Hevea brasiliensis (rubber tree): 110632976
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Entry
110632976 CDS
T05150
Name
(RefSeq) DNA mismatch repair protein PMS1-like isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110632976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110632976
DNA repair and recombination proteins [BR:
hbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
110632976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
110632976
NCBI-ProteinID:
XP_021637077
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MDASTTANSPIIRPINKGVVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKEYGE
EWFQVIDNGCGISPNNFKVLALKHHTSKLADFPDLQCLTTFGFRGEALSSLCALGDLSVE
TRSKNESVATHLTFDRSGLLTAERKTARQIGTTVTVKKLFSNLPVRSKEFNRNIRKEYGK
LISLLNAYALVAKGVRLVCSNATGKNAKSVVLKTQGSDSLKDNIITVFGMNTFSCLEPVN
ICISDDCMVDGFLSRPGQGSGRNLGDRQYYFVNGRPVDMPKVGKLVNELYRGANSRQYPI
AIMNFTVPTRACDVNVTPDKRKIFFSDEGSILLALREGLQRFYSPSNAFYSVNKFDEHMK
VTDSSQLYSPCEKSHKLSKQLSAISNDSKEIHMEDSTVGGSNVEIKSQLLDFGENDEDVG
ENNEMDSVKDFTLRVHGIKKAYSFTESKSRQLTTFHDSKNAPSPSRVFFKDIAENRDSNS
LSHSVQSTIKKFVTISKRKHEDVNTALSEIPVLRNQTLQSPLKKSNSETNAAAKGSPFNH
HPSKDSAEVSEIEPSKFAKAEIIFNKIRNSSSYGGKTNDGKIEEELLGEKKATTVADVLP
IASGKDLEKISEEPAGEEKALPLADAVLITSPSGGLEKMSEDLMVASSPFQSSDSTLDVP
KPSAEKICSTLQFSIQELRAKRHQRLSRLQFNSCASRGMKMNRHRSYAAATLELSQPDNE
ERKARALAAATKELERLFKKQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE
RLCQSTILNQQPLLRSLRMELSPEEEIIASMNMDVIRKNGFTLEEDPHASPGHRFKLKAV
PFSKNVTFGVEDVKDLISTLADSQGDCSIIGSYKMDTPDSVCPSRVRAMLASRACRSSVM
IGDPLGRNEMQKILEHLADLRSPWNCPHGRPTMRHLVDMMTIYKTSDENDASL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatctactactgcaaattctccgattattagacctataaacaaaggcgtggtg
cacagaatctgcgccggccaagtgattttggacctttcatcggccgtgaaggagctggtt
gaaaacagcttagacgccggcgccactagcattgaaatatctttgaaagaatacggcgag
gagtggttccaggtcatcgataatggatgtggcatttcccccaataatttcaaggttctt
gcactcaagcatcatacttctaaattggcagattttccggatcttcaatgtttgaccaca
tttggttttagaggggaggcattgagttcactttgtgcattaggagatctgagtgtggaa
acaagatccaaaaatgagtcagtagcaacacacttaacttttgatcgctcaggtttacta
actgctgaaaggaaaacagcacgtcaaattggcacaactgtcactgttaagaagttgttc
tccaatttacctgtgcgaagcaaagaatttaaccgcaacattcgcaaggaatatggaaag
cttatttctttattgaatgcctatgcacttgttgcaaaaggcgttcggttagtctgctcc
aatgcaaccggtaaaaatgcaaagtctgttgtacttaaaacacaaggaagcgattccctt
aaagataacatcataacagtatttggcatgaacaccttcagctgcttagagcctgttaat
atatgcatatcagacgattgcatggttgatggattcctttctaggcctggacaaggcagt
ggccgcaatttgggagataggcaatactattttgtaaatggtcgaccagtggatatgcct
aaagtcggcaagcttgtgaatgagttatatagaggtgcaaactctcgccaatatcccatt
gcaattatgaatttcacagttccaaccagagcatgtgatgtgaatgtaactccggataaa
agaaaaatattcttttctgatgagggttccatattgctcgctttaagggagggtttacag
cggttttattccccaagtaatgccttttattctgtcaataaatttgatgagcatatgaag
gttaccgatagctctcagttatattctccttgtgagaaatctcataagttgtcaaaacag
ttatctgcaattagcaatgactctaaagaaattcacatggaggactccacagtgggcggc
agtaatgttgaaatcaaatctcagctcttggattttggagaaaatgatgaagatgttgga
gaaaataatgaaatggactcagtaaaggacttcactcttagagtacatggcattaaaaag
gcctatagttttacagaaagtaaaagtaggcaactaacaactttccatgatagtaaaaat
gctccatctccttcaagagtgttttttaaagatattgctgaaaatagagattctaatagt
ttgtcacattctgttcagtcaacgattaaaaagtttgtaactataagtaagagaaagcat
gaagatgttaatacagcactatctgaaattccagtcttgagaaatcaaactcttcaaagt
ccattgaagaaaagtaattctgagacaaatgctgcagctaaaggttctccatttaatcat
caccccagtaaagattctgctgaggtgagtgagattgaaccatccaagtttgctaaagca
gaaattatcttcaacaaaatcaggaattcgtcttcttatggagggaagaccaacgatgga
aaaattgaggaggaacttctgggtgaaaagaaggcaacaactgtggctgatgtcctgcca
attgcttctggcaaggatcttgagaaaatatctgaggaacctgcaggtgaagaaaaggca
ttacctcttgctgatgctgtgttaatcacttctcccagtggcggccttgaaaaaatgtct
gaggatcttatggttgcaagttctccatttcagtcttctgattccactttagatgttcca
aagccttctgctgaaaagatatgctccaccttgcaatttagtattcaggaactaagggca
aaaaggcaccagaggctgtcaagattgcaattcaacagttgtgcatccagaggcatgaag
atgaacagacataggagttatgctgctgcaacattagagctttctcaaccagataatgag
gagcgaaaagcaagggctttagctgcagctactaaggaattagaaagacttttcaaaaaa
caagactttggaaggatgaaggtgattggccaatttaatcttggattcattatcgggaag
ttagatcaagatttgtttattgtggatcagcatgctgctgatgagaaatacaattttgag
cgactgtgtcaatcaacaatcttgaaccaacagcctttgctgcggtcattgaggatggag
ttatctccagaggaagaaataattgcttcaatgaacatggatgtaatcaggaagaatgga
tttactttggaagaggatccacatgcatctcctgggcaccgatttaaactaaaagctgtt
ccctttagtaagaatgtaacttttggagttgaagatgtgaaggacttaatctctactctt
gctgatagtcaaggggactgctcaataattggtagttacaaaatggatacccctgattct
gtctgcccatcaagagtccgtgcaatgctggcatcacgcgcatgcagatcatctgttatg
attggagatccactaggaaggaatgaaatgcagaagatacttgaacatttggcagacctg
agatcaccttggaattgtccacacggaaggccaactatgcgccatttggtagacatgatg
accatctacaaaacatcagatgaaaatgatgcaagcttgtga
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