Helianthus annuus (common sunflower): 110912098
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Entry
110912098 CDS
T05101
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03013
Nucleocytoplasmic transport
han03015
mRNA surveillance pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110912098
09122 Translation
03013 Nucleocytoplasmic transport
110912098
03015 mRNA surveillance pathway
110912098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110912098
03041 Spliceosome [BR:
han03041
]
110912098
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110912098
Spliceosome [BR:
han03041
]
Complex C
Other components
EJC/TREX
110912098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
110912098
NCBI-ProteinID:
XP_022012462
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All DBs
Position
15:complement(105280264..105289306)
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AA seq
700 aa
AA seq
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MSSPYVVLENRPLDQWKVTELKEELKKRNLITKGLKDDLVKRLDEAIRTELDEANQTHSN
GVSDIEKPDDTNAKSENLEDDNKTEKLDINESLEKDKVTEKLDINESSEKDKMAEKLDVN
ESLEKDNTTENLDDENNDKVDGLQSLDTKLDHGTISTSTEGVQVVEKVSMEASVTVTDTN
KIEVHAEDGESKPDVTPSSDVGSRVVEVSEVKSDSISIDTMSGTEKIELKDNVIAADGDV
KVELDVKPEMSFGKVVSDDGKTESVVVNAVVPTDKKDVSIAESGDVGSPEKLNLDRSSGD
DSMEEDALESKQIEPVDVMVEDTPAAKITECTKENSDPAVRPIKRKLHDQEAATNSEVVK
RQRMLNSQQQTTNSSVSTTPMRHRFLKSDSSVSHEEPKERVVPPSSMSPTTSLRIDRFLR
PFTLKAVQELLGKTGTVVSFWMDQIKTHCYVTYSSVEEAIETRNAVYNLQWPTNGGRLLI
AEFVDPSEVKTRTEAPLPSPVPPPLQAARPATKPPPPAAKKPQTPAATKPPPQTQLPPPP
PLPLPPPPPLSRDSRPLQSQQPAVALPPPPPLPERMEPPVVTLDDLFRKTKATPRIYYLP
LSEEQVAAKLKRSGNQSAGRKEASEQKRKSSFCDRFRTLGGLPICLRPICLNSIKTHIRF
RLLAPSSKTLINACFCFERSHLISIANFKSKSFIVYTFTW
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaccgtatgttgtccttgaaaatcgcccccttgatcagtggaaagtaaccgag
ctaaaggaagaactcaagaaaagaaacctaataaccaaaggtctaaaagatgatctggtt
aagaggttggatgaagctattcgtaccgaactggatgaggctaaccaaactcatagcaat
ggtgtcagtgatattgaaaagcctgatgacaccaatgccaaaagtgagaacctagaggac
gataacaagactgagaagttggatattaacgagagcttagagaaagataaggtgactgag
aagttagatatcaacgagagctcagagaaagataagatggctgagaagttggatgttaat
gagagcctagagaaagataacactacagagaatctggatgatgaaaacaatgataaggtc
gatggtttgcagtcattggacacaaaactggatcatggcactatttccacaagcacggag
ggagttcaggtagttgagaaggtttccatggaagcttctgttacagtcactgataccaac
aagatcgaggtgcatgcagaggatggagagtcgaagcctgacgtaacgccatcttctgat
gttggtagccgggtagttgaggtcagcgaagtaaaatctgattctatttctattgatact
atgtcaggtactgaaaagattgaactaaaggataatgtaattgctgctgatggtgatgtc
aaagtagaacttgatgttaagcctgagatgtcattcggtaaagttgtctctgatgacggc
aaaacagaatcagttgtagtcaatgccgtcgtccctactgacaagaaagatgtcagtatt
gctgaaagtggagatgtcggttcgccagagaagttaaatttagaccgaagctctggtgat
gattcaatggaggaggatgcattagagagtaaacaaattgagcctgttgatgtcatggtt
gaggatacacctgctgccaagattactgaatgtactaaagagaacagtgatcctgctgtg
aggcccataaaaagaaagcttcatgatcaagaagcagcgacaaacagcgaggtggtaaag
cggcagcgcatgttgaattctcaacagcaaactactaattcatctgtctctactacacct
atgaggcacaggtttttgaagtctgattcttcagttagccacgaggagccaaaggaacgt
gttgttccgccatcgtcaatgtctccgaccacttcccttagaattgatcgttttctgcgt
ccgttcactctaaaggctgtgcaagaacttcttggcaaaacgggtacagttgttagtttc
tggatggatcaaatcaaaactcactgttatgttacttattcatcagtcgaagaagctata
gagactcgaaacgctgtgtacaacctccaatggccaacaaacggaggccgtctgcttata
gctgagtttgtggatccatcagaggtgaagactcgaactgaagctccattaccatctcca
gtacccccaccacttcaagccgccaggcccgccacaaaaccaccacctccagccgccaaa
aaaccacaaactccagccgccacaaaaccaccaccgcaaacccagcttcctcctccaccc
ccgctcccacttccacctccaccaccattgtctcgtgactctcgtccactgcaatcacaa
caaccagcagtagctcttcctccacctcccccgctccccgagagaatggaacctccggtt
gtgacgttggatgatctgttccgaaagacgaaagcaacccctcgcatctactacctgccg
ttgtcagaggagcaagttgcggcaaaactgaagagaagtggaaaccagtctgcaggtagg
aaggaagcgtcggagcagaaaaggaagagctcattttgtgatagatttagaactcttgga
ggactccccatttgtttaagacccatatgccttaattccataaagactcatatccgcttt
cgtttacttgcaccgtcatctaaaacattgataaatgcttgcttttgttttgaaagatca
cacctcatttcaatcgcaaacttcaaatcgaaatccttcatcgtttacacatttacatgg
taa
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