Halogeometricum borinquense: Hbor_06560
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Entry
Hbor_06560 CDS
T01359
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hbo
Halogeometricum borinquense
Pathway
hbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hbor_06560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hbo02000
]
Hbor_06560
Transporters [BR:
hbo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Hbor_06560
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
ADQ66255
UniProt:
E4NN25
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All DBs
Position
610454..612085
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AA seq
543 aa
AA seq
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MTAEKRSPSRRRVLQAIGATGVAGLAGCTASSGGDGTDAVDEGDAAASNSSGKTFYFAQA
KSPLNFDPLKANDIPSLQVVERLFDSLYTYEQGTTLTPQLANGDPEVSKSGQRYVVSLKD
GITFHNGDPITAEDVKYSYLAPAREETENGSEFTMIDTISIVDDKTVQFDLKYPFGPFKH
SLAWSPVPKSVREADKKAFNTSNPVGSGPFEFDEWQQGSFVRMQRHDDYWGENGSNIETL
VFTPVKEPTTRITTLRNGENHAVQTVPPKLYSTVEGIEEASVTEQTGLGYFYLAFNCNEG
PTTDKKVREAIDYAISLDEAVNRYVEPAGTRMTSPLPQTLIDSWGFPGEKWDQIPHEKDQ
EMARQLLDEAGVSKDYDWTIIVPPDKKREQIGISVSNALKSLGFSNASVQRLDWGAFLDK
YATGKESDYNMYALGWLDEVDPDGYLYYLFHESEEASTNGCYYRNDEVMSQLDAARRSPD
REERKRLYTEAITTLLEDRAHLPVYNLKNSFGVRTEVEGFRPHTVSGINPRMTGPLGSVT
LNN
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgagaaacgcagtccgtccagacgacgagtactccaagctatcggtgcaacc
ggcgtcgcgggactcgccggatgcaccgctagcagcgggggcgacgggacggacgcggta
gatgagggggacgcggcggcgtccaattcgagcggaaagacgttctatttcgcccaagcg
aagtcaccgctcaatttcgatccgctgaaggcgaacgatattccatctctccaagttgtc
gaacgccttttcgattcgctctacacctacgagcaggggacgacgttgacaccgcaacta
gcaaacggcgatcccgaggtcagcaaatcggggcaacggtacgtcgtctcgctgaaagac
ggcatcacgttccacaacggcgacccgatcaccgccgaggacgtgaagtactcctacctc
gcgccggcccgcgaggagacggaaaacggctcggagttcacgatgatcgatacaatctcc
atcgtggacgacaagacggtgcagttcgatctcaaatacccgttcgggccgtttaaacac
tccctcgcgtggtcgcccgtgccgaagtccgttcgtgaggcggataaaaaggcattcaac
acctcgaaccccgtcggaagcggtcccttcgagttcgacgagtggcagcagggcagtttc
gtccgcatgcaacgacacgacgactactggggcgagaacggatcgaatatcgagacgctc
gtatttacgccggtcaaggagccgacgacccgcatcacgacgctccgaaacggcgagaat
cacgccgtgcagacggtcccgccgaagctgtactctaccgtcgagggaatcgaagaagca
agcgtcacagagcaaaccgggcttggatacttctatctcgcattcaactgtaacgagggg
ccgacgacggacaagaaagttcgtgaggcaatcgactacgctatctcgctagacgaggcg
gtaaatcggtacgtcgaacccgctggcacccgaatgacgagtccgctcccgcagactctc
atcgattcgtggggcttccccggggagaagtgggaccagattccgcacgagaaagatcag
gagatggctcgacaactgcttgacgaagcgggtgtctccaaagactacgactggacgatc
atcgtcccgccggacaaaaagcgcgagcagatcggtatcagcgtctcgaacgccctcaag
agtctcggcttctcgaacgcctcggttcaacgactcgactggggtgcgttcctcgacaaa
tacgccaccggcaaggagtcggactacaatatgtacgcgctcgggtggttggatgaagtg
gatcccgacggatatctctactatctgttccacgagtccgaggaagcttcgaccaacggc
tgttactaccggaacgacgaggtcatgtcccaactcgatgcagcacgtcggtcaccggac
cgcgaggagcgcaaacggttgtacaccgaggcgatcacgacgcttctcgaagaccgtgcg
catcttccggtatacaacctcaagaacagtttcggcgtccggaccgaagttgaggggttc
cgcccccacaccgtctcgggtatcaacccgcgcatgaccggtcccctcgggtcggtcacg
ctgaacaactga
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