Hahella chejuensis: HCH_03647
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Entry
HCH_03647 CDS
T00307
Name
(GenBank) predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain
Organism
hch
Hahella chejuensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
Response_reg
GGDEF
PAS_9
PAS
PAS_8
PAS_4
Motif
Other DBs
NCBI-ProteinID:
ABC30387
UniProt:
Q2SG37
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Position
complement(3789177..3791702)
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AA seq
841 aa
AA seq
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MTTILQANGFEDCATIEDLSEFTVLIVDDSPLNLDVAVACLESRGYRTLSAENGVQALQI
AMEHQPSLILLDVMMPEMNGFETCRKLKKLSGCDDIPVIFMTALSDVKSKKAGFDAGGVD
YVTKPFQVEELAARVHTHIALKVAYRHLKDSELRYRKLVETTPDAILVEGEEGIVFLNSA
AVKMLKADNPDKLLGGALLDFVLDDQKEYAAMQLKQACSVDRSAGPPEVMLLQQLTGGRV
EVEVNCIPISYHRSPCHMFVLRDITERRRQEAAIEFQATHDALTGLPNRSLFLDRVTQSI
NHARRNESRLALIFIDLDKFKLINDTLGHNAGDDLLRIMSKRLQECTRNCDTLARFGGDE
FVLLVDNLESEADLTHLAARLISSVSAPVLLLGQSHSITCSLGISSFPEDGDNVEVLMRH
ADIAMYRAKESGRNSYQFFTHQMQDRLNERLKLESSLKQALENDEFVLHYQPQVDLSTGK
IIGLEALIRWQSPTLGLVPPGDFIPAAEEGRLISAIGEWVIFAVCKRLQSWRRQGLKIVP
VAINISALQFMEQKTEELVKQALNEYMVEPKYLELELTESLSMLDPVTSISLMQRLKDIG
VSLSIDDFGTGYSNLSYLKRFPVNKLKIDKSFVSGLTNNPDDYSIVKAIIRMSQSLGLKT
IAEGAETAGQIALLAAENCDAIQGFYFSRPLPEAEICAMLKERPRLDISEFGRNKDRGAV
LVVDDDVNILRSIKRILRDEAYEVLVASNTEDAYEVLARREVAVIVSDLQMPGESGVQFF
SKIKTMHPRSLRILLTGHGSSESLEGAINQGEIYRYISKPWDNAHLLETLGAAFKQYEKG
V
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgacgactatcttgcaagctaatggattcgaggattgcgccacgattgaggatctctct
gagtttacagtcttaattgtggacgactcgcctctcaatctggatgtggcggtggcttgt
ctggaaagccggggctaccgcactctgtccgccgaaaatggcgtgcaggccctgcaaatc
gctatggaacaccagccctccctcattcttcttgacgtcatgatgccggaaatgaatggg
ttcgaaacctgccgcaagctgaagaaactgagtgggtgcgacgatattccagtaattttc
atgaccgcgctcagcgatgttaaaagcaagaaggcgggcttcgacgccggcggtgtggat
tacgtcaccaaacccttccaggtggaggagctggcggcgcgggtgcatactcatatcgca
ctgaaagtcgcctaccggcatctgaaggacagtgagctgcgttaccgcaagttggtggag
accacgccggacgccatcctcgtggagggggaagaaggcatcgtgtttctgaattccgcg
gcggtgaaaatgctgaaggcggataacccggataagctgctgggcggcgcgttactggat
ttcgtcttggacgatcagaaagaatacgcggcgatgcaattaaaacaggcttgctcggtg
gacaggagcgccggcccgccggaagtcatgctgctgcagcagctgaccggggggcgtgtg
gaagtggaggtcaactgcattcccatatcctatcatcgttcgccttgccacatgtttgtg
ttgcgtgacatcactgaacgtcgacgtcaggaggcggcgattgagtttcaggctactcat
gacgcgttgaccggcctgccaaaccgtagcctgtttctggatagggtgacgcaatcgatt
aatcacgcgcgacgtaatgagtccagattggcgctgattttcatcgacctggataagttc
aagctgatcaatgacacgctgggacataacgccggggatgatctgctaaggatcatgtcg
aaacgtttgcaggaatgcacccgcaactgcgacaccctggccaggttcggcggcgacgag
ttcgttttactggtggacaatctggaaagtgaagcggacctgacgcatctggcggcgcgc
ctgatcagctccgtcagcgcgccggtgttattgctgggacagagccattccattacctgc
agtctgggcatcagcagctttccggaagacggcgacaacgtggaagtgctgatgcgtcat
gcggatatcgccatgtatcgggccaaggagtccgggcgtaattcctatcagtttttcact
caccagatgcaggatcgcctcaacgagcgtctgaagctggaaagcagcttgaaacaggcg
ctggagaacgacgaatttgtattgcattaccaacctcaagtggatctgagcaccggcaag
attattgggcttgaagccttgatacgctggcagtcgccaaccctgggactggtgccgccg
ggagattttattcccgctgcggaagaggggcgtttgatctccgccattggcgagtgggtc
atcttcgccgtctgtaaacgcctgcaaagctggcggcggcaggggttgaagatcgtgccg
gtggctatcaacatttccgccttgcagttcatggagcagaaaacggaagaactggtgaag
caggctttgaatgaatacatggtggagccgaagtatctggagctggagctgacggagtct
ctctccatgctggacccggtcacatccatctctcttatgcagcggctcaaggatatcggc
gtttctttgtccattgacgacttcggcaccggatattccaacctcagctatctcaagcgt
tttccggttaataaactcaaaatagataaatcctttgtgtcaggcctgactaataacccg
gacgattactccatcgtcaaagccattatccgcatgtcccagagtctggggttgaagacc
attgcggaaggcgcggagacggcgggtcagatagcgctgttggcggcggaaaactgcgat
gcgatacagggcttctacttcagccgtccgctgccggaggcggagatttgcgccatgctc
aaggagcgcccgcgcctggacatcagcgaattcggtcgaaacaaggacagaggcgcggtg
ctggtagtggacgatgacgttaacattctgcgcagcattaagcgcatccttcgagatgag
gcatacgaagtactggtggccagtaatacggaagacgcctatgaagtgctggcgcggcgc
gaagtggcggtgatcgtgtcagatttgcagatgccaggagaaagcggcgtacagtttttc
tcgaaaatcaaaaccatgcatccgcgctcgctgcggatactgctcaccggccatggctcc
tctgaaagcctggaaggcgcgatcaaccagggcgaaatctatcgctatatctccaaaccc
tgggacaatgcgcacttgctggaaacgctgggggcggcgttcaagcaatacgagaagggc
gtttag
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