Hippocampus comes (tiger tail seahorse): 109507447
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Entry
109507447 CDS
T04969
Name
(RefSeq) neurocan core protein-like isoform X1
KO
K06794
neurocan core protein
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hcq00535
]
109507447
00536 Glycosaminoglycan binding proteins [BR:
hcq00536
]
109507447
04091 Lectins [BR:
hcq04091
]
109507447
Proteoglycans [BR:
hcq00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
109507447
Glycosaminoglycan binding proteins [BR:
hcq00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
109507447
Lectins [BR:
hcq04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
109507447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
Sushi
V-set
hEGF
EGF_2
Chordopox_A33R
EGF_CA
UL45
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
109507447
NCBI-ProteinID:
XP_019712438
LinkDB
All DBs
Position
Unknown
AA seq
1229 aa
AA seq
DB search
MYWSGRRSKMALPRFAAGRHVFLTLLLLHWFGFGASSSIVNMRKVTHPTVQQPLAGEAVL
PCVFTLPNGSSAQSVRLLWTLVRLPAGGQDSPLEHVVLSAQGDVIKVNKAFSGRVRLPGY
AADPLNATMEISSLRTNDSGTYHCQVVMGNNYERDAVPLVVYGVVFHYQAPSTRYALSFA
DAQRACQENSAQMATSGQMWAAYYDGFASCAAGWLDDQTVRYSVQSTELDCSGHKEYSAG
VRNYGKRDPKELFDVYCFAKELDGEVFHASVPGRLSLSSASDRCVSLGGQLATVGQLYLA
WRAGLHSCAPGWLADGSVHYPVSLPRPDCGGNKPGVHTVTLNITSDNTTALYDTYCYRGK
VENTDTISQIYTSLWKPWSYLTDSSSVSTGTESPPAITTKDESGNSPSNWTGLVDLEEEE
EESLLSVNASSDPWSSESYISLRISPGQSIDWGEPFEPDSPEFLQPPVVPTPAEKKVISG
IIKSFWKPWNYLVGTGGGSEETTGTPKGTAGEEDVKKKHQKMKKEEEEEEEDRGNMTTTA
SPALFSWGSFLLSGTPKDDTTPANEELSTHVAPSSTASNNSLTTRTTISEETPQTRLSPT
STPVPETTSSRGETWLRVDTETTTQSSDKREITVMPRASSRGGRGRGKKNRGEDRSRGED
KGRGDDEGSGEITAAEAKGEIQVSRRPVGTSKPRERSRSRERGHRKGQTTTTATTSPPTT
TEPSVMSTSQIVDLAVSKLLLTVSTETQSSSIQADLDPISSTSSSSSSSSAPPPSSPPSS
APSAASPSSSASSSSSSPLSSSASTTSSFSTSTSTPSSSPSPAHTAQPIPTLSPSAASSP
PQTLGSGGLPAFPPADNQNSSANLEALLDWVPVESVAVLNISLDPHPEEEEEPAWSQTVG
SGSPLPGNMEEEGSRFNVSNITLVPAVEPCVTNPCLHGGKCLPQGTGYSCYCPQGYAGEN
CEIDVDDCQSEPCENGGTCIDKIDSFLCLCLPSYGGDTCEKDIEGCEHGWRKFHGHCYRY
FTHRHTWEDAEKDCREHSAHLSSVATANEQEFINGLGHDNAWVGLNDRTVEDDFQWTDGN
ELVYENWRESQPDNFFAGGEDCVVTIAHEDGKWNDVPCNYNLPYICKKGTVLCGTPPAVE
NAHLVGRRRSHYDIHAVVRYQCSEGFYQRHIPTARCRADGSWERPRIICAKSRRSHRYRR
HHRRERRERRGHRRHGEGHKARENAHSYD
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgtactggagcgggagaaggtccaagatggcgcttcctcggttcgcagccgggcgacac
gtcttcttgactctcttgttgctgcactggtttggctttggtgcatcctcctccatagtt
aacatgaggaaggtcactcatcctaccgtgcagcagccgttggcaggcgaagccgtgctc
ccatgcgtcttcactcttccgaacggctcatccgctcagtctgtccgactcctgtggact
ctcgtcagacttcctgcaggtggacaggactcccctctggaacatgttgtgctgtcagct
caaggtgacgtaatcaaggtgaataaggctttcagcggccgtgtcaggctgccaggatac
gccgccgatcccctcaacgctaccatggagatctccagtctgcgtaccaacgactcaggc
acttaccactgtcaggttgtcatgggcaacaactacgagagagacgccgtgcccctggtg
gtctacggtgtggtgtttcattaccaggctcccagcactcgttacgccctctccttcgca
gacgcccagcgagcctgccaagagaactcggctcagatggccacgtcgggccagatgtgg
gccgcgtactacgacggcttcgccagctgtgcagccggctggctggacgatcagactgtc
cgctattctgtccagtcaactgagctggactgctctgggcataaggagtactcagctgga
gtgaggaattatgggaaaagggaccccaaagagttgtttgatgtgtactgctttgcaaaa
