Haloplanus rubicundus CBA1112: DU484_02470
Help
Entry
DU484_02470 CDS
T05557
Name
(GenBank) Hef nuclease
Organism
haq
Haloplanus rubicundus CBA1112
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Helicase_C
DEAD
RNA_helicase_helical
ResIII
HHH_2
HHH_5
HHH
DprA_N
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AXG08816
UniProt:
A0A345E9E4
LinkDB
All DBs
Position
312611..315043
Genome browser
AA seq
810 aa
AA seq
DB search
MAATDDGQAYVDHPLLEPGFIEQRRYQLQLAADARESHTLVCLPTGLGKTTVSLLVTADR
LHEVGGTALFLAPTKPLVQQHADFYREALSIPDDEITVFTGEVRPDDRAALWAESRIVIA
TPQVVENDLIGGRISLSDVTHLTFDECHRATGDYAYVYIAERYHADAEAPLVTGMSASPG
GDEEAILTVCENLGLSEVAVMTEDDADVADYTHDTEVEWERVTLPEPVLEIRDAINEVIT
DRLSQLKDLGVTNKTSPDLSQRDLNSMRGQLQDLIDADQSEGYEGMSIHAEVMKLRRAVE
LAETQSVESLRRYFERQRNAARASGAPKASQRLVSEPKVREAMRKAEAFDDLHPKFRQTR
VLLAQTLGIGGGERVIVFTESRDTAEALTDFLSESFDTRRFVGQGDKEGSDGMTQTEQGE
TLDAFRNGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQRKGRTGRQDEGRVIV
LMAEDTRDEAFFWISRRREQEMEDELKELKGVADEVEAELDDSQTALDSFDGAASADVET
NGDTATEADGGAAAQPGLADFGTATEDGDAEATDENGDAETDDAVVATAGTEEDDEVEIV
VDQRELDSAIARDLSTREGMATRLETLAVGDYVVSDRVAIERKTVSDFLDTLTGGDRSLF
EQVGDLSRHYARPVVLIEGDGLYEERNVHPDAIRGALASLTVDFGVSVLRTEDEGDTADL
LAVLAGREQTTRDRAVSVHGEKSSKTLAEQQEYVVGAIADIGPVTARSLLEHFGSVEAVM
TAREEDLLAVDGVGEVTADRIRDVVGSEYR
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaccgacgacgggcaggcgtacgtcgatcatccgctgctcgaaccgggcttc
atcgaacagcgacggtaccagctccagctcgcggccgacgcccgcgagtcgcatacgctg
gtctgtctgcccaccggcctgggcaagacgactgtgagcctgctcgtgaccgccgaccgc
ctgcacgaggtgggcggcacggcgctctttctcgcgccgacgaaaccgctcgtccagcaa
cacgccgacttctaccgcgaggccctctcgattcccgacgacgagattacggtctttacc
ggcgaggtgcggccggacgaccgggccgcgctgtgggcggagagtcgcatcgtcatcgcg
acgccgcaggtggtcgagaacgacctgatcggcggtcggatctccctgtcggacgtgacc
cacctgaccttcgacgagtgtcaccgcgccaccggcgactacgcctacgtctacatcgcg
gagcgctaccacgccgacgccgaggcgccgctcgtcaccggcatgagcgcctcacccggc
ggcgacgaggaggccatcctcaccgtctgtgagaacctcggcctgagcgaggtggcggtg
atgaccgaggacgacgccgacgtggccgactacacccacgacaccgaggtggagtgggag
cgggtaaccctgcccgaaccggtactggagatcagggacgccatcaacgaggtcatcacc
gaccggctgtcgcagttgaaggacctcggcgtcaccaacaagacgagccccgacctctcc
cagcgcgacctcaattcgatgcgtgggcagttacaggacctcatcgacgccgaccagtcg
gaggggtacgaggggatgtcgatccacgcggaggtgatgaagctccgtcgtgccgtggaa
ctcgcggagacgcagtcggtggagtcgcttcgccgttacttcgaacgccagcgcaacgcc
gcgcgcgcctccggggcgccgaaggcgagccaacggctcgtctcggagccgaaggttcgg
gaggcgatgcggaaggccgaggcgttcgacgacctacaccccaagttccgacagacgcgc
gtcctcctcgctcagaccctcggaatcggcggcggcgagcgcgtcatcgtcttcaccgaa
tcccgcgacaccgccgaggcgctgaccgacttcctgagcgagagcttcgacacccggcgg
ttcgtcgggcagggcgacaaggaaggctcggacgggatgacccagaccgaacagggcgag
acgctcgacgcctttcgaaacggcgagttcgaggtgctggtctccacctccgtcgcggag
gagggcctggacgtgcccgaggtggacctcgtcctcttctacgaacccgtccccaccgcg
atccggtcgatccagcggaaggggcggacgggccgacaggacgaggggcgggtgatcgtc
ctgatggccgaggacacccgcgacgaggccttcttctggatctcccggcggcgcgaacag
gagatggaggacgaactgaaggaactgaaaggcgtcgccgacgaggtggaggcggaactc
gacgactcccagacggcactagactcgttcgacggcgcagcgagtgctgacgtcgagacg
aacggcgacacggcgaccgaagcggacggtggcgcggcggcgcaaccggggctggcggat
ttcgggacggcgaccgaggacggcgacgcggaggcgaccgacgagaacggggacgccgag
acggacgacgccgtcgtcgccaccgcggggacggaggaagacgacgaggtggagatcgtc
gtcgaccagcgcgaactcgactcggccatcgcgcgtgacctctcgacccgcgaggggatg
gcgacgcggctggagacgctcgcggtgggcgactacgtcgtctcggaccgcgtcgcaatc
gagcgcaagaccgtctccgacttcctcgacaccctcaccggcggcgaccgctcgctgttc
gaacaggtgggcgacctctcccgacactacgcccgcccggtcgtcctgatcgagggcgac
ggcctctacgaggagcgcaacgtccaccccgacgccatccggggcgcactggcgtcgctc
accgtcgatttcggcgtgagcgtcctgcggacggaggacgagggcgacaccgcggacctc
ctcgcggtgctcgccggccgggagcagacgacccgcgaccgcgccgtgagcgtccacggg
gagaagagttcgaagactctagccgaacagcaggagtacgtcgtcggcgccatcgccgac
atcggcccggtgacggcgcggtcgctgctcgaacacttcgggagcgtcgaggccgtgatg
acggcccgcgaggaggatctgctggcggtcgacggggtcggcgaggtcaccgccgaccgt
atccgcgacgtggtgggcagcgagtaccgctaa
DBGET
integrated database retrieval system