Herminiimonas arsenicoxydans: HEAR3276
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Entry
HEAR3276 CDS
T00490
Name
(GenBank) Putative RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
har
Herminiimonas arsenicoxydans
Brite
KEGG Orthology (KO) [BR:
har00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
har03021
]
HEAR3276
Transcription machinery [BR:
har03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HEAR3276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
DUF134
HTH_23
HTH_24
GerE
Xre-like-HTH
HTH_20
Motif
Other DBs
NCBI-ProteinID:
CAL63383
UniProt:
A4GA46
LinkDB
All DBs
Position
complement(3237939..3238445)
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AA seq
168 aa
AA seq
DB search
MQDERDRLIACIPRLRRYARALIGERTGADDLVQDTMERGWKKLSSWQRGSDMRAWLFGI
MHNLHIDQVRRPGIMTEVLDDDTPLPTSKATQADGLEMRDLQSALATLPPEQREILLLVA
LEEMSYEEVATTLGLPLGTVMSRLSRARQKLRAHMEGRTVVLPLKVVK
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatgaacgcgatcggctgattgcgtgcatcccgcgcctgcgtcgttacgcccgt
gcgctgatcggtgagcgcacgggcgccgacgatctggtgcaggacacgatggagcgcggc
tggaaaaagctgtcgtcatggcagcgcggcagcgatatgcgcgcgtggctgttcggcatc
atgcacaacctgcatatcgatcaggtgcgtcgcccgggcatcatgacggaagtactggat
gacgacacgccgctgccgacgagcaaggcgacgcaagccgatggtctggaaatgcgcgat
ctgcaatccgcactggcgaccttgccgcccgagcagcgggaaatcctgttgctggtggcg
ctggaagaaatgtcttatgaagaagtggcgacaacactcggtttgcctctgggtacagtg
atgtcgcgtctgtcgcgcgcgcggcaaaaattgcgcgcacatatggaagggcgaactgtc
gtgttgccattaaaggtagtcaaataa
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