Halomonas chromatireducens: LOKO_01004
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Entry
LOKO_01004 CDS
T04292
Symbol
lptB_3
Name
(GenBank) Lipopolysaccharide export system ATP-binding protein LptB
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
hco
Halomonas chromatireducens
Pathway
hco02010
ABC transporters
hco02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LOKO_01004 (lptB_3)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOKO_01004 (lptB_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hco02000
]
LOKO_01004 (lptB_3)
Transporters [BR:
hco02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
LOKO_01004 (lptB_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
BCA_ABC_TP_C
SMC_N
AAA_16
MMR_HSR1
AAA_22
Zeta_toxin
AAA
ATP-synt_ab
AAA_29
AAA_23
SRP54
Motif
Other DBs
NCBI-ProteinID:
AMD00081
UniProt:
A0A120JVS5
LinkDB
All DBs
Position
complement(1062135..1062899)
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AA seq
254 aa
AA seq
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MTEAQLSMSPEPALEVAGLAKSFGSLMVASDVHLRVAPGERRGLIGVNGAGKTTLFNMIA
GELKPDRGKIRFFGDDISADSVIQRTLKGLGRTYQVSTLVPSVTVRENLALARGDGRLPS
LWQPWQSRLDDDLMTTADQLGLTPVLDEAVANLSYGTLRQLELAMVMAQKPRLLLLDEPA
AGLSHAERQVLQGILKDLPQEVTLLMIEHDMEMVLALSDRISVLHQGEMFAEGSPDEIAA
HEGVRDIYLGRANG
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagctcagctttcgatgagcccagagccggcgctggaggtcgccggcctggcc
aagtccttcggctcgctgatggtggccagcgacgtgcatctgcgggtggcgccgggcgaa
cggcgtggcctgatcggggtcaatggcgccggcaagaccacgctgttcaacatgatcgcc
ggcgaactcaagcccgaccgggggaagattcgattcttcggcgacgatatcagcgcggac
tcggtcatccagcgtaccctcaaggggctgggtcgtacctatcaggtatcgaccctggtg
ccctcggtcacggtcagggagaacctggcgctggcgaggggggacggccggctgccatcg
ctgtggcagccctggcagtcgcgcctggacgatgacctgatgaccacggccgaccagttg
gggctgacgccagtgctcgacgaggcggtggccaacctctcctatggcaccctgcgtcag
ctggagctggccatggtgatggcccagaaaccgcggctgctgctgctcgacgagcctgcg
gccgggctctcccatgccgagcgccaggtgttacagggtattctcaaggacctgccacag
gaggtgacgctgttgatgatcgagcacgacatggagatggtgctggcactcagcgaccgt
atctcggtgttgcatcagggtgaaatgttcgccgagggttctcctgacgaaattgccgcc
catgagggcgtgcgtgacatctatctggggcgtgccaatggctga
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