Helicobacter pylori HUP-B14: HPB14_02970
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Entry
HPB14_02970 CDS
T02035
Symbol
ddl
Name
(GenBank) D-alanyl-alanine synthetase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
hcn
Helicobacter pylori HUP-B14
Pathway
hcn00470
D-Amino acid metabolism
hcn00550
Peptidoglycan biosynthesis
hcn01100
Metabolic pathways
hcn01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hcn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPB14_02970 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPB14_02970 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HPB14_02970 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hcn01011
]
HPB14_02970 (ddl)
Enzymes [BR:
hcn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HPB14_02970 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
hcn01011
]
Precursor biosynthesis
Amino acid ligase
HPB14_02970 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
GARS_A
ATPgrasp_TupA
RimK
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
AFI07301
LinkDB
All DBs
Position
complement(602708..603751)
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AA seq
347 aa
AA seq
DB search
MEFCVLFGGASFEHEISIVSAIALKGVLKDRIKYFIFLDENHHFYLIEESNMHSKYFAQI
KEKKLSPLILTHNGLLKNSFLGTKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPR
IEASVLSYNKYLTKLYAKDLGVKTLDYVLLNEKNRANALDLIGFNFPFIVKPSNAGSSLG
VSVVKEEKELIYALDSAFEYSKEVLIEPFIQGVKEYNLAGCKIKKDFCFSYVEEPNKQEF
LDFKQKYLDFSRNKAPKANLSNALEEQLKENFKKLYNDLFDGAIIRCDFFVIENEVYLNE
INPIPGSLANYLFDDFKITLENLVQSLPKPPKIQIKNSYLLQIQKNK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
gtggagttttgcgttttatttggtggggcgagttttgagcatgaaatcagcattgtgagc
gcgatcgcgcttaaaggagtgttaaaggataggattaaatattttatttttttagacgaa
aaccatcatttttatttgattgaagaatccaacatgcattcaaaatacttcgctcaaatc
aaagaaaaaaaattatcccccctaatccttacgcacaatggcttgcttaagaactcgttt
ttaggcactaagataatagaattgcctttagtgatcaatcttgtgcatgggggcgatggc
gaagacgggaaattagcgagcttgttagaattttatcgtatcgcttttataggccctagg
attgaagcgagcgtgctgagttacaacaaatatttaaccaaactttacgccaaagattta
ggggtaaagactttagattatgtgcttttgaatgaaaaaaaccgcgctaacgccctggat
ttgattgggtttaatttccctttcattgtcaagcccagtaacgccggaagctccttaggg
gtgagcgttgtgaaagaagaaaaagaattgatttacgctttagacagcgcgtttgaatat
tctaaagaggtcttaatagagcctttcattcagggcgtgaaagaatacaatttggccggc
tgtaagatcaaaaaggatttttgtttttcttatgtggaagagcctaacaaacaggaattt
ttagatttcaaacaaaaatatttggatttttcacgcaataaagcccctaaagcgaacctt
tctaacgctttagaagaacaattaaaagaaaattttaaaaaactctataacgatttgttt
gatggcgcgatcatccgttgcgatttttttgtcatagaaaatgaagtgtatcttaatgag
atcaaccccattcctggcagtttggccaattatttgtttgatgattttaaaataacgcta
gaaaatttagtgcaatcattacccaaaccccctaaaatccaaatcaaaaactcttatttg
ttgcaaatccaaaagaataaataa
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