Halorubrum sp. 2020YC2: KI388_06420
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Entry
KI388_06420 CDS
T08040
Name
(GenBank) tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
hazz
Halorubrum sp. 2020YC2
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hazz03016
]
KI388_06420
Enzymes [BR:
hazz01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
KI388_06420
Transfer RNA biogenesis [BR:
hazz03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
KI388_06420
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Motif
Other DBs
NCBI-ProteinID:
QWC20570
UniProt:
A0A8E8EYZ4
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Position
complement(1300524..1302248)
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AA seq
574 aa
AA seq
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MSTDAAGDAAAEAESDDADSEAFVRTCEHLVDRILAGEIERDDLERAKLDACSEFGSPKV
PKNTEILDHAPAEARDDVIEVVQRKPVRTASGVSPVAIMTSPELCPHGKCLYCPGGPASE
FSSAQSYTGHEPAAARGEQNDYDPYGQVTLRLEQLRKIGHPVDKVELILMGGTMTARSHD
YQEWFVKRALQAMNDYDLNKEPEPAEGESFAPAPEETSFEYLEDVIAENETNAIRNIGTT
FETKPDWCDPEQIDRMLDLGGTKVEVGVQTTYERINREMHRGHGNEASRNANRRLRDAAF
KVGFHMMPGQPGMTREMCLEDFRQLFDNPDWRPDYLKIYPTLVVEGTRVYDRWRREDFDP
LTSEEAADVVAEVMDLIPKYTRLQRVQRDIPADFIDAGVQKSNLRQLAAQRAEEKGIVQR
DIRAREVGHNDADPDPDDVELSVTTYEAGGGTEHFLAFEDPVRDLLVGFCRLRFPSFAPD
QPGAPGTESDPIRPELEDAALVRELHVYGNEVGIGGDGDWQHQGYGTELLERAEELAREA
GYRKIAVISGIGAREYYRNKLGYRQDGPYVSKRI
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgacgcggcaggtgacgcggccgccgaagcggagtccgacgacgccgactcc
gaggcgttcgtccgcacctgcgagcacctcgtcgaccgcatcctcgcgggcgaaatcgag
cgcgacgacctcgaacgcgccaagctcgacgcctgctcggagttcggctccccgaaggtg
ccgaagaacaccgagatactcgaccacgcgcccgccgaggcccgcgacgacgtgatcgag
gtggtccagcgcaagccggtccggaccgcctcgggcgtctcgccggtcgcgatcatgacc
tcgccggagctgtgcccgcacggaaagtgcctctactgccccggcggcccggcctcggag
ttctcctcggcgcagtcgtacacgggccacgagccggccgccgcccgcggcgagcagaac
gactacgacccgtacggacaggtcaccctccggctcgaacagctccggaagatcggccac
ccggtcgacaaggtggagctcatcctgatgggcgggacgatgaccgcgcgctcgcacgac
taccaggaatggttcgtcaagcgcgccctccaggccatgaacgactacgacctcaacaag
gagccggagccggcggagggcgagtcgttcgcgcccgcccccgaggagacttcgttcgag
tacctcgaggacgtgatcgcggaaaacgagacgaacgcgatccgcaacatcggcaccacc
ttcgagacgaagccggactggtgtgacccagagcagatcgaccgcatgctcgacttgggc
gggacgaaggtcgaggtcggcgtccagaccacctacgagcgcatcaaccgcgagatgcac
cgcgggcacggcaacgaagcgagccggaacgccaaccgccgcctccgcgacgccgcgttc
aaggttggcttccacatgatgcccggccagccggggatgacccgggagatgtgtctagag
gatttccggcagctgttcgacaaccccgactggcgccccgactacctgaagatctacccc
accctcgtcgtcgaggggacccgggtgtacgaccgctggcgccgcgaggacttcgatccg
ctgacgagcgaggaggcggccgacgtcgtcgcggaggtcatggacctcatcccgaagtac
acgcggctccagcgggtccagcgcgacatccccgcggacttcatcgacgccggcgtccag
aagtcgaacctccgccagctcgcggcgcagcgcgccgaggagaaggggatcgtccagcgc
gacatccgcgcccgcgaggtcggccacaacgacgccgacccggacccggacgacgtcgaa
ctctcggtcaccacctacgaggccggcggcggcacggaacatttcctcgccttcgaggac
cccgtccgcgacctcctcgtcgggttctgtcgcctgcggttcccctccttcgcgcccgac
cagcccggcgcgccgggcaccgagagcgacccgatccgtccggaactcgaagacgccgcg
ctggtccgcgagctacacgtgtacggcaacgaggtcggcatcggcggcgacggcgactgg
cagcatcaggggtacgggactgagctcttagaacgcgcagaggaactggcccgcgaggcc
ggctaccggaagatcgcggtcatctcgggtatcggcgcccgcgagtactaccggaacaag
ctcggctaccgacaggacgggccgtacgtgtcgaagcggatctga
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