Hippocampus comes (tiger tail seahorse): 109513358
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Entry
109513358 CDS
T04969
Name
(RefSeq) neurexin-1a isoform X1
KO
K07377
neurexin
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109513358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109513358
Membrane trafficking [BR:
hcq04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
109513358
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
109513358
NCBI-ProteinID:
XP_019721314
LinkDB
All DBs
Position
Unknown
AA seq
1485 aa
AA seq
DB search
MSVMAMCAWAAAPLLFLGLCLCSAGGQAQGEVLEFGGVSSQWGRFPVWNACCESVLSFSL
RTHSQEGLLLYLDDEGFCDFLELLLLRGHLRLRFSIFCAEPAELRSGVAVSDGRWHAVRV
RRDWKNTSLEVDGRLEGWAEVKSKRRDMTVFSHTYVGGVTAELRASPLRLTAPSVRDHPA
FRGWMGALSINGSLAVLDASEGVTVTAGCGPEHQCQNGGVCSLVDDRAVCDCSDTGYQGN
DCSEEHSYTPGLAHLMIGDQAREEYVATFKGSEFFCYDLSPNPIQSSSDEITLSFKTLQR
NGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLR
QHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGC
LKEVVYKNNDVRLELSRLAKQGDPKMKVSGVVSFKCESVATLDPVTFDTPESFVALSKWT
AKKAGSISFDFRTTEPNGLMLFSHGKPRQMQRKDPRTPPTVKVDFFAIEMLDGHLYLLLD
MGSGTTKTKAIDRKVNDGEWYHVDFQRDGRSGTISVNSVRTAYTAPGDNEILDLDDTLYL
GGLPEDRAGLIFPTEVWTALLNYGYVGCIRDLFVDGQSKDIRRLAEAQRAVGVKPSCSRE
PPKQCLSNPCQHNGVCREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMKVQLPMAM
HTEAEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCTASKGP
ETIFAGSGLNDNEWHTVRVVRRGKGLKLTVDDLQPVEGQMAGDHTQLEFHNVETGIVTEK
RFMPAVPSNFIGHLQGLALNGMPYIDLCKNGDIDYCELNAVIGYKSIVADPVTFRSRSSF
VTLPTLQAYYSMHLFMQFKTTSPDGLVLFNRGNGNDFIVVELVKGYLHYISDLGNGAHLI
KGNSNSPLNDNHWHNVHISRDTNNLHTVKIDTKVTTQTTMGAKNLDLKGDLYIGGVSKEM
YRDLPKLVHSREGFQGCLATVDLNGRLPDLLADALATVGQVERGCEGPSTTCQEDSCSNQ
GVCLQQWEGFTCDCSMTSYAGPLCNDAGTTYIFGRDGGVVVYTWPPNERPSTRADRLALG
FSTQQKHAILLRVDSASGLGDYLQLQIDKGNIRVVFNVGTDDINIEESSKFVNDGKYHIV
RFTRSGGNATLQLDDLPVIERYPSGNIDNERLAIARQRIPYRLGRVVDDWLLDKGRQLTI
FNSQTTVRVGGGGERRAGMFQGQLSGLYYNGLRILNMAAEGHPHIRVEGSARLVGDMPSS
SITPQSSAAAGSNRSDSAPASGDVSTTTASNRKQGATQQSADDILVASAECPSDDEDIDP
CDPSSARPPLPEVKVFPGPSEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEG
SYHVDESRNYISNSATQPNGSAKDKPLGITKISKNKKNKDKEYYV
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgatggccatgtgcgcttgggcggcggcccctctgctcttcctgggcctttgc
ctgtgcagcgcggggggccaggcccaaggcgaggtgctggagttcggcggcgtgtccagc
cagtggggccgcttccccgtgtggaacgcgtgctgcgagagcgtactgagcttcagcctg
cggacacacagccaagagggcctgctgctctacctggacgacgagggcttctgcgacttc
ctggagctgctgctgctgcgcggccacctgcgcctgcgcttctccatcttctgcgccgag
ccggctgagctgcgctcgggtgtcgcggttagcgacggtcgctggcacgcagtgcgtgtc
aggcgggactggaagaacacctctctggaagtggacgggcggctggagggttgggcggag
gtgaagagcaagcggagagatatgactgtgttcagccacacctacgtgggtggggtgacg
gccgagctgcgcgcctcgcctctccgtctaaccgcgccgtcggtgcgcgaccaccccgca
ttccgcggctggatgggggcgctgagcatcaacggctcgctggctgtgctggatgcctcc
gagggcgtgacggtgacggcgggctgcgggccggagcaccagtgccagaacgggggcgtg
tgcagcctcgtcgatgaccgggccgtctgcgactgctctgacaccggttaccaaggcaac
gactgcagtgaagagcacagctacaccccaggtctggcacacctgatgattggcgaccaa
gcacgcgaggagtacgtggccaccttcaagggctccgagttcttctgctacgacctgtcg
cccaaccccatccagtcgagcagcgacgagatcacgctctccttcaagacgctgcagcgc
aacgggctgatgctgcacacgggcaagtcagccgactacgtcaacctggcgctgaagaac
ggcgccgtgtcgctggtcatcaacctgggctcgggcgccttcgaggccctggtggagccc
gtcaacggcaagttcaacgacaacgcctggcatgacgtcaaggtcacccgcaacctcaga
cagcactcaggcattggacacgctatggtgaccatctcggtggacggcatcctgaccacc
acgggctacacgcaggaggactacaccatgctgggctccgacgacttcttctacgtgggt
