Hippocampus comes (tiger tail seahorse): 109511487
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Entry
109511487 CDS
T04969
Symbol
fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109511487 (fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109511487 (fip1l1)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109511487 (fip1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
109511487
NCBI-ProteinID:
XP_019718188
UniProt:
A0A3Q2Y581
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MSAAEEADKTAATDASAGDEEEEWLYGDETESKEEEEEAKQTAADSAPAEAPSEEAAEHA
TGNGVASESQATEDAAGDDAESDSDSDDDDDDVRVTIGDIKTGAPQYTSYGAPPVNLNIK
TPGSRSYGQVTTKVKGVDLEAPGNINGVPVLEVDMESFEEKPWRKPGADLSDYFNYGFNE
DTWKAYCEKQKRLRMGLEVSTVGSATSKITVQQGRTGNEKEISSLALHTSKSDFTSPVSL
YKSVTSQVPRISPPQWTGPPVPDMSYYTKTSGTIDVIGGGTATISRVEGRRRHNLDGNNI
QVISEHATSDADTAATKMPTFFPPGPLPPNIPPPPFLPPPPNVSSAPPLIPPPRLPITVP
PPGFPPPPSGPPPSIIPTMDSHAGGYDGRSIPPYAFPQGAYPPPISGGVPTSWPPLMDNS
KPWDYYSRRDDKREKERERPRERTHERERERERERDHSPSVIGYTSDEERYRYREYQERG
YTDRHRERASREKEDRHRERRHREKDEGRHKSSRSSSSRRRHDSEEADSHRRHKHKKSKR
SKEGKEASEDMGADQENQEAME
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgccgaagaagcggacaaaacggccgctacggatgctagcgctggtgacgag
gaggaagaatggctgtatggagatgaaaccgagagcaaagaagaggaagaagaagccaaa
cagactgctgctgacagtgctcctgctgaggccccatctgaggaagctgccgaacatgcc
acaggaaacggcgtggcgtccgagtcacaggccactgaggacgccgcaggtgatgatgcg
gagagtgacagcgacagtgatgatgatgatgacgacgtccgtgtcaccattggagacatt
aaaaccggggctccacaatacacatcatatggggcgcctcctgtcaatctcaacattaaa
acacctggctccagatcttatggacaagttaccacaaaagtgaaaggagtcgatcttgag
gctcctggtaacattaacggtgtcccggtgcttgaagtggatatggagtcgtttgaggaa
aagccctggaggaaaccgggggcggatttgtctgactacttcaactatggctttaacgaa
gacacgtggaaggcttactgtgagaagcaaaaacgattgcgtatgggcctggaagtctca
accgtcggctcggcgacgagtaaaatcactgtccaacaaggcaggacaggcaacgagaag
gagatctccagtcttgctcttcacacgtccaaatcagacttcacctctccagtcagcctg
tacaagtctgtcaccagtcaggtccccaggatctccccccctcagtggactggcccgcct
gtcccggatatgtcctattatacgaagacgagcggtaccatagatgtgattggcggaggg
acggccaccatcagtagggtcgaaggtcggcgcaggcacaatcttgatggcaataacatc
caggtgatctctgaacacgccacatcagacgccgataccgccgccacgaagatgcccacc
ttctttccccccggaccgctgcctccaaacatccccccgcctcctttcctcccgccgcca
cccaacgtcagctcggcaccgccgctcatcccgcccccccggttgcccatcactgttccc
cctcctgggtttccgcctccacctagtggccccccaccttcaatcattccgactatggac
agccatgctggaggttacgacggacgctctatcccgccatatgccttccctcaaggtgcc
taccctccccccatttctggaggggtgcccacttcttggcccccgttgatggacaactcc
aaaccgtgggactactattcccgccgggatgacaagcgagagaaggagagagagcggcca
cgagagaggacgcatgagcgggagagggagcgggagcgagaacgtgatcatagcccctca
gtgattggctacacaagcgacgaggagcggtaccgttaccgcgagtaccaggaacgcggg
tacacagaccgccatcgtgagcgggcgagccgcgagaaggaggaccgacaccgggagagg
cggcatcgggagaaagacgagggacgccacaaatcttctcgcagcagcagcagcaggaga
aggcatgacagtgaagaggccgacagccaccggaggcacaaacacaagaagagcaagagg
agcaaggagggcaaagaggccagcgaggacatgggcgccgaccaagagaaccaggaggcc
atggagtga
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