Halomonas chromatireducens: LOKO_01070
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Entry
LOKO_01070 CDS
T04292
Symbol
waaA
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
hco
Halomonas chromatireducens
Pathway
hco00540
Lipopolysaccharide biosynthesis
hco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
LOKO_01070 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hco01005
]
LOKO_01070 (waaA)
Enzymes [BR:
hco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
LOKO_01070 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
LOKO_01070 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
LOKO_01070 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
LOKO_01070 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
hco01005
]
Lipid A
LOKO_01070 (waaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Glyco_trans_1_2
Glyco_trans_1_4
DUF6099
Motif
Other DBs
NCBI-ProteinID:
AMD00147
UniProt:
A0A0X8HCJ5
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All DBs
Position
complement(1130778..1132091)
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AA seq
437 aa
AA seq
DB search
MQRRGRPWARHLYSTALYLLSPLIWQRVWREQALTNPRRERLGLLPRRSAVEPGIWLHCA
SVGEVLAARPLIEALLARYPEHRLIVTTMTATGAERVLALSQALRESATPDAADGPLDHH
FVPLDFPGATRRFIDRLNPALAIFFETELWPNLLAACHQQGIPTAVVNGRLSPRAYRGYR
RLRPLMQDALSHVDWLAAKSAADAERYRSLGMAQVAIDVVGSLKYDLTPTAGTEALSRQL
SLRLGSRPVWAAGSTHPGEEELLLQAHARLRQHYPSALLILVPRHPQRFDAVAALCQERG
LAMARRSRDELPDARTAVYLGDTMGELLSLYGAADLAFVGGSLVPIGGHNLLEPAAMGVP
VLTGPELANFEDVAETLREAAALVEVPDSEALAEALVALFIDEAERHRLAEAGQAVMAAN
RGALGRTMSGLSALLGE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgccgaggccgaccctgggcacgccacctctattcgacggcgctctatctgctc
tcaccgctgatatggcagcgcgtctggcgtgagcaagcgctcacaaacccccggcgggag
cggctcgggctgttgccccgtcggtccgccgtggagcctggcatctggctgcactgcgct
tcggtgggggaagtcctggcggccaggccgctgatcgaggccctgctggctcgctacccc
gagcaccgcctgatcgtcaccaccatgaccgcgaccggcgccgagcgtgtcctcgccctg
agccaggcgctgcgagagtcggcgaccccagatgcggccgatggaccgctcgaccaccac
ttcgtgccactggactttcccggtgcgacccgccgcttcatcgaccggttgaatccggcg
ctggcgatcttcttcgagaccgaactctggcccaacctgctggcggcctgccaccaacaa
ggaataccgacggcggtggtgaatggacgtctctccccccgggcctaccgcggctatcgc
cggctgcgtccgctgatgcaggatgccctgagccacgttgactggcttgccgccaagtcc
gctgccgatgccgagcgttaccggtcgctgggcatggcccaggtggctatcgatgtggtg
ggctcgctgaagtacgacctgacacccaccgccgggaccgaggcattgagccgacagcta
agtctcagacttggctcgcgcccggtatgggccgccggctccactcacccgggcgaagag
gagctgctgctgcaggcccatgcccggctccgacaacattacccctcggccctgctgatc
ctggtgccccgccacccccaacgcttcgatgccgtggcggccctgtgccaggagcgcggc
ctggccatggcacgccgctcccgggatgagctgcctgacgcccgtacggcggtctacctg
ggcgacaccatgggggagctgctctctctctacggcgcggcggacctggccttcgtcggc
ggcagcctggtgccgatcggtggacacaatttgctggagccagcggccatgggggtgccc
gtgctcacgggacccgagcttgccaatttcgaggacgtggcggagacactgcgtgaagcc
gccgccctggtggaagtccccgacagcgaagccctggccgaggcgctggtcgccctgttc
atcgatgaagccgaacgccatcgtctggccgaggccggccaggcggtgatggcggcgaac
cggggcgccctggggcgcaccatgtccggtttgtctgcgctgctgggtgagtaa
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