcttgaaaccataatggatagggaa
cgagaaagtttggaactgcaacgccagcagttattgcaagagcgtcagcagtttcatctg
gaacagttaaaagctgctgagatgcgagctcgtcaacatgccttacatcagctaactcaa
ggggctagtcctgctcattcaccagctccatccatgacacaggtccatcagtag
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