Helianthus annuus (common sunflower): 110921181
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Entry
110921181 CDS
T05101
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110921181
Spliceosome [BR:
han03041
]
Complex A
Other components
Complex A specific factors
110921181
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
RRM_1
KH_1
zf-CCHC
eIF3g
RRM_5
PHD_4
zf-CCHC_2
Nup35_RRM
Motif
Other DBs
NCBI-GeneID:
110921181
NCBI-ProteinID:
XP_022021154
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Position
17:50225588..50231520
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AA seq
722 aa
AA seq
DB search
MDSLQSETLTPHTTDPAPPPSDPLPDQPTNNGNTAAADPSDTTSRRRRRSRWDPPPADGD
SDNNGVKKRKSRWADDEPKPVFQLPDFMKDFTGGMDMDPEIQALNARLMEISRILQSGQQ
LDDRPEGARSPSPDPVYDNMGTRINTREYRARERLNRERQEIISQIIKRNPAFKPPADYR
PPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRFGQKR
DLKFDPSENEDLHVLVEAETQEGLDAAAGMVEKLLHPVDEGLNEHKRQQLRELAALNGTI
RDDEYCRLCGEPGHRQFACPSKLSTFKSDVLCKICGDGGHPTIDCPMKGTGGKKMDDEYQ
NFLAELGGTLPEGVSRQSTPLAIMGASGSNPPWAAGSSSNGSSTGVSAHPGLGSTAAKIG
TGFGLGFGKEIDDTNLYIGYLPPTFEDDALIRLFSPFGEIVMAKVIKDKITGLSKGYGFV
KYSDVAQANQAIASMNGYRLDGRVIAVRVAGKPPQPTVPPGPPTLAPAAPVPAYAGAGGY
PSQQMASGGPVGSAGPPGSYITAPVPWGPPPPGPPPPPYASYAQPPPPPPPGSNVYSSYP
GPHIPSYGVQYPPPNSSSTETQQSYSSGLHSQSTAPVQSPASNVYGSSMVGTTPNPQSAY
PSASMGYSSYYSVPPPPPPATEQPSFARAPWSSNPPVSSAEQTQQTAYGAESEYEKFMAE
MK
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggattctctccaatccgaaaccctaaccccacacaccaccgatcccgcaccaccaccg
tctgatccactcccagatcaacccaccaacaacggcaacaccgctgcagcagacccctcc
gacaccacaagccggagacggcgtcgcagccgctgggacccaccacccgccgacggagac
tccgataacaacggcgtcaaaaagcgtaagtctcgttgggccgacgatgagcccaaaccc
gtcttccagttaccggatttcatgaaggatttcaccggaggtatggatatggaccctgaa
attcaagcgcttaatgctaggttaatggaaattagtagaattttacaatccggtcaacag
ttagatgaccgacccgaaggtgctaggtcaccctcacccgacccggtctatgataatatg
ggaactagaataaatacacgagagtatagggctagagaaaggttgaatagagagagacag
gagattatttcccagatcattaaacgaaacccggcgtttaaaccgcctgcggattatcgc
ccgcctaagcttcagaaaaagttatatattccgatgaaggagtatccggggtataatttt
atcgggcttattattgggccgagggggaatacgcagaaacggatggagaaagagacaggt
gcgaaaattgtgatacgtgggaaaggttcggtgaaggaagggaggtttgggcagaaacgg
gatttgaagtttgacccgtcggagaatgaggatttgcatgtgcttgtggaggccgagacg
caggaggggttggatgcggcggcggggatggtggagaagttgttgcatccggttgatgaa
gggttgaatgagcataaacggcagcagttgagggagcttgctgcgttgaatgggacgatt
agggatgatgagtattgtaggttgtgtggggagccggggcatcggcagtttgcttgtccg
tcgaagttgtcgacttttaagagtgatgttttgtgtaagatatgtggtgatggggggcat
ccgactatcgactgtccgatgaaagggactggtgggaagaaaatggatgatgagtatcag
aattttttggcggagcttggtgggacgcttccggagggtgttagtaggcaaagcacaccg
ttggctattatgggtgcttccgggagcaatcctccatgggcagccggtagcagttcaaat
ggaagcagcaccggtgtttcggcacaccctggtcttggaagcactgcagcgaaaattgga
acgggatttggtcttggatttggtaaagaaatagatgatacaaatctgtacattgggtac
ctccctccgacttttgaagatgatgctttgatcagattgttttctccttttggggaaata
gtaatggcaaaggtgattaaagataagatcactgggctgagcaaagggtatggctttgta
aagtattctgatgtagctcaggctaatcaagcaattgcgagcatgaacggttatcgttta
gacggaagagtaattgcagtaagagttgcggggaagccaccgcaacctacagtaccccct
ggtcctcctactctggctcctgcagcacctgtgccagcttatgctggtgctggcggatac
ccgtctcagcagatggcgtcaggcggacccgttgggagtgctggacctcctgggagctat
atcactgcaccggttccttggggaccaccgccaccaggcccaccacctccaccttacgct
tcttatgctcaacctcctcctccaccaccacctggatcaaacgtgtattcatcctaccca
ggtccacatataccgtcttatggtgttcaatatccacctccgaacagttcatccactgaa
acccagcaaagctactcaagtggattgcattctcagagtacggctcctgtacaatcgcct
gctagtaatgtttatggcagttcgatggttgggacgacgccaaacccgcaaagtgcatat
ccttcggcgtccatgggttactcttcttattacagtgtacctcctcccccaccgcctgcg
actgagcagccaagttttgctagggcaccatggtcttcaaacccgcccgtttcttctgca
gagcaaactcaacaaaccgcttatggtgcagagtcagagtatgaaaagtttatggctgag
atgaaatga
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