Halomonas binhaiensis: E4T21_17400
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Entry
E4T21_17400 CDS
T08791
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
hbh
Halomonas binhaiensis
Pathway
hbh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E4T21_17400 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbh03400
]
E4T21_17400 (recB)
Enzymes [BR:
hbh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E4T21_17400 (recB)
DNA repair and recombination proteins [BR:
hbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E4T21_17400 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
AAA_11
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QEM83119
UniProt:
A0A5C1NMU5
LinkDB
All DBs
Position
3976962..3981041
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AA seq
1359 aa
AA seq
DB search
MTTSIMLDPVTLPLDGNRLIEASAGTGKTFTIALLYVRLVLGPRPCTADGEPDTAAFPRP
LTPPEILVVTFTNAATLELRDRIRARLVEAAELFQQPVQQPTQQQAPQSTEPQDADNAGD
PLVRLRNQWPQEHWPACGRRLQLAAEWMDEAAISTIHSWCHRMLSEHAFDSGSLFSLSLE
TDQSELELDVARDYWRTFLYALPSEYLDQLTSHWETPEALHKALGRLLPHAESLDEAPVP
LETFEHVSAETEHCLAELKAPWPAWLDEMEAVLEDAASRKAFNGQKFNSRSRANWLAALR
QWVEDPGQKQPVLSDAAWKRLTPQGMADIWKEGPPPDLPALNALAELPAHLNDLPDAYPA
LVSHAVRWMAERRRQAQARRAEIGPDDLLIHLDRALCGSDSAQAGSQADSQSKRLAERIR
RQFPVAMVDEFQDTDPVQYRLFDRVYRLSGNDSPEEEIEPSAVLLIGDPKQAIYAFRGAD
IHTYLEARHATQGRHATLGRNFRSTEAMVRAVNHCFAQAEGYASGAFLFRHGTDNPLPFV
PVAANGRDETLMDNGTSLPALTLWYQDSEDDVSGGSYSKGSDSKGNYSKGHYRETMAEAC
ASYMTRLLIGAREGRTGFSSPTTDSSTTGSSTDKHAELRELTPGELAVLVNNGSEARAIR
QALSRRGIKSVYLSDKDGVFATPAAVEIETWLRAVSHPDDGMALRAALATPSLGLRLDEL
DALSSAREQDDLAWERRVLQFRDYRQRWRRQGVLPMLRRLLGDFNVAARLLADQERGERH
LTDLLHLGELLQQTSQELDGEHALIRYLAEGRQADPARDDRHRLRLESDADLVQVVTIHK
SKGLEYPLVFLPFIASFREQKKTDVPLWWHDGQHKRLALQASDEILEHADRERLAEDLRK
LYVALTRARHACWLGLAPLPQLERSAIGYLLGGGEALGPNNLKMVLSRLAAGEASIALTA
LPEADTTRLTSDTDNVLLEPARTPRRAAREHWWIASYSALQLGSLRSSTSTAQHSLMLDD
RIDTAFQAIESPGDTLQDSESRKHAEPTTALEANVRELAFEPDDKRGAMLPAATSLHRFP
RGPAAGTFLHGLLEWAGEQGFANALEEQRLADMVQRRTRLRGWEDWASPLCQWLTQLVST
PLPLPSAPPMALQDIHGYQVELEFWLASHNVDTRRLDDLVSANLLPGHPRPRLEADTLNG
MLKGFIDLVVEHHGRFYVVDWKSNYLGDDDSAYHADAMRDAVLSKRYDVQYALYLLALHR
LLAARLPDYDSQQHLGGAIYVFLRGITASSRGVHAECPAPAFITALDELFRGAPSVTKEP
SAKKEPSAKEEPSAKKEPSAKEKPSAINETPAAKGEHRQ
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccagcatcatgcttgatccggtcacgctgcctctcgacggcaaccggctgata
gaggccagcgccgggaccggcaagacctttaccatcgccttgctgtacgtgcgcctggtc
ctcggccccagaccctgcactgccgatggcgaaccggatactgctgcctttccacgtccg
ctgacaccgcctgaaattctggtggtgacctttaccaatgccgccacactggagctacgc
gaccgcattcgtgcacgcctggtggaagcggcagagctttttcaacaacccgttcaacaa
ccaactcaacaacaggcgccgcaatcaacagagccgcaggatgccgacaacgcaggcgat
cccctggtgcgcctgcgcaaccagtggccacaggaacactggcccgcctgtggtcggcgc
ttgcaactggccgcggaatggatggacgaagcggccatctcgacaatccattcctggtgc
caccgcatgctcagcgagcatgccttcgacagcggcagcctgttctcgctttccctggaa
accgatcagagcgaactggaactggacgtcgcccgtgactattggcgcaccttcctctat
gcattgcccagcgaatatctcgaccagctcacgagtcattgggaaacgccggaagccctg
cacaaggccctgggaagattgttgccccatgctgaaagcctggacgaagctccagttcct
ctggaaacctttgagcatgtcagtgccgaaaccgagcactgccttgccgaactcaaggca
ccctggcctgcctggctggatgagatggaggccgtacttgaagatgctgcttcgcgcaaa
gccttcaatggccagaagttcaactcccggagtcgcgccaactggctcgccgccctgcgc
cagtgggtggaagatccaggccagaaacagcctgtcctgagcgatgccgcctggaaacgt
