Hippocampus comes (tiger tail seahorse): 109508437
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Entry
109508437 CDS
T04969
Symbol
chd3
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 3 isoform X1
KO
K11642
chromodomain-helicase-DNA-binding protein 3 [EC:5.6.2.-]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109508437 (chd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcq03036
]
109508437 (chd3)
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
109508437 (chd3)
Chromatin remodeling factors
NuRD complex
109508437 (chd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
HDA2-3
ResIII
AAA_22
DEAD
zf-HC5HC2H_2
HMG_box
HTH_23
PHD_2
Motif
Other DBs
NCBI-GeneID:
109508437
NCBI-ProteinID:
XP_019713970
LinkDB
All DBs
Position
Unknown
AA seq
2157 aa
AA seq
DB search
MFLFKRRWSFSLAWDDDTSRCSRGRDPDERTIMSYPPRACEEDEGTVLHSEGGDFEEEDD
GDGGEFLDARSDINSPAAPRQTAAAPEEEAYTSDREVPCRKKGRPKKKKDAKKKDKEGKP
VRVKKRKKIDSDVERDSARDRDFGDHSDSVASGYGSGEKKKRKKHKEKKEKKTKRKKKDD
EERDSSQEETTRQPVEQKTSAQLAKEWGLEDVDHTFTEEDYRELTNYKAFSQYMRPMIAK
KNPKIPMSKMMTILGAKWREFSFNNPFKGNAAAVAAAAAAAAIAVAEQVSAATTSPAPLP
SAPQPPPIRKAKTKEGKGPGYKKRGKSPRVSDKKKALAVAKAKKMAPIRLKLSPVCAKRK
KSCSSDDLDEDESEQEDSSVHSSSVRSDSSGRVKKNKRGRPAKKKKKIPGDEDGDGYETD
HQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELEKAPEGKWSCPHCEKEGIQWEAKDEDF
EDFEEDAEERTMSEVGAGLEEEDDDDHMEFCRVCKDGGELLCCDTCTSSYHIHCLNPPLP
EIPNGEWLCPRCTCPPIKGRVQKILHWRWGEPPPPVPAPPPDVAPAPGAPPDEPPLPPPP
PPMKGRAEREFFVKLAGQSYWHCTWITELQLEIFHSVMYRNYQRKTDMDEPPGLDYGSGG
EDESAAGKSEKRRAKDPEFALMEDKYYKYGIKPEWMMIHRIINHSVDKKGMYHYLVKWRD
LTYDQCTWEQDHMDIPDFVIYKANYWRHRDAITKEDPDKPRRMRSKSQEGEGEDQPSPAS
PVTDPTIKYEEQPDFVTSTGGTLHLYQMEGLNWLRFSWAQGTDTILADEMGLGKTIQTIV
FLYSLFKEGHTKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKDSRAIIRENEFSF
DDSLAKGGKKPFKMRRETPIKFHVLLTSYELVTIDQTALKSIDWACLVVDEAHRLKNNQS
KFFRRLNDYKIDHKLLLTGTPLQNNLEELFHLLNFLTPNRFNNLDGFLEEFADISKEDQI
KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKLILTKNFEALNSKGGG
NQVSLLNIMMDLKKCCNHPYLFPVASMEAQKTPNGAYEGSALTKASGKLTLLQKMLRKLK
EQGHRVLVFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGACQFCFL
LSTRAGGLGINLATADTVVIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEER
ITQVAKRKMMLTHLVVRPGLGSKAGSMTKQELDDILKFGTEELFKDEGEGMKNSSGDKAE
DEGNVIHYDSTAIERLLDRSQDATDDSDVQNMNEYLSSFKVAQYMVREEDKIDEIEREII
KQEENVDPDYWEKLLRHHYEQQQEDLASKLGKGKRNRKPVNYNDAAQEDQEWHADISDNQ
SEYSVGSEEEDEDFDDRPEGRRHSRRQLRNEKDKPLPPLLARVGGNLEVLGFNTRQRKAF
LNAVMRWGMPSQDAFSSQWLVRDLRGKTEKEFKAYVSLFMRHLCEPVADGAETFADGVPR