gaactggatggcgaggtgtttcacgcctcagttcctggcaggttgtcgctgtcttcagcg
tcagaccgctgtgtgtccttggggggccagctggccactgtggggcagctttatctggcc
tggagggccggcctgcatagctgtgccccgggttggctcgccgatggcagcgtccactac
ccggtcagcctccctcgcccggactgcggagggaacaagccaggagtccacactgtcacg
ttgaacatcacaagtgacaacaccacagcgctgtatgatacatactgctacagaggtaaa
gtggagaacacagacaccatctctcagatctacacttccctgtggaagccctggagctac
ctcaccgattcgagtagtgtgtctacaggaacagagagcccacctgccattactactaaa
gatgagagtggcaattctccctcgaactggaccggactggtagaccttgaggaggaggag
gaggagtcgcttcttagtgtcaatgcttcctcagacccctggtcctcagagtcctacata
agccttcggatatctccgggtcaaagcatcgactggggagaaccatttgagcctgactcg
cctgaatttctccagcctcctgttgttccaacgcctgctgagaagaaggtcatctcgggg
attatcaaatccttttggaagccttggaactacctagtggggactggtggtggtagtgag
gaaacgactggaactcccaaaggaacggcaggtgaagaagatgtgaagaagaagcatcag
aagatgaagaaggaggaggaggaggaggaggaggatcgaggaaatatgaccaccacagca
tcaccagccttattttcctggggaagtttcctgttgagtggcacccccaaggacgatacg
actccagccaatgaagaattatccactcatgtggcaccttcttccactgcctccaataat
tccttgactaccaggacaaccatcagtgaggagactccgcagacgcggctgtcccccacc
tccaccccagtccctgaaacgacttcttctcgtggggaaacctggctgcgtgtagatact
gagaccacaacccagtccagtgacaagagggagatcaccgtgatgccccgagccagttcc
agaggaggaagaggcaggggcaagaaaaaccgtggggaggataggagcagaggagaagac
aagggaaggggagatgatgaaggaagtggagagattaccgccgccgaggccaaaggggag
attcaagtctcgcgacgcccagtcgggaccagtaaaccgagagaaaggtccaggtcgaga
gaaagaggtcacaggaaaggacagaccaccactacagcaaccaccagcccacccaccact
accgagccctccgtgatgtccacatctcagattgttgacctagccgtgtctaaactcctt
ttgaccgtttcaactgaaacacagtcctcatctatccaagcagacttggatcccatttct
tctacttcttcttcctcctcctcttcttctgctcctcctccttcttctcctccttcttct
gctccttctgctgcttctccttcctcttctgcttcttcttcttcctcttcaccattatca
tcctcagcatctacgacttcatccttttctacatcaacctcaactccaagctcgtctcca
tccccagcccacacagcccagccgataccgacactctccccgtcggccgcatcgtctcca
cctcagactcttggatcaggaggccttcccgcatttcctcccgcagacaaccagaacagc
tccgctaacctcgaggcactgctcgattgggttccagtcgagagcgtggcagttctcaac
atctctctggatccccatccagaggaggaggaggagcctgcctggtcccagactgtgggc
tcggggtccccattaccaggcaatatggaggaggaggggagcaggttcaatgtcagcaac
atcactctggtcccagctgtggagccctgcgtgacaaacccatgtctgcatggaggaaag
tgccttcctcagggaacaggctacagctgctactgcccacaaggctacgcgggggagaac
tgtgagattgacgttgatgactgccagtcggagccatgtgagaatggaggcacttgcatc
gacaagattgattctttcctctgcctttgcctgcccagttacggaggagacacgtgcgag
aaagacatagagggctgtgagcacggctggaggaagttccacggccattgctacaggtac
ttcacccacagacacacgtgggaagacgcggagaaagactgcagagagcacagcgcccac
ctgagcagtgttgccaccgccaatgagcaagagtttatcaacggtctcggccatgacaac
gcctgggtgggtctaaacgaccgcacagtggaggacgactttcagtggactgatggcaac
gaattggtgtacgagaactggcgggagagccagccggataacttttttgcaggaggcgag
gactgcgtggtgaccattgctcatgaggatggcaaatggaacgacgtgccctgcaactac
aatctgccttacatctgcaagaagggaacagtgttgtgcgggaccccacctgccgtggaa
aacgcccacctggtcggtcggcggaggtcacactatgacatccatgcggtggtgcgctac
cagtgctcggagggcttctaccagcgtcacattcccaccgcccgttgcagggccgacggc
agctgggagcgacccaggatcatctgcgccaaatcccggcgctcccaccgctaccgacgc
catcatcgccgagagcgccgtgagcgtcgcggccacaggaggcacggcgagggccacaag
gccagagagaacgcgcacagctacgactga
DBGET
integrated database retrieval system
