Hemicordylus capensis (graceful crag lizard): 128336152
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Entry
128336152 CDS
T08891
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily V member 2-like
KO
K04971
transient receptor potential cation channel subfamily V member 2
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128336152
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hcg04040
]
128336152
Ion channels [BR:
hcg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128336152
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ank_4
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
128336152
NCBI-ProteinID:
XP_053131317
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Position
12:21802082..21825474
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AA seq
730 aa
AA seq
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MEATPEKALSLHPTNWMFISDNAESKAQDEDLRTLADAYRSVSCQNSSLECLAKSISAHH
LSTMQTHEPLLETSDSVKEAAASENQTGRTEDKPWPLDTPFQKEREPSPRIKINLNYRKG
LVDPNDPDCFDRDQLFSTVTRGNPEDLEGLSDYLRRTRKYLTNSEYTDGITGKTCLMKAL
LNLKGGRNPTIPLLLQIDKETENPRPLINVACRDSYYRGHTALHIVIEKRNLDLIQLLVE
NGADVHARASGKFFQQRKKGVCFYFGELPLSLAVCTNQADVIQYLLHNPYQQARLTEQDS
QGNMVLHALVMVADDTEKNTELVIRMYDEVLIEGSKINPTWRLEEMVNQKGLTPLKLAVK
TGKVEIFKHILHXEIKDPAFRHLSRKFTEWTYGPLQISLYDLSSIDSYEKNSVLEILAYN
SDTPNRYKMVVMEPLNKLLQWKWDSFASQRFHFSFFFYLLFMFVFSAVAYHRPVDEKLPY
AVTVSAGSIFMLLGQIIVCLGGLYLLVGQGLYLWRRRKSLKSLLADSCIEIFLLVQSFAL
LTSVPLYLLGMEEYVPFMVFSLLLGWVNMLYYTRGFEQTGLYSVMIQKAILRDLLCFLLV
YVIFLMGFALALFTLAGKAPAFNTTVAPKTEEHISPVVYSGLFQTCLELFRFTIGMGDLE
FQEHVKFKYFVMFLLLLFVILTYILLLNMLIALMSETVTNVSGYSQSVWKLQVSPTAVSP
TALPSLLGFF
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggaggccactcctgagaaggctctgtccttgcatcccaccaactggatgtttatcagt
gacaacgcagagagcaaggctcaagatgaagacctgaggaccttggcagatgcatatcgg
tcagtttcgtgccagaactcaagcctggaatgtttagccaagagtatctcagcccatcat
ctttcaacaatgcagacccatgagccattattagaaacgtctgatagtgttaaggaagca
gcagcctctgagaatcagacgggccgaacggaggacaaaccatggccactggacacgccc
ttccagaaggagagagagccctccccaaggatcaagatcaaccttaattatcgcaaggga
cttgttgacccaaatgacccggattgctttgatagagaccagctttttagcaccgttacc
agggggaacccggaggatctggaaggcctgagtgactacctgagacgaacccgtaaatat
ctcacaaactctgaatatacagatggcatcacaggcaagacctgcttaatgaaggccctg
ctgaatttaaaaggcgggaggaaccccaccatcccactactgttgcaaatagacaaggag
actgagaaccccagaccgctgatcaacgttgcttgccgggatagctactacagaggtcat
acagctctccacattgtcattgagaagaggaatctagatctaatccagctcctggtagag
aatggtgctgatgtccatgccagggcttctggcaagtttttccaacagaggaaaaaagga
gtctgcttctattttggcgagcttcccctctccctggctgtgtgcaccaaccaggcggac
gtgatccagtacctcctgcataatccttaccagcaggccaggctgacggaacaggattcc
cagggcaatatggtcctccatgccctggtgatggtggccgacgatacggagaagaacacg
gagctggtgatcaggatgtacgacgaggtcctgatcgaaggctccaagatcaaccccacg
tggaggctggaggagatggtcaaccagaaagggctgacccctttgaaactggcggtcaag
actggcaaagtagagattttcaagcacattcttcactgagagatcaaggacccggctttc
cggcatctctcgcgcaagttcaccgaatggacctacgggcccctccagatctctctctac
gacctgtcctccatagacagctacgagaagaattcagtgctggaaatcctggcctataac
agcgacaccccgaaccggtacaaaatggtggtcatggagcctctgaacaagctgctccaa
tggaagtgggattcctttgcgtcacagagattccacttcagtttcttcttctacctgctc
ttcatgttcgttttctcggctgtcgcttaccaccggcccgtggatgagaaacttccttat
gcagtgacggtttctgccggaagtatcttcatgctcctgggccagatcattgtctgtctt
ggaggcctttatctcttggttggtcagggtctctacctgtggaggcgacgcaagtccttg
aagagtctgcttgcagatagctgcattgaaatttttctgttggttcagtcgtttgcactg
ctgacttctgtgccactgtaccttttgggcatggaagaatacgtacctttcatggttttc
tctttgcttttgggctgggtgaacatgctatactacacccgtggcttcgagcagaccggg
ctctatagtgtcatgatacagaaggctattctgagggaccttctgtgtttcctcttggtc
tacgtgatcttcctcatgggctttgcattagccctcttcactctcgctggaaaagctcca
gccttcaatacgacagttgccccgaagacggaggagcacatatccccggttgtctactcg
gggctgttccaaacctgcctggagctcttcagattcaccattgggatgggtgacctggag
ttccaagagcacgtgaagttcaagtacttcgtcatgttcttgctcctgctctttgtgatc
ctgacctacatcctcctgctgaacatgctgattgccctgatgagcgagacggtcaccaat
gtctccggctacagccagagcgtctggaagctccaggtcagtcccacagcggtcagtccc
acagcattgccttctctgctgggcttcttttga
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