EGLCRQPVLTRIGVMSLVKKKIQEFEHINGRWSLPELKPDVSLDKSSSRASSPTPKTATP
TPDASYNNTPCTSKPATPAPADKPEKNKKEGEREDKENGEAQSEKEKNDSKEGNKEPDAA
QSVSPPRLTTEGKDDEGKDTDGKDGDGNQPREEEEDEPIAPSPQERNLPDKCKVTTQQDG
QVQEEKEAPRLLDGEKAAEEQQKDTEKAEVADSKEDAETKKEETKDEMDPGKEFREAKAE
LPKGNGKLPAERPRFMFNIADGGFTELHTLWQNEERAAISSGKMSEIWHRRHDFWLLAGI
VIHGYARWQDIQNDLPFAIVNEPFKSQANKGNFLEMKNKFLARRFKLLEQALVIEEQLRR
AAYLNMTQDPSHPAMALNARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELL
SDMKADVTRLPATLSRVPPIAARLQMSERSILSRLASKGTETHAPPPIPPGPYATPQNYG
APFTPAPPGALLMGGANYSQMPPGSFISEAAGGANWGGGGGPAGGGGGGGGAVCQKTKEH
DVVQRQRVVDLWKDGKSEGAIGLELRMPKSTVHSIIVKYRLSNTVENLPRNGRPKKP
NT seq
6474 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgttcaagagacgctggagtttctccctagcctgggatgatgacacgtcacgt
tgttccagaggacgggatcccgatgagaggactatcatgtcctatcctccgcgggcctgt
gaggaagacgagggcacggtgcttcattccgagggaggagattttgaggaagaagacgac
ggcgacggcggagagtttttagacgcgagaagcgacatcaactcgccggcggcgcctcgg
caaactgcagccgccccagaagaagaggcgtacacatctgacagggaggtcccgtgtaga
aagaaaggacggccaaagaagaagaaggacgccaagaagaaggacaaagaggggaaaccc
gtgagggtgaaaaagcgcaagaagatcgacagcgatgtagagcgcgactcagcgcgggac
agagacttcggtgaccactcggacagcgtcgccagcggctatggctctggcgagaagaag
aagagaaagaagcacaaagagaagaaggagaagaaaaccaagaggaagaaaaaagacgat
gaggagcgagacagcagccaagaggagaccacgaggcagcccgtggagcagaagacctca
gcccagcttgcaaaggagtggggtttggaggatgttgatcataccttcaccgaggaagac
tacagggagcttaccaactacaaggccttcagtcagtatatgaggcccatgatcgccaag
aagaatcccaagattccgatgtctaagatgatgaccatcctgggtgccaagtggcgggag
ttcagtttcaacaaccccttcaaaggcaacgccgccgcagtggcggcggctgcggccgcg
gctgccatcgctgtcgccgagcaggtctccgcggcgaccacctcgcccgcgcctctgcct
tccgcgccgcaaccgccacccatccggaaggcgaagacgaaagaaggcaaagggccaggt
tacaagaagcgcggtaaaagtcctcgagtctctgacaagaaaaaggctttggctgtcgcc
aaggcgaaaaagatggcccccattcgtctcaaactttccccagtgtgcgccaagaggaag
aagagctgctccagcgacgacctggacgaagacgagtcagagcaggaggactccagcgtc
cacagctcctcggttcgctccgacagctccggccgcgtcaagaagaacaagcgcgggcga
ccggccaagaagaagaagaagatcccaggtgacgaggacggcgacggctacgagacggac
caccaggactactgcgaggtgtgccagcagggcggcgagatcatcctctgtgacacgtgc
ccgcgagcgtaccacctggtgtgcctggagcccgagctggaaaaggctcccgagggcaag
tggagctgccctcactgcgaaaaagaaggaatccagtgggaagcaaaagacgaagacttt
gaggactttgaagaggacgcggaggagaggaccatgtcggaggtcggggcggggttggag
gaggaggacgacgacgaccacatggagttctgtcgggtgtgtaaagacggaggtgaactg
ttgtgctgtgacacctgcacctcgtcctaccacatccactgtctaaacccgccactgcca
gagatccccaatggagagtggttgtgtccacgatgcacgtgcccgcccattaaaggacgc
gtgcaaaagatcctccactggcggtggggcgagccccctcctccggttcccgccccaccg
ccggacgtggcgcccgctccgggcgcgccgcccgacgagccgcccctgccgccgccgccc
ccgcccatgaagggccgagccgagcgggagttcttcgtcaagctggcgggacagtcctac
tggcactgcacatggatcaccgagctgcagttggagatcttccactcggtcatgtaccga
aactaccagaggaagacggacatggacgagccgcccggtttggactacggctccggcggc
gaggacgagagcgcggcgggcaaaagcgagaagcggcgcgccaaagacccggaattcgcc
ctcatggaagacaagtactacaagtacggcatcaagcccgagtggatgatgatccatcgc
ataatcaaccacagtgtggataaaaaggggatgtatcattacctggtaaagtggagagac
ctgacctatgaccagtgcacctgggaacaagaccacatggacatccccgactttgtcatc
tacaaggccaactactggagacacagggacgccatcacgaaggaagaccccgataaaccc
cggaggatgaggagcaagagtcaggagggcgagggcgaagaccagccttctcccgcttcg
cccgtcaccgacccgacgataaaatacgaggagcagcccgacttcgtgacgtcgacggga
ggcacgctgcacctgtaccagatggagggtctcaactggcttcgcttttcctgggctcag
ggcaccgacaccatcctggcggacgaaatgggtctgggcaagaccatccagaccattgtc
ttcctctactcgctctttaaggagggtcacaccaaaggtcccttcctggtcagcgccccg
ctgtccaccatcatcaactgggagcgggagtttgagatgtgggcgcccgacttctacgtg
gtcacctacacgggcgacaaggacagccgagccatcatccgtgaaaacgagttctccttc
gatgactcgctcgcgaagggtggcaagaagcccttcaagatgaggagagagacaccgatc
aagttccacgtgctgctgacctcttacgagctggtgaccatcgaccagacggcgctgaag
tccatcgactgggcctgcctggtggtggacgaggctcaccgccttaaaaataatcagtcc
aagtttttccggcgtctgaacgactacaagattgaccacaagctgctgctgacgggaacg
ccgctacagaacaacctggaggagcttttccacctgctcaatttcctcacgcccaaccgc
ttcaacaacctggacggctttctggaggagtttgccgacatctccaaggaggaccagatc
aagaaactgcacgacctgctggggcctcacatgttgcggcgcctcaaggctgacgtcttc
aagaacatgcccgccaagaccgagctcatcgtgcgggtggaactcagccccatgcagaaa
aaatactacaagctgattttaaccaagaactttgaggctctgaactccaaaggcggggga
aaccaggtctcgctgctcaacatcatgatggacctgaagaagtgttgcaatcatccctac
ctcttccccgtcgcctccatggaggcccagaaaacacccaacggcgcttacgagggctcc
gccctcacaaaggcgtccgggaaactgaccctgctgcagaagatgctgcggaaactcaag
gagcagggacaccgagtgttggttttctcacagatgactaaaatgctggacttgctggaa
gacttcctggattacgaaggttataagtatgaaaggatcgacggcgggatcaccggagcg
cttcggcaagaagccatcgaccgcttcaacgctcccggcgcgtgtcagttttgtttcctg
ctctccacccgggccggaggtttgggcatcaacttggccacagcggacaccgttgtcatc
ttcgattccgactggaaccctcacaatgacattcaggccttcagtcgggctcaccgcatc
gggcaggccaacaaggtgatgatctaccgctttgtgacgcgagccagcgtggaggagcgc
atcacgcaggtggccaagaggaagatgatgctgacccacctggtggtccggcccggcctg
ggctccaaagccggctccatgaccaagcaggaactggacgacatcctcaagtttggaacc
gaggagctcttcaaagatgaaggagaaggtatgaagaattcctcgggggataaagctgag
gacgagggcaacgtgatccactacgacagcacggccatcgagaggctgctcgaccgaagc
caggacgccaccgacgactcggacgtccagaacatgaacgagtacctcagctccttcaaa
gtggcccagtacatggtccgagaggaggacaagatcgatgagatcgagcgagagatcatc
