Homarus americanus (American lobster): 121878304
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Entry
121878304 CDS
T07477
Name
(RefSeq) transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hame03000
]
121878304
03036 Chromosome and associated proteins [BR:
hame03036
]
121878304
Transcription factors [BR:
hame03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121878304
Chromosome and associated proteins [BR:
hame03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
121878304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
ADDz_Dnmt3b
HTH_Tnp_Tc5
Motif
Other DBs
NCBI-GeneID:
121878304
NCBI-ProteinID:
XP_042240341
LinkDB
All DBs
Position
Unknown
AA seq
3006 aa
AA seq
DB search
MEFFNMEEDPDGCSQQVAVIMTGQVYREAGLKHSKHPVVEGQLYDKLCQIGKHKLRDDVR
KMALSIALSVSDKEFQPTVAWLDNFMRRFCLSKKKMGFHSSAMLKQKGSKKPEVLGPPPS
SMSGLTQEDVFNALGINVDRGNVTNEEGTMDENSALMENGKSAEEIANGQNSFVEVNGEK
STDTNLQKEDNEPTAKIDENNTKDTTKDAEKTSAIVNDKIGRLRVTDIALLSYSTEQTSE
KPINLDSTSENEIEIYEYVKGDNSFTTDSANKTTSSSHSEKNEEMGNKNQILPDDKQGNE
EDMDCSIVNEIVKENEIELKEEENETKNKENEKESVEEGNKKDPLKESENEIESREEKEG
KDCENEKESVEERKAKNSKDMKNEIELMEEGEEEKEPDSSNDTENEETTSVTEGNDESTQ
SSDGKSEDENDIEQDGDEKQKDEGDKKTLRQQEDEKVNYSKEENKYYHKQKDELNKRLSG
SVVRCTSCNEQVNHQIRSLVHTHPVLGVFICKRCRKYYGKGRYCKDEEGYDEYCRLCAEG
GDLLCCEQEGCFNGFCKRCVKRTMGRSELKKVESTENWACYVCDPSPMTELRALHRTILS
NLTKSEEDDANMSRKELRTHKLKIKFDLLKRTRLERSFKEEPQEKSKTPKKKAVKKVKTE
PVASHSKLMEVIDNMSEMLSLCLNNVKTIKGRWQKGQYSEEATEKTGKRILKQLNALRSN
FELMENEVNDHLDKVPQGDCQNDESAGKDNEQAGGSNTENTSAKDLVAESVKKTGKGKKK
VPKESDDEKLKGKEDNKKRENRRSNRKQKKNVESDNDSQIQDDENDNSDENAENVKNSKS
EQAKSKEKPKESNEELMDMAEVPNTNVDLFRSDDEHSLPDLQDAIDDILSDGNSDIDGAL
EDGIDGGVDFDDIVGIKKENTEKSTKSNKNTEKEDDDDEKSERKQKLRLKSRGDGASNQE
GNLATEDNEDDDSSRLSKNTTSECVDSDDEPKKTRTSLRLQKVKDKPKDDEGGDVETEEE
ELNRKSSRRGYRRSNRRKTAKSNKAESEEEEEEKTSKDRKKSIKKKNREGEESEGDVETE
EEELNRKYGRRGFRRSNRKKCAKSDKAESEEDEEEEEEEEEVTSKDRKKSIRKKNLEGEE
SEDERKSRKGKAKAKSNRNDDDGVGSDDGGGDGNDDDDGGGGGGDDDDDAGNSDIDKKTK
KESKKDVKKIKKELKDGEEDGDDENKKVQKESKEEDDKKKIKQEPSKVDDKKKIKQEPEE
VNDKKIKQDPEEVNGDDVEGDDEHEGDDMENKDNQEKEEDDDDEEEEEEEEEEEEEEKEE
EKEEEKEGELGRKGKKKDEEKDEKLRKRRRQEKEENKKRKVKENGKNKKRRNKKEDDEGE
GKRKRKRRDVKKEVEDEDDDSQDRKKTDRRRSRRRKKDEDEDEDDIMLGLVEESSETSME
