Hemicordylus capensis (graceful crag lizard): 128336143
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Entry
128336143 CDS
T08891
Symbol
VTN
Name
(RefSeq) vitronectin isoform X1
KO
K06251
vitronectin
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04510
Focal adhesion
hcg04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128336143 (VTN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128336143 (VTN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hcg04147
]
128336143 (VTN)
00536 Glycosaminoglycan binding proteins [BR:
hcg00536
]
128336143 (VTN)
Exosome [BR:
hcg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128336143 (VTN)
Glycosaminoglycan binding proteins [BR:
hcg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128336143 (VTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
Motif
Other DBs
NCBI-GeneID:
128336143
NCBI-ProteinID:
XP_053131306
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All DBs
Position
12:complement(13832764..13842937)
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AA seq
661 aa
AA seq
DB search
MSPLPRKDRLGQEAAPLPGQQHPPLLSRMLPLLGGGVAQPGSRHQAVLDAGPSSLQRLPM
AAGRSSPAGRCTDTDTDTDTPRPPFSYRAGAWRAWRSLGGHFCLAASAAALEPSRAVRGA
QSVTQTNPLAGCCGDGEPGQQQGGRCGAAWPVWPQKTQAGVQALREGGVCREGRLNKHAP
RLLQREAAGAPPPPPPPPPPVRQGRSPARLLAMRLLLLLVTLPLAFAAEESCEGRCDLGF
DALKKCQCDDLCIYYQSCCTDYAATCKSKVTRGDVFLQPEDEYPDYYDPDLPNVTTTVRP
ATTSPAPEATTGYEYVWAEEPARGTEEPARGTEEPARGTEATDSTEETLCSGKPFDAFAS
LKNGSIYAFRGRHFYELDEKSARPGYPKLIEEVWGIPGPIDAAFTRINCQGKTYLFQGSQ
YWRFDDGLLDPEYPRNISDGFKGIPHGVDAAFALPAQNYFASERVYFFQGKKYWSYDFTK
QPSRQQCEETSPSVVFDHYTLLQDDSWDDVFQLLFGGSRRGGASRPRPLLRDWKGLPAQL
PRLDAAMVGRIYVSRRAPQRRSGKRPSRQHRRRYRNRQRWGRWDPPSWDWLDEASSESSD
LDWLWGSDPPCQPLQSVYFFAEDKYYRLNLQTRRVDTVKPRYPRSIAKYWLGCPEEEEDL
A
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccctcccaaggaaggaccgcctcggccaggaggctgctccgttgccagggcaa
cagcatcctcctctcctctcccggatgctcccgctcttgggaggaggtgtagcccagccg
ggctccaggcatcaggcagttctcgatgctgggcccagctcgctgcagcggctgcccatg
gctgcaggcaggagcagccctgccgggagatgcacagacacagacacagacacagacacc
ccacgcccccctttttcctatcgggcaggtgcctggcgggcttggcgttcgctgggaggc
cacttctgcctggctgcgtctgcagcagctttggagccaagccgggctgtccgaggagcg
cagtccgtcacccagactaatcctctggccggctgctgcggagacggagagccgggccag
cagcaaggagggcggtgtggcgcggcgtggcccgtctggccccagaaaacgcaggccgga
gtccaggccctcagggaggggggcgtgtgcagggagggccggctgaacaaacacgctccg
cggctgctgcagcgggaggctgctggagccccaccaccaccaccaccacctcctcctcca
gtcagacaaggacggtcgcctgcccggctgctcgccatgaggctgctgttgctgctggtg
accctgccgctggccttcgctgccgaggagtcctgcgagggccgctgcgacctggggttc
gacgccctgaagaaatgccagtgtgacgacctctgcatctactaccagagctgttgtacc
gactacgccgccacgtgcaagagcaaagtcacccgcggagacgtctttctgcagcccgag
gatgaatacccggattactacgaccccgacctccccaacgtcaccaccaccgtccggcct
gcaaccaccagcccggccccagaggccaccactggctacgagtacgtgtgggcagaagag
ccagcaagggggacagaagagccagcaagggggacagaagagccagcaagggggaccgag
gccacggactccacggaagagaccttgtgcagcgggaagcctttcgatgcctttgccagt
ctgaagaacggctccatctacgccttccgtgggcgacatttctacgaactcgacgagaag
agcgccaggcctggttatcccaaactgatcgaggaagtgtggggcatcccgggccccatt
gacgccgccttcacccgcatcaactgccaggggaagacctacctcttccagggaagccag
tactggcgcttcgacgacggcctcctggacccggagtacccccggaacatctcggacggc
ttcaaggggatcccccacggcgtggacgcggccttcgcgctgcccgcccagaactacttc
gccagcgagagggtctacttcttccaagggaagaaatactggtcctacgacttcacgaag
cagcccagccgccagcagtgcgaagagacgtccccctcggtggtctttgaccactacacg
ctgctccaggacgactcctgggacgacgtcttccagctgctctttggggggtcgcgaagg
ggtggggccagcaggccacgccccctcctcagagactggaaggggctgcccgcccagctg
ccgcgcctggatgcggccatggtggggcggatctacgtgtcccgcagggccccccagcgc
cgctccgggaagaggccctcccgccagcaccggagacggtaccgcaaccggcagcgctgg
ggccgctgggaccccccgtcctgggactggctggacgaagccagctcggagtcctccgac
ctggactggctgtggggcagcgaccccccctgccagcccctgcagagcgtctacttcttt
gcagaagacaagtactaccgtctcaacctgcagacgaggcgtgtggatacggtgaagccc
aggtacccccgctccatcgccaagtactggctgggctgcccggaggaggaggaggacctg
gcctga
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