aagcaggaggagaacgtggatcccgactactgggagaagctgttgcggcaccactacgag
cagcagcaggaggacctggccagcaaactgggcaaaggcaagaggaatcgcaagccggtc
aactacaatgacgctgcgcaggaagatcaagagtggcatgccgatatttccgacaaccag
tccgagtactccgtgggctccgaggaggaggacgaggactttgacgaccgtccggaaggc
cggagacattcccgtcgccagttgaggaacgagaaggacaaaccgctccctcctcttctg
gccagggtgggcggcaacctcgaggttcttggcttcaatacacgccagcggaaggcgttc
ctgaatgcggtgatgcgctgggggatgccgtctcaagacgccttctcctctcagtggctg
gtcagagacctcagaggcaagactgagaaggaattcaaagcgtacgtgtcgctcttcatg
cgtcacttgtgcgagccggtggccgacggtgcggagacgttcgccgacggcgtccccagg
gagggcctgtgtcgccagccggtcctcacgcgcattggcgtcatgtcgctcgtcaagaag
aagattcaggaatttgagcacatcaacgggcgctggagtctcccggagctcaagcccgat
gtcagcttggacaaatcctcctccagggcatcgtcccccactcccaagaccgcaacgccc
acgccggacgccagctacaacaacacgccgtgcacctccaagccagcgacacccgcgcca
gcagacaagcccgaaaagaacaagaaggagggcgagagggaggacaaggagaatggcgaa
gcccagtctgagaaggagaaaaatgacagcaaagagggaaacaaagagcctgacgctgcg
caaagcgtatctcctccccgactgacaacggagggaaaagacgacgaaggcaaagacact
gacggcaaagacggtgatggcaaccaaccgcgtgaggaggaggaggacgaaccaatcgcc
ccctcaccacaggagaggaatttgccagacaaatgcaaagtaacaacccaacaggacggg
caggtgcaagaagagaaagaagctcctcgtctcttggatggcgaaaaggcggccgaggag
cagcaaaaagacacggagaaggcggaagtagcagactccaaggaggacgccgaaaccaag
aaagaggaaacgaaagatgaaatggatcctgggaaagaattccgagaggcgaaggcggag
ttgcccaaagggaacggcaaactgcctgctgagcggcctcgcttcatgtttaacattgct
gacggcggtttcactgaactacacactctttggcagaacgaggagcgggccgccatctcc
tcggggaagatgagcgaaatctggcaccgccgccacgatttctggctcctggcaggaatc
gtcatccacggctacgctcggtggcaggacatccagaacgatctgccgttcgccatcgtc
aacgagccctttaagtcgcaggccaacaaaggcaacttcctggagatgaagaacaagttc
ctggctcggcgcttcaagctgctggagcaggctctggtcatcgaggagcagctgcggcgc
gccgcctacctgaacatgacgcaggaccccagccacccggccatggcgctcaacgcgcgc
ttcgccgaggtggaatgcttggctgagtcgcaccagcacctcagcaaggagtcactggcg
ggcaacaagccggccaacgccgtcctgcacaaagtgctcaaccagctggaggagctgctg
agcgacatgaaggccgacgtgacccggctgccggccacgctgtcccgagtgccgcccatc
gccgcgcgcctgcagatgtccgagaggagcatcctgagccggctggccagcaagggcacg
gagacgcacgcccccccgccgatccctcccggaccctacgccacccctcagaactacggc
gcccccttcaccccggccccccctggcgccctcctcatgggcggggccaactacagtcag
atgccgcccggatccttcatatcagaagccgccggcggagccaattggggaggcggcggg
gggccagccggcggcggtggcggcggcggcggcgccgtgtgccagaagaccaaggaacac
gatgtggtgcagcggcagcgggtggtggacctgtggaaagacggcaagtcggagggggcc
atcggcctggagctgcggatgcccaagtcgacggtgcacagcatcatcgtcaagtatcgg
ctcagtaacacggtggagaacctgccgcgcaacggtcgccccaaaaaaccctga
DBGET
integrated database retrieval system