ENTDEEIRRRQEDREPMKKKKKRSPKKSSAGSGEEEEEETKKKKKNASKDSDEGSDKEDG
KDDEENKESSSEEQTKDKLKKVSKIKREKEEGDEMNLENEKALSTLLATDTDEEGKDKSG
VEKDDNTGSKKSVTETNDGENSEENVSEKKKKEKNASESSASETEKKENKLKKSEDIKSP
VKTDNQKAKAALLESESEDDLEDKPKPRCKKKNFRKKKSSSDNDGETNRQRIRRIRRALT
EEEQEELKVKQLESKCQVDMKDITPLVKEKLEEDDYIDVLDFPELYSPNRQMLDSDDCDA
DEEESDKEFSKLMKFKMNKIPKPAPKSKKKAVEPDTEEEEEDKEEDKKEDKGEGEVEGEG
EGEGEKKSSTKVNKEGDKKKKEGLLDISIDKEDDDDEEEEEEEEDDKKKKKSKKEGGMSL
NEKMKKQILMSSDEEGEDDDDEDDEDKPKNDAEEEEKERKKYEEKKKRKEEEKNKRGSGE
ESGGENVPKVYKGYMNLNISSDEDKGSDYEDDEEEEEEEEDDDDDSDFEESPRKKRAFQI
SSSDSEGDGKKKRKKATTTESDSEEDEDDKPKSKRKRIKKMTSSSDESGDEENKEDSPSK
HKKIRRVIRDEDLLETTKNATQEEEERRKRISERQKRYNQIFEVDVESDQKDLGKLVLDF
DPETKSELVSVHEKLVKFLKPHQFKGITFMWNATVESVEMMNSKPGSGCILAHCMGLGKT
LQVIAFVHTLMTNKKTARHVSKVMVCCPVNTVYNWVSEFTNWLKGKMLPFDVVELASAKD
LWGRAYRLDDWWREGGVCIIGYDMFRNLSNSKSKRYKGKMKEIFQRTLINPGPDLMVCDE
GHILKNEKTALSIAINQINTKRRIVLTGTPLQNNLKEYHCMIQFVKPNLLGTKKEFMNRF
VNPIEQGQCVDAMPRDVRRMKRRAHILHNMLEGCVQRFDYTVLKPFLPPKLEFVVSVQLS
DIQRQLYQYYLDNLAQGGPKRQGSGLFVDFGALSRVWTHPKVLELAVRRSLFQDDEEDMD
DFICDDTSTSESSDDERSRKKKKKGKKKKEEESEIEEEVVEGETEIPGPIHGLTESGKVK
VDWWKKVLEDIIGDDFDDEFFDKLEHSGKLVLLLDIVRECTSIGDKVLVFSQSLLALDMI
EDFLQLIDEGELELPQPEDPLPLPFKQWKKERDYLRLDGSSAPDARKNMCKFFNSSTNER
CRLFLISTRAGGLGINLVAANRVIIFDSSWNPSHDTQSIFRVYRFGQKKPCYVYRFVAQG
TMEEKIYSRQVTKMSTALRVVDEHQIKRYFKMDELAQLYEFTPSAITERETPIVPEDRLL
AELLKRQKDWIVNYHEHDSLLENQTSEELSEEERKAAWDDYENEKKGFLVQQQRNSVMPV
VGNAAMMTNPNLPSLSLSSFSFEGVVNTIKAQNPNLTQQEMCESVVLATKQIQKIHLNHY
QRVQSMVYNLKNPMIAPEQRKLLPFGNHPEMLPMLEQQLRMLEENIQRENQVINHMTQIT
PQRDQVSMANLMSAGLIRGQPASTGVTSATANYVGRPSNAGTSTMRPLQQNPPEQNPGSN
DVIMLD
NT seq
9021 nt
NT seq
+upstream
nt +downstream
nt
atggagtttttcaatatggaggaggatccagatggctgcagccaacaggtggcagttata
atgactgggcaggtgtaccgtgaagctgggttgaaacacagcaagcatcctgtggtggag
ggacagctgtatgacaaactatgccagattggtaaacacaaactgagggatgatgtccga
aaaatggcactaagtattgcactttcagtgtcagacaaagagtttcaaccaacagtagct
tggctagacaactttatgcgacgtttttgcctatcaaagaaaaaaatgggttttcacagc
tcagccatgttgaaacaaaagggttccaagaagccagaagtgctaggtccaccaccatct
agtatgagcggtctaacacaggaggacgtgttcaatgccctcggaataaatgtagatcgt
ggtaatgttactaatgaagaaggaaccatggatgagaactcagccttaatggaaaatgga
aagtctgccgaggaaattgccaatggacagaacagctttgttgaagtgaatggggaaaaa
