Hippocampus comes (tiger tail seahorse): 109510878
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Entry
109510878 CDS
T04969
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109510878 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109510878 (exosc5)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109510878 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
109510878
NCBI-ProteinID:
XP_019717111
UniProt:
A0A3Q3DKG4
LinkDB
All DBs
Position
Unknown
AA seq
237 aa
AA seq
DB search
MIMSDAIFSRPTHTFDGMMEECSPSTVSIREFGCEQNLLSRSDGSASFIQGNTSVLAAVY
GPAEVKVSKEIYDRATLEVIIQPKVGLPSVKERAQEQCVRETCEASLLLSLHPRSSLTLV
LQELHNDGSLLSCFLNAGCMAMMDAGLPMSCLFCGVTCAIHTDGTIITDPTAAQEAESRA
LMTFAIDSKEHQVMMTSTKGSFSVQEMQQCIAVSQAASEKIFSFHRESLRRRYSKSV
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgagtgacgcaattttctcgcgaccaacacacacatttgacggcatgatggag
gagtgtagtccgtccacggtttccatccgagagtttggctgcgagcaaaatttactgtct
cgttcagacggttcggcgtctttcatacaaggtaataccagtgtgctggctgcagtgtac
ggaccagctgaagttaaagtcagtaaggaaatttatgacagggcgacgttggaggtgatc
atacaacccaaagttggacttccaagtgtgaaggagcgagctcaggagcaatgcgtgcga
gaaacctgcgaggcatccctactgctgtcccttcaccctcgatcatccctcacgctggtt
ttacaggagctccataacgatggctctctattgtcctgcttcctcaacgccggctgcatg
gctatgatggacgccggcttgccgatgagttgcctgttctgcggtgtcacctgcgccatc
cacacggatggaactatcatcaccgacccgaccgctgctcaggaagcggagagtcgagcg
ctgatgaccttcgccatcgacagcaaagagcaccaagtgatgatgacctcaaccaaagga
tcgttttcagtacaagagatgcagcagtgcatcgctgtcagtcaggcggcgtccgaaaag
atcttcagcttccacagagagtcactcaggcggcgttactccaaaagcgtctga
DBGET
integrated database retrieval system
