Helianthus annuus (common sunflower): 110877800
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Entry
110877800 CDS
T05101
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110877800
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110877800
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Defensin_big
Tetraspanin
Motif
Other DBs
NCBI-GeneID:
110877800
NCBI-ProteinID:
XP_021981703
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Position
1:129293173..129297196
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AA seq
452 aa
AA seq
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MAVPNKLFALTSFLLLMLLLATVVAAAVAVVHKNDASNPSTAETEKMQKQSIYNSSMEAR
LKEIEALNDNAVQDPEEIVSLVEMSMRNNTERRKLGYFSCGTGNPIDDCWRCDPNWHRNR
KRLANCGIGFGRNAIGGRDGRFYVVTDSRDDDPVNPRPGTLRHAVIQTAPLWIVFKRDMV
IQLKQELIMNSFKTIDARGVNVHIANGACLTLQFITNVIIHGLHIHDCKPTGNALVRSSP
SHYGWRSMADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMGSTAITISNNHFAHHNEVM
LLGHSDSYVRDKMMQVTIAYNHFGKGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANP
TINSQGNRYLAPVNPFAKEVTKRVNTDASKWHGWNWRSEGDLLLNGAYFTPSGAGASASY
ARASSLGAKSSNMVASITANAGVLSCRRGRQC
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacctaacaaactgttcgcactaacttcatttctgcttctcatgctgctgctt
gcgacggtggtcgccgccgccgtcgccgtcgtgcacaaaaacgacgcctcaaatcctagc
actgcggaaacggagaagatgcagaaacagagcatctacaactcatcaatggaagcaaga
ttaaaggagattgaagctttgaatgacaatgctgttcaagatcctgaagagatcgtctcc
ctcgttgaaatgagcatgaggaacaatactgagaggaggaagctagggtatttctcatgt
gggaccggtaaccctatcgatgactgttggcgatgcgacccgaattggcatcgcaaccgt
aagcgccttgccaattgcggtattgggttcgggcggaacgcgataggaggccgtgacggt
cggttttacgtggtgactgattcccgagacgatgacccagtcaacccgcgacctggcacc
ctgcgtcacgctgtcatacaaaccgctccactctggatcgtgttcaaacgtgacatggtg
atccaactaaagcaagaacttatcatgaacagttttaaaaccatcgatgcgcgtggagta
aacgtccacatagctaatggagcttgcttaactcttcagttcattactaatgttattatc
catggtttacatattcatgactgtaagcccaccggtaacgcgctggttagaagctcacca
tcccactacggttggagatcaatggctgatggtgatgccatttcaatattcggctcgagc
catatttggatcgaccacaactctctttctaactgtgccgatggactcgttgacgcagtc
atgggctcaaccgctatcaccatttccaacaaccactttgctcatcacaacgaggtgatg
ttattgggccatagtgactcgtacgtaagagacaagatgatgcaagtgactattgcgtat
aaccattttggtaaaggtttaattcagagaatgccaagatgtagacacgggtatttccat
gtagtgaacaatgactacactcattgggagatgtatgccattggtggaagtgcaaacccc
acaatcaacagtcaaggaaacagatatcttgcacctgttaatccttttgcaaaagaggtt
acaaagagggtgaatacagatgcaagtaaatggcatggatggaactggaggtcagaaggt
gatttacttctcaacggggcgtatttcaccccatcgggggctggtgcatcggcaagctac
gccagagcctcgagtttaggggcgaaatcgtctaacatggttgcttccattactgccaat
gctggtgttcttagctgtcgtaggggtcgccaatgctag
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