tcaacagatactaatctccaaaaggaagataatgaacctacagctaaaattgatgaaaac
aacactaaagacactacaaaagatgcagaaaaaaccagtgcgattgtgaatgacaaaata
ggccgcctgagagttacagacattgctttattaagttatagtacagaacagactagtgaa
aaaccaatcaacctagacagtacaagtgaaaatgaaatagaaatttatgaatacgtgaaa
ggtgataactcatttacgactgattctgcgaataagacgactagcagttcacattcagaa
aagaatgaggaaatggggaataaaaatcaaatattgccagatgacaaacaaggaaatgaa
gaagacatggattgtagcattgttaatgaaatagtaaaggaaaatgagatagaattaaaa
gaggaagaaaatgaaacaaaaaataaagaaaatgagaaagaatcggtggaagaaggaaat
aaaaaagacccgttaaaagagtctgaaaatgagatagaatcaagggaggaaaaagaggga
aaagattgtgaaaatgagaaagaatcggtggaggaaagaaaggcaaaaaattcaaaagat
atgaaaaatgagatagaactaatggaggagggagaggaagaaaaagaaccggattcctca
aatgacactgaaaatgaagagactacttccgtcacagaaggaaatgatgagtccacccaa
agtagtgatggcaaatcagaagatgagaatgacattgaacaagatggagatgaaaaacaa
aaggatgagggtgacaagaaaacattaagacagcaggaggatgaaaaagtaaactattca
aaggaagagaacaaatattatcacaagcaaaaagatgaacttaataaacggctcagtgga
tcagtagtgcgatgcacatcttgcaatgaacaagttaaccatcagataaggtcattggtc
cacacacacccagttcttggagtcttcatttgcaagagatgccggaagtactacggcaaa
ggcagatactgcaaggatgaggaaggttatgacgagtactgccgcttgtgtgcagaggga
ggtgatcttctgtgttgtgaacaagaaggttgcttcaatggtttttgtaagcgttgtgtg
aaacggaccatgggtcgatctgagttaaaaaaagtagaatccacagaaaattgggcatgc
tatgtgtgtgatccatcacctatgacagaactacgagcccttcaccgtaccatcctgagc
aaccttacgaaatcagaagaagatgatgctaatatgtccagaaaggaactgaggactcac
aagctgaagattaaatttgacttgttaaagcgaacacgattggaaagaagctttaaggaa
gaacctcaagaaaaatcaaagacacctaagaagaaagcggtaaaaaaagtaaaaactgaa
ccagttgcttctcatagcaagctaatggaagtcattgataacatgtctgagatgttgtct
ttatgtcttaataatgttaagactatcaaggggagatggcaaaaaggacaatattccgaa
gaagcgacagaaaaaactggaaagcgtattttaaagcagttaaatgccttgcgttcaaac
tttgaattgatggaaaatgaagtgaatgatcatcttgataaggttcctcaaggagactgt
caaaatgatgagtctgctgggaaggataatgaacaagctggtggcagtaatacagaaaat
acatctgctaaggatttagttgcagaaagtgtcaaaaagactgggaaggggaaaaagaaa
gtacctaaggagagtgatgatgaaaagcttaaaggaaaggaagataacaagaagagggaa
aatcgtaggagtaatagaaaacagaaaaagaatgtagagagtgataatgacagccaaatt
caagatgatgaaaatgacaacagtgatgaaaatgcagaaaatgtcaagaattccaaaagt
gaacaagcaaagagtaaagaaaaaccaaaagaaagcaacgaagagctgatggatatggct
gaagtccctaatactaatgttgatctttttaggtctgacgatgaacattctcttccagat
