Helianthus annuus (common sunflower): 110926542
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Entry
110926542 CDS
T05101
Name
(RefSeq) protein transport protein SEC13 homolog B
KO
K14004
protein transport protein SEC13
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03013
Nucleocytoplasmic transport
han04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110926542
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110926542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110926542
04131 Membrane trafficking [BR:
han04131
]
110926542
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110926542
Membrane trafficking [BR:
han04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
110926542
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110926542
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
110926542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
110926542
NCBI-ProteinID:
XP_022026017
LinkDB
All DBs
Position
17:189601289..189604302
Genome browser
AA seq
302 aa
AA seq
DB search
MPAQKIETGHTDTVHDVCMDYYGKRVASASSDATIKIIGVSNNSTSQHLTTLTGHNGPVW
QVTWAHPKFGSLLASCSYDSTVIVWKEGNPNEWTQLHTFSDHKSSVNSIAWAPHELGLCL
ACGSSDGNITIHTARSDGGWDTTRIDQAHPVGVTSVSWAPSMAPGALVGSGGAFEPVQKL
ASGGCDNTVKVWKLSNGIWKMDCFPALQMHSDWVRAVAWAPNLGLPKSTIASASEDGTVV
IWTVGKEGDNWNGKVLYDFKVPVWRVSWSLTGNILAVAAGGNNVTLWKEAVDGEWQQVTT
VD
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgccggcacaaaagattgaaacgggtcacacagacactgtccacgatgtatgcatggat
tattatggaaaacgagtggcatctgcatcctctgatgccaccatcaagataatcggtgta
agcaacaactctacttcccagcacttgaccactttgaccggtcacaacggtccagtatgg
caggtcacgtgggcccaccccaaattcgggtcacttctagcatcgtgttcttatgattca
accgttatagtttggaaggaaggtaacccaaacgagtggacccaactccatacttttagc
gaccataaatcttcggtcaactctatcgcctgggccccacacgagcttggtctctgtttg
gcttgtggctcttctgatgggaacattaccattcataccgccaggtcagatggtgggtgg
gacaccacacggattgaccaggctcacccagttggagtcacctcggtttcgtgggcccca
tcgatggctcccggggctctggttggatctggtggtgcttttgaacccgttcaaaagctg
gcttctggtgggtgtgataacactgtaaaagtatggaagctatctaacgggatctggaaa
atggactgttttcctgctttacaaatgcacagtgattgggttcgtgctgtcgcgtgggcc
ccaaacctgggacttccgaaatcaacaatcgcaagtgcttccgaggacggtacagttgtg
atatggaccgttggtaaagaaggtgataactggaatggtaaggttttgtatgattttaag
gtccccgtttggagggtatcttggtctttaaccggaaatattttggcggttgctgctggc
ggtaataatgttactttatggaaagaagctgttgacggagaatggcaacaggtaaccacc
gttgattag
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