gggagccccagcacggccgacctgcccggctctccagtcagcaacaacttcatgggctgt
ttgaaagaggtggtgtacaagaataacgatgtgcggctggagctgtctagactcgctaaa
cagggagacccaaagatgaaggttagcggcgtggtttccttcaagtgcgagagcgtggcc
acgctggatcccgtcaccttcgacacgcccgagtccttcgtggcgctcagcaagtggacg
gccaagaaggcgggctccatctccttcgacttcaggaccaccgagcccaatggcttgatg
ctcttcagccatgggaagccacggcagatgcagcgcaaggaccctcgcacgccgcccacc
gttaaggtggatttctttgccatcgagatgctggacggccacttgtacctgttgctggac
atgggctcaggaaccaccaaaactaaagccatcgacaggaaggtcaacgacggggaatgg
taccacgtggactttcagagggatggacgctcagggaccatctcggtgaacagtgtgaga
acggcgtacacggcgcccggtgacaacgagatcctggacctggatgacacgctttacctt
gggggtcttcccgaggaccgtgccggactcatcttccccacggaggtgtggacggcgctg
ttgaactatggctatgtgggctgcatccgcgacctgttcgtggatggccaaagcaaagac
atccggcggctggccgaggcccagcgtgcggtgggcgtgaagccgtcgtgctccagggag
ccgcccaagcagtgcctgtccaacccctgccagcacaacggcgtctgccgcgagggatgg
aaccgctatgtctgcgactgctccggcaccggatacttgggacgctcctgtgagagagac
gcgaccatcctgtcgtacgacggcagcaagtttatgaaggtgcagctgcccatggccatg
catacggaggcggaggacgtgtcgctgcgcttccgctcccagcgggcctacggcgttctc
atggcaaccacgtcccgcaactcggccgacaccctgcgcctggagctggacggcggccgc
gtgcgcctcaccgtcaacctagactgtatcaggataaactgtactgccagtaaaggccca
gagaccatctttgcgggctcgggtctcaatgataatgagtggcacacggtgcgggtggtc
cggcgcggcaagggcctcaagctcaccgtggacgacctgcagcccgtcgaaggtcaaatg
gcgggcgaccacacgcaactggagttccacaacgtggagacgggcatcgtgacggagaag
cgcttcatgccggccgtgccgtccaacttcatcgggcacctgcagggcctggcgctcaac
ggcatgccctacatcgacctgtgcaagaacggcgacattgactactgcgagctcaacgcc
gtcatcggctacaagagcatcgtcgccgacccggtcactttccgatcgcgctccagcttc
gtcacgctgcccacgctgcaggcctactactccatgcacctcttcatgcagttcaagacc
acctcgcccgacggcctcgtcctcttcaaccgtggcaacggcaacgacttcatcgtggtg
gaactggtcaaaggataccttcactatatctcggacctgggcaacggggcccacctgatc
aagggcaactccaacagccccctgaatgacaaccactggcacaatgtgcacatctcccgg
gataccaacaacctccacaccgtcaagatcgacaccaaagtcaccactcagaccaccatg
ggcgccaagaacctcgacttgaagggtgacttatacatcgggggcgtgtccaaagagatg
taccgcgacctccccaagctggtacactcccgtgagggcttccagggctgcctggccacc
gtcgacctaaacggccggttgcccgacctcctggctgacgcgctggccaccgtggggcag
gtggagcggggctgcgaaggtcccagcacgacatgccaagaggactcgtgctccaatcag
ggcgtttgcctgcagcagtgggagggattcacttgcgactgcagcatgacgtcgtatgcc
ggaccgctctgcaacgatgccggcaccacatacattttcggccgcgacggcggcgtggtg
gtctacacgtggccccccaacgagcgccccagcacacgggccgaccggctggccctgggc
ttcagcacgcagcagaaacacgccatcctactacgtgtggatagcgcgtccggcctggga
gactacctccagctgcagatagacaagggcaacatccgtgtggtgttcaacgtgggcacg
gatgacatcaacatcgaggagagctccaagttcgtcaacgacgggaagtaccacatagtg
cgcttcacccgcagcggcggcaacgccacgctgcagctggacgacctgcccgtcatcgag
cgctacccctcaggcaacattgataacgagcgcctggccatcgccagacagcgaatcccc
tatcggctcggtcgagtagttgacgattggctactcgacaaaggtcggcagctgaccatc
ttcaacagccagacgacggtgcgcgtgggcggcggcggcgagcggcgcgccggcatgttc
cagggccagctgtcgggcctgtactacaacggcctgcgcattctcaacatggcggccgag
ggccacccgcacatccgcgtggagggcagcgcccggctggtgggcgacatgccttcctcc
tccatcacgccgcagtccagcgccgccgccgggagcaaccgctccgactcggcgcctgcc
agcggggacgtcagcaccaccaccgccagcaacagaaagcagggcgctacacaacagtca
gcggacgacatcctggtggcgtcggccgagtgcccgagcgacgacgaagacatcgacccg
tgcgatcccagctcagcgcgtcccccactccccgaggtgaaggtgttccccggcccttcg
gaggtggtgcgcgagagcagcagcaccacgggcatggtggtgggcatcgtggcggcggcg
gccctctgcatcctcatcctgctctacgccatgtacaagtaccgcaaccgcgacgagggc
tcgtaccacgtggacgagagccggaattacatcagcaactcggccacgcagcccaacggc
agcgccaaggacaagccgcttggcatcaccaagatctccaagaacaagaagaacaaggac
aaggaatactatgtctaa
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integrated database retrieval system