Hippocampus comes (tiger tail seahorse): 109515384
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Entry
109515384 CDS
T04969
Symbol
chd4
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4 isoform X1
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109515384 (chd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcq03036
]
109515384 (chd4)
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
109515384 (chd4)
Chromatin remodeling factors
NuRD complex
109515384 (chd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
ResIII
HDA2-3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
109515384
NCBI-ProteinID:
XP_019724692
LinkDB
All DBs
Position
Unknown
AA seq
1953 aa
AA seq
DB search
MSGSDDDRDDFGAAEEHSLLHDEPEEIMSDLDEVPKSKKKKKAKKSSRESRSNKRQRVVR
EELPLSSPEHLIEGEGTERDPDEGGLRSDSDGSDYAