Hevea brasiliensis (rubber tree): 110663909
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Entry
110663909 CDS
T05150
Name
(RefSeq) probable RNA helicase SDE3 isoform X1
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110663909
03036 Chromosome and associated proteins [BR:
hbr03036
]
110663909
Enzymes [BR:
hbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
110663909
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110663909
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
110663909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
110663909
NCBI-ProteinID:
XP_021679079
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MLVFAVFDLVLTKKKFQEESHRKKAYMSLFLEILRAIFGSGSRNSANSGSTNFNSVERIY
DVSGSSNRNSSSPETSSCWLPQSSSKEATSSSSPTPSRPKPPASSSYQRQSLTWDITSSK
PSLLSPAPPISSKSSPRAPKLPLSSNQAEPLMPEIPSSKPSPVSLTAPTFSLKPSAQAPL
TSFKPSPSPSEPLPSFKPTLAPASSNVTSQQTKANYVLVQKDASPIYMIPMDIQDLIKKD
KVPGVLKRPLSMSTYKDYFAALLYAEDFYVEKWSKFKLENITLKLQQASIFKLSSFSESH
EKDNKTLVTFEIDSCHERRPFLLSRDFVFARPSGNETEPFQGVIYRVVRSTTVLVEFSED
FYAQHHSFRRYDVSFSFNRVCLKRAHQAVEAASDPLFKSYIFPDCDLRRRHPASSTAYFN
YKLDADQTSAVRQILAFQGPPPYLIEGPLCVTKAKRNECRQLSKTGLVIQEAVLEIYRSS
QQHRVLICAPINNTCDLLTSSLKKHIPESEMFRANAAFREIDGVPTDILPSCIYAGECFS
CPRLQELRKYRVILSTYVSSFRLCNEGIAAGHFSHIFLVDASSATEPEAMVALANLANEK
TAVIVTGAPGNHPGWVRSDIARKSGLMDSYFERLRKTNPYNRLDSMFITKLDSVERKSDD
TDSFQSFSFY
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgttcgcagtttttgatttagtactaacaaaaaaaaaatttcaggaagaaagt
catagaaagaaggcctacatgtctctgtttcttgaaatcttgcgggcaatatttggttca
gggtcaagaaattcagcaaacagtggatccacaaactttaactcagtggaaagaatatat
gatgtgtctggtagttcaaatagaaattccagtagtccagaaacatcttcctgttggcta
ccacaatcttcatccaaagaagccacatcttcttcaagtccaactccatcaagacctaaa
cccccagcatcttcttcttaccaacgtcaatcactaacatgggatataacttcttctaaa
ccatctctgctctctcctgcacccccaatttcatcaaaatcatccccccgggcacctaaa
ctcccactatcttcgaaccaagctgaaccattaatgccagaaataccctcttctaaacca
tcgccagtttctcttacagctccaactttttcgttaaaaccatccgctcaagcaccttta
acttcttttaaaccatctccatcaccctctgagccccttccatcttttaagccaacactg
gctccggcttcctcaaatgtcactagtcaacagacaaaagccaactacgtattagttcaa
aaggatgcatcacctatttatatgattcccatggatatacaagatttgatcaagaaagac
aaggtgcctggagttcttaaaaggccattgtctatgtcaacatataaggactattttgct
gctcttctttatgctgaagacttctatgttgagaaatggagtaagttcaaattggagaat
atcacgttaaagttgcaacaagcatcaatctttaaactgtcatccttctcagagagtcat
gagaaggataataaaaccttggtgacatttgagattgactcatgtcatgagaggcggcca
tttctcttatcaagggactttgtatttgcaagaccttcaggaaatgaaactgagccattt
cagggtgttatctatcgagtggtgaggagcacaactgtgctagttgaattcagtgaagat
ttttatgctcagcatcattcgtttcgcagatatgatgttagcttctcatttaacagagtt
tgtttaaaaagggctcatcaagcagttgaagccgcttcagatcctttatttaaaagttac
attttccctgattgtgacctcagaaggagacaccctgcatcatcaactgcctattttaat
tataaacttgatgcagatcaaacatccgcggttcgtcagatcctagcctttcaggggcca
ccaccttatctcattgagggcccactctgtgtaactaaagcaaaaaggaatgaatgtaga
caactatcaaaaactgggttggttatccaagaagcagtgcttgaaatttatagaagctct
caacagcaccgagttcttatatgtgcacctattaacaacacatgtgatttgctgacaagt
agcttgaagaagcacattcctgaatcggaaatgtttcgagctaatgctgcatttcgagag
atagatggggtgcctactgatatccttccttcatgtatttatgcaggtgaatgtttttct
tgtcctcgtcttcaggaactccggaaatatagagtaatattgtcaacttatgtgagcagc
ttccggctatgtaatgaaggcattgctgctggacattttagtcacattttcttggtggat
gcctcatcagctactgagcctgaggcaatggtggcactagctaatttggctaatgagaaa
actgctgtaatagtcactggtgcaccgggaaaccatccaggttgggtccgctctgatatt
gctaggaaaagtggactgatggattcatactttgaaagacttcgcaagacaaatccatac
aatagactagattcaatgtttatcacaaagttggacagcgtcgagcgcaaatcagatgat
acagatagctttcagtcattctccttctattaa
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