ctcaccccgcaaggcatggccgatatctggaaagagggtccaccgccggacttgcccgcc
ctgaatgcactggccgaactgcctgcgcacttgaacgacctgcccgacgcctacccggca
ctggtcagtcacgcggtgcgctggatggcggagcgccgccgccaggcccaggcccgccgg
gcagaaattggtcccgatgacctgctgattcatctggatcgagcgctttgcggaagcgat
tccgctcaggctggttctcaagccgactctcagagcaaacggctggccgaacgtatccgg
cgtcagtttcccgtggccatggtcgacgagttccaggacaccgacccggtgcaatatcgc
ctgtttgatcgtgtctatcggctcagtggcaatgacagccccgaggaggaaatcgagccg
agcgccgtattgctgattggcgaccccaagcaggccatctacgctttccgtggcgccgat
atccatacctacctggaagcccggcatgccacccagggacgtcatgccacactgggcaga
aacttccgctccaccgaagccatggtccgcgccgtcaaccactgcttcgcgcaggccgaa
ggttatgccagtggcgcattcctgtttcggcatggcaccgacaaccccttgccctttgta
cccgtggcagccaacggtcgcgacgaaaccctgatggacaatggcacgtcattacctgcc
ctgacgctgtggtatcaggacagcgaagacgacgtatccgggggtagctattccaagggc
agcgactccaagggcaactattctaaaggccactaccgcgagaccatggccgaagcctgc
gccagctatatgaccaggctgctgatcggtgcccgcgaggggcgtaccggcttcagctct
cccacaaccgactcttccacaaccggttcttcaacagacaagcatgctgagttgcgggag
ttgacaccgggcgagctggcggtactggtcaacaatggcagcgaagcgcgcgccattcgc
caggccctgtcgcggcggggaataaagagtgtctatctgtcggacaaggacggcgtcttc
gcgacgccagccgctgtggaaatcgaaacctggttgcgcgctgtcagccatccggacgat
gggatggccttgcgcgccgcattggccacccccagcttggggctacgcctggatgagctg
gatgcattgtccagtgcgcgggagcaggatgacctggcctgggaacgccgggtgctgcag
ttccgagactatcgccagcgttggcggcgacagggggtcctgccgatgcttcgccgcctg
ctgggcgacttcaatgtcgcggcccgcctgctggccgaccaggagcgtggcgagcgccat
ctcaccgatctgctgcaccttggagagttgcttcagcaaaccagtcaggagctggatggc
gagcatgcgctgatccgctacctggccgagggccgacaggcagaccccgcgcgggatgat
cgccaccggctacgcctggaaagtgatgctgacctggtgcaggtcgtgaccatccacaaa
tccaaggggctggaataccccctggtgtttctacccttcatcgccagtttcagggaacag
aaaaagaccgatgtcccattgtggtggcacgacggccagcacaaacgactggccctgcaa
gccagcgacgagattctcgaacacgctgaccgagaacgcctggccgaggatctgcgcaag
ctgtatgtggccttgacccgggcacgtcacgcctgctggcttgggctggctccattgccg
caactcgaacgcagcgccatcggttacttgctcggcggaggcgaagccctggggccgaac
aacctgaagatggtgctgtcgcgcctggctgccggagaagcctccattgccctgaccgct
ttgccggaagccgacaccacccggctcacatccgacactgacaacgtactgctcgaacct
gcccgaaccccacgacgggcggccagggagcactggtggattgccagctattccgcactg
cagctcggcagcttgcgtagctctacctccaccgctcagcacagcttgatgctggatgac
cgcatcgatacggctttccaggctattgagtctcccggcgatacactgcaagacagcgaa
tcccggaagcacgccgaacccaccaccgccttggaagccaatgtccgcgagctggccttc
gagccggatgataaacgcggtgccatgctccccgcggccaccagcttgcaccgctttccc
cgcgggcccgccgcaggcactttcctgcatggtctgctcgagtgggcaggcgagcagggg
tttgctaatgccctggaggagcaacgcttggccgacatggtccagcgccgcacccgcctg
cgcgggtgggaagactgggcctcccccctgtgccagtggttgacccagcttgtctcgacc
ccgctacctcttccttcggcgccccctatggcactgcaagatatccatggctaccaggtc
gaactggagttctggcttgccagccacaacgtcgacacccggcgcctggatgatctggtc
agcgccaatctgctacccggccatcctcgtccacgcctggaggccgataccctgaacggc
atgctcaaggggttcattgatctggtggtggagcaccatggtcgcttctacgtggtggat
tggaaatcgaactacctgggtgatgacgactcggcctaccatgccgatgccatgcgcgat
gccgtcctgagcaagcgctacgatgtccaatacgccctttatctgctggccctgcatcgc
ctgctggctgcgcgactgcctgactacgatagtcagcagcaccttggcggtgccatctac
gtgttcctgcgtggtatcaccgccagcagccgcggcgttcatgccgagtgtccagcgccc
gccttcatcacggcattggatgagctgtttcgtggtgcaccttcagtgacgaaagagcct
tcagccaaaaaagagccttcagctaaagaagagccttcagctaaaaaagagccctcagct
aaagaaaagccttcagcgataaacgaaacgcccgcagccaaaggagaacatcgccaatga
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integrated database retrieval system
