Hemicordylus capensis (graceful crag lizard): 128344123
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Entry
128344123 CDS
T08891
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128344123 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcg03036
]
128344123 (MBD4)
03400 DNA repair and recombination proteins [BR:
hcg03400
]
128344123 (MBD4)
Chromosome and associated proteins [BR:
hcg03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
128344123 (MBD4)
DNA repair and recombination proteins [BR:
hcg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
128344123 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
128344123
NCBI-ProteinID:
XP_053149627
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All DBs
Position
2:complement(294781158..294799629)
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AA seq
565 aa
AA seq
DB search
MSIQEAKEQRLGSDISNMQLISDENKEKGQLTTAAESCFDLKKEGIATIAENPIQHKEDG
SIVPLGASLSHKAVPKGWEKIIKQRRSGKTVGKFDIYFMSPQGMKLRSKRALLDYFKKNG
ETVLKLVDFDFTAPPAQKTIQSRTQGSSTGTEWSEVQNDNSPSHILDLGLQHCEGEHLQN
NTLELQINDVTLDKNSICLQDGPTIDAKSKDCCFKPQENGTVGRKIQIRKARNKSDTRNL
DGEQKKRQTKRPPKKQGTVNAKKTEQKEEICAFNSDGIGEQKVCWRASRKRKIALKDELL
VSKPKLEVPVKPVAAISEYKSRAEVLKCGEGSSSVATVEPVDLHIPELEELKNEVPSESQ
DSKFAPKVDINASQMCEEKSLTSVKEDHGRRTQVERRKTSPYFSIKLIKEAPSPPRRKAF
RKWTPPRSPFNLIQETLFHDPWKLLIATIFLNRTSGKMAIPVLWEFLKKYPSPKVARTAN
WKEMSELLKPLGLYELRAKTIIKFSDEYLVKQWKYPIELHGIGKYGNDSYRIFCVNEWKE
VQPQDHKLNIYHAWLWENHEKLNLN
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattcaggaagcaaaagagcagcgtctgggcagtgatataagcaatatgcagttg
atcagtgatgagaacaaagagaagggtcagctgacaacagcagcagaaagctgttttgat
ctcaagaaagaaggtattgcgactattgcagaaaatccaattcagcataaagaggatgga
tcaattgtgcctttaggtgcttccctatctcacaaagctgttccaaaaggatgggagaag
ataataaagcaaaggcggtctggcaaaactgtaggaaaatttgacatttattttatgagt
cctcaaggaatgaagctcagatctaaacgtgctcttttggattactttaaaaagaatgga
gagactgttcttaaattagtggattttgattttactgctcctcctgctcagaagactata
caatcaagaacacaaggatctagcacaggaactgagtggtcagaagtacagaatgacaac
tctcctagccatattctagatctcggattgcaacattgtgaaggggaacatctgcaaaat
aatactttggaattgcaaattaatgatgtaacgttggataaaaattccatctgtttgcag
gatggtcccactattgatgctaaatcaaaggactgttgttttaaacctcaagaaaatggt
acagttggaagaaagattcagattaggaaagctagaaacaagtcagatactaggaatttg
gatggtgagcaaaagaaaagacagacaaaacggccacctaaaaaacaaggaactgtgaat
gctaaaaaaactgaacaaaaagaagaaatatgtgcttttaacagtgatggtattggagag
cagaaagtgtgctggagagcctcaagaaaaaggaaaatagccttgaaagatgagcttctg
gtttctaaaccaaagttggaggtgcctgttaaaccagttgcagctatctcagaatacaag
tcaagagcagaagttttaaaatgtggtgagggatctagtagtgtagccactgtagaacca
gttgatctacatattccagaactggaagagctgaaaaatgaggtgccttcagagagccaa
gattcaaagtttgctcccaaggtggacattaatgcttcacaaatgtgtgaagagaaaagt
ttaacatcagtaaaagaggaccatggtcgaagaacccaagtggaacgaagaaaaaccagc
ccatatttttcaattaaattaatcaaagaagctccaagcccacctagaaggaaggccttt
cgaaaatggactccacctcgttctccttttaacttgatccaagaaacactttttcatgat
ccatggaagcttctgattgcaaccatatttctgaataggacctcaggcaagatggccatc
cctgtactgtgggaattcttgaagaaatacccttcacctaaagtagcaagaactgccaac
tggaaggaaatgtcagaactgcttaaacctcttggcctgtatgaactcagagcaaagacc
atcatcaaattctcagatgagtatttggtcaaacagtggaagtatcctattgagctgcat
gggatcggaaaatatggaaacgattcttacaggatcttctgtgtcaatgagtggaaagag
gtacagccacaagaccataagctgaatatttatcatgcctggctttgggaaaaccatgaa
aaactgaatcttaattaa
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