cttcaagatgcaattgatgacatattaagtgatggaaacagtgatattgatggtgctcta
gaagatgggatagatggtggagtagattttgatgatatagttggaattaaaaaagaaaat
actgagaaaagcacaaaatccaacaaaaacacagagaaagaagatgatgatgacgagaaa
tcagagagaaaacaaaaactaagattaaaaagtcggggcgatggagcctctaatcaggag
ggcaatttggcgacagaagacaacgaggatgatgactcgtctcgattgtccaaaaacact
acatcagagtgtgtggatagcgatgatgaaccgaaaaagacaagaacttcattgagattg
caaaaagtcaaggacaaacccaaagatgacgaaggaggtgatgtggaaacagaggaagag
gaacttaataggaaatctagtagaagaggttataggagatccaacaggagaaaaactgct
aaaagtaataaagctgagagtgaggaagaggaggaggagaagaccagcaaggacagaaag
aagtctatcaaaaagaaaaatcgagaaggtgaggagagtgaaggtgatgtggaaacagag
gaagaagaacttaataggaaatatggtagaagaggttttaggagatccaacaggaaaaaa
tgtgctaaaagtgataaagctgagagtgaggaagatgaggaggaggaggaggaggaggag
gaggtgaccagcaaggatagaaagaagtctattaggaagaaaaatctggagggtgaagag
agtgaagatgagaggaagtctaggaaagggaaagcaaaagccaaaagtaacaggaatgat
gatgatggtgttggtagtgatgatggtggtggtgatggtaatgatgatgatgatggtggt
ggtggtggtggtgatgatgatgatgatgctggaaatagtgatattgataagaaaacaaag
aaagagtcaaagaaagatgttaagaaaataaagaaagaacttaaagacggagaagaagat
ggtgatgatgaaaataagaaagtacagaaagaatcaaaggaagaggatgataagaagaaa
attaagcaagagccaagtaaagtggatgataagaagaaaattaagcaagaaccagaggaa
gttaatgataaaaaaattaagcaagacccagaggaagttaatggtgatgatgtcgaggga
gatgatgaacatgaaggtgatgatatggaaaataaagataatcaagaaaaggaggaggat
gatgatgatgaggaggaggaggaagaagaagaagaagaagaagaagaagaaaaagaagaa
gaaaaagaagaagaaaaagaaggtgaacttggcaggaaaggcaagaaaaaagatgaagag
aaagatgagaagctgagaaagagaagaagacaagagaaagaagagaacaaaaaaaggaaa
gtaaaagaaaatgggaaaaataaaaagcgaagaaataagaaggaagatgatgagggagaa
ggcaaaaggaagagaaaacgtagagatgtaaagaaagaagtagaggatgaggatgatgac
tctcaggacaggaagaaaacagatagaagacgaagcagaagaagaaaaaaagacgaggat
gaagatgaagatgacattatgttgggacttgttgaggagagttcagaaacgtcaatggaa
gaaaacaccgatgaagaaattagaaggcggcaagaagacagggaacccatgaaaaagaaa
aagaaacgttcaccaaaaaagtcttctgcaggttcaggagaggaggaggaggaggagaca
aagaagaagaaaaagaatgcaagtaaggacagtgatgaggggagtgacaaagaagatggt
aaagatgatgaggagaataaggaaagttcttcagaggagcagactaaagacaagctcaag
aaggtaagcaaaattaaaagagaaaaagaagagggtgatgaaatgaacttggaaaatgag
aaagcattatccacattgttggcaactgacactgatgaagaagggaaagacaagtcaggg
gtagagaaagatgacaacacaggaagtaagaagagtgttactgaaaccaatgatggtgag
aactctgaggaaaatgtttcagaaaagaagaaaaaggagaaaaatgcgagcgaatcttca
