Halorhabdus sp. SVX81: SVXHr_0189
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Entry
SVXHr_0189 CDS
T09281
Name
(GenBank) ATP-dependent DNA ligase
KO
K07468
DNA/RNA ligase [EC:6.5.1.-]
Organism
hasv
Halorhabdus sp. SVX81
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SVXHr_0189
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GFIT
Motif
Pfam:
Lig_C
RNA_ligase
Porin_5
Motif
Other DBs
NCBI-ProteinID:
WEL16374
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Position
complement(210542..211663)
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AA seq
373 aa
AA seq
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MDEDRDWAAVLGVRSAEVDSVLEAFEESVFKGRRYRHLSAARHGIERGTVIVDGTVVRGF
PSIPRTLVLDPGIAEHFDGRVTIEEKRNGYNVRVARIDGDVLGFTRSGYICPYTTSKVRE
LLDPDSFFDANPERMLCGELIGPENPYTPHEYPTVESAAFEVFDVRDRETGRPLTVDHRR
ELCARHDLATVPEFGEYDPAEAAEAVREVIDDLDREGKEGVVLQSMDGTRQLKYTTSATH
QADLEHAFSLPFDYGRDFVFPRVLREVFQAVELDRTKGESRQRAQELGEAILLPAVETVR
AVERGETVGEEHTVRDDPAVIEALLSHLRDMGIELEIQQDRDESGERVVSFVKVSQSTRD
NVENYLDGQLIDE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggatcgcgactgggcggcggttctcggcgtcaggagtgcggaagtcgattcg
gtcctggaggcgttcgaggagagcgtcttcaaggggcggcgctaccgccatctctcggct
gcccgccacgggatcgagcgtggaaccgtgatcgtcgacgggaccgtcgtccggggattt
ccgtcgatcccgcgaacgctggtgctcgacccggggatcgccgagcacttcgacgggcga
gtcacgatcgaggagaagcgcaacggctacaacgtccgcgtcgcccggatcgacggcgac
gtcctggggttcacccggagcggatacatctgtccgtacaccaccagcaaagtcagggag
ctactcgaccccgactcgtttttcgacgccaatcccgagcgcatgctctgtggggagttg
atcggcccggagaacccctacacgccacacgagtatcccacagtcgagtcggctgccttc
gaagtgttcgacgtccgtgaccgagagacgggccggccattgacggtcgatcaccggcgg
gagctctgtgcgcgccacgatctggcgacggtccccgagttcggcgagtacgatccggcg
gaggcggccgaggccgttcgcgaggtgatcgacgacctggaccgtgagggcaaagaaggg
gtcgtgctgcagtcgatggacggtacccggcagctgaaatacacgacatcggcgacgcat
caagctgatttggaacacgcgttctcgctccccttcgactacgggcgggacttcgtcttt
ccgcgggttctccgggaggtgttccaggccgtcgagctggatcgaacgaagggtgagtcc
cgccagcgagcccaggaactcggggaagcgatcctcttgcccgcggtcgaaaccgtcaga
gcggtcgagcgcggcgagactgtgggggaggaacataccgtccgggacgaccctgccgtg
atcgaggcactcctctcgcacttgcgggatatgggcatcgagctcgaaatccagcaggac
cgagacgagagcggcgagcgcgtcgtctcgttcgtgaaagtatcacagtcgacccgtgac
aacgtcgaaaactatctcgacggacagttgatcgacgagtga
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