gcatctgaaactgaaaagaaagagaacaaattaaagaaatccgaagatattaaatcacct
gtgaagacagacaaccagaaggcaaaagccgccctacttgagagtgaaagtgaagatgat
ctcgaggataaacctaaaccacgatgtaagaagaaaaactttagaaagaaaaagtcttcc
agtgataatgacggagaaacaaacaggcaacgcattagaaggattaggagggcacttacc
gaggaagaacaagaagaattgaaagtaaaacagcttgaaagtaagtgccaggttgacatg
aaggatattactccactcgtaaaagaaaaactcgaggaagatgattatattgatgtgctg
gacttcccagaattgtactcccctaacagacaaatgttagacagtgatgattgtgatgca
gatgaagaagaatccgacaaggaattctcaaaattaatgaaatttaagatgaacaaaata
ccaaaacctgctcccaaaagcaagaagaaggcagtagaacctgatactgaagaggaagaa
gaggataaggaggaggacaagaaggaagacaagggtgaaggagaggttgaaggagagggt
gaaggagagggtgagaagaaatctagtacaaaggtgaataaagaaggtgacaaaaagaaa
aaggaaggcttattagatattagtatagataaagaggatgatgatgatgaggaggaggaa
gaagaagaagaagacgacaaaaagaaaaagaagagtaagaaggaaggaggtatgtcactg
aatgaaaagatgaagaagcagatcctcatgagcagtgacgaggagggggaggatgatgat
gatgaagatgatgaagataagccaaaaaatgatgcagaggaggaggaaaaggagagaaag
aaatatgaagagaaaaagaagaggaaagaagaagagaagaacaaacgaggaagtggggaa
gagtctggtggtgagaatgttccaaaggtgtataagggatatatgaatttgaatatatca
tctgatgaagataaaggaagtgattatgaggatgatgaagaggaggaagaggaagaggaa
gatgatgacgatgacagtgactttgaggaatcgcccagaaagaagagagcattccagata
tcttcttcagacagtgaaggtgacggtaagaagaagagaaagaaggcgaccacaacagaa
tcagatagtgaggaagatgaggatgataaaccaaaatccaaaagaaaacgtataaagaaa
atgacttcatcttcagatgaaagtggtgatgaagaaaataaagaggattcaccaagcaag
cataaaaagattcgtcgggtaatacgagatgaagacctactggagaccaccaagaatgcc
acacaggaagaagaagagcgtcgaaaacgtatatcagagcgtcagaaacggtataaccag
atctttgaggttgatgtggaatctgaccagaaggatttgggtaaattagtcctcgacttt
gacccagaaactaagtctgagcttgtttctgttcatgagaaacttgttaaatttttgaaa
cctcaccagttcaaaggaataacgtttatgtggaatgcaactgtggagagtgtggagatg
atgaacagtaagcctggtagtggctgtatccttgcccattgtatgggtctaggtaaaact
ctgcaggtaattgccttcgtccacaccttgatgactaataagaagactgcaaggcatgta
tcaaaagttatggtctgctgcccggtcaatactgtttacaactgggttagtgaattcacc
aactggctcaaagggaagatgttgccttttgacgttgtggaacttgcttcagccaaagat
ttgtggggtagagcttatcggcttgatgactggtggcgggaaggaggtgtttgtattata
ggctatgacatgttccgtaacctctcaaacagcaagtccaagagatataaaggcaaaatg
aaagagatcttccaaaggacactaataaatcctggtccagatcttatggtttgtgatgaa
ggtcacatattgaagaatgagaagactgctctgtctatagcaatcaatcagattaacact
aaaagacgtattgtgcttactggtactcctctccaaaataatcttaaggaatatcactgt
atgattcagtttgttaaaccaaatctgcttggcacaaagaaggagttcatgaaccggttt
gttaatcccattgagcaaggccagtgtgttgatgcaatgcctagagatgtccggagaatg
aagaggagagctcatattcttcataacatgttagaggggtgtgtgcagcgatttgactac
acagtattgaagcctttcctgcctcccaagttagagtttgttgtgtctgtgcagttgtca
gatatccagcgtcaattgtaccagtattaccttgataacctggcccagggtggtcctaaa
cgtcaagggtcgggtctgtttgtggactttggtgctctctctcgagtatggactcaccct
aaggttctggaattggcagtcagaagatcattgtttcaggatgatgaagaggatatggat
gatttcatctgtgacgacacatcaacttcggaatcctcagatgatgaaagatcacgaaag
aaaaagaagaaaggcaagaaaaagaaagaagaagaatctgagatagaggaagaagtggtt
gaaggagagacagaaatacctggtcccatccatggattgactgaaagtggtaaagtcaaa
gttgattggtggaagaaggtgctggaggacattattggtgatgattttgatgatgaattt
tttgacaaactggaacacagtggtaaacttgtactgctgctagatatcgtacgagaatgt
acttctattggtgataaagtattagttttcagtcagagtctgttggctctggatatgatt
gaggacttcctgcagttgatagatgaaggggaattagagttaccacaacccgaagatcct
ctgcctcttccgttcaagcagtggaaaaaagaacgtgattacctacgtcttgatggctcc
tctgcacctgacgcgagaaaaaatatgtgcaaattcttcaacagctccaccaatgagaga
tgtcgactcttccttatctcaacacgagctggaggtctcggcatcaatctggttgctgca
aacagagtgatcatcttcgactcctcctggaacccatcccatgacactcaatccattttc
agagtctaccgttttggacagaaaaagccatgttacgtttaccgttttgttgcacagggg
accatggaggagaaaatctactctcgacaagtaacaaaaatgtcaacagccttacgagtt
gtggatgaacatcagatcaagcgctattttaaaatggatgaattagcgcagctgtatgag
tttactccgtctgccatcaccgagcgtgaaactcctattgtcccagaggatcggctattg
gcggaattgctaaaacgccagaaagattggatagttaattatcacgagcacgactcactt
ttggaaaaccaaacaagtgaagaactcagtgaagaagaacgaaaagcagcatgggatgac
tatgaaaatgaaaagaagggcttcttggtgcagcagcaaagaaacagtgtgatgcctgtg
gtgggtaatgcagccatgatgaccaatcctaatttgccatcactctctctctcatcattt
agttttgaaggtgttgttaacacaattaaagctcagaaccccaacttaacacagcaggag
atgtgtgagagtgtagtattagcaacaaaacagattcagaagatacatctcaaccactac
caacgtgttcaaagcatggtgtacaatctgaagaacccaatgatagcaccagagcagagg
aaactcttaccatttgggaatcatccagagatgcttcctatgttagaacagcaattgaga
atgctggaagaaaacatccaacgagaaaaccaagtcattaaccacatgacacaaatcact
ccacagagagaccaggtgtccatggccaatttgatgtctgcaggactgattcgtggtcag
ccagccagtacaggggttacttcagccacagctaattatgttggaagaccaagcaatgct
ggaacctccacaatgagaccgcttcagcaaaacccccctgaacagaatccgggatcaaat
gatgtgatcatgcttgactga
DBGET
integrated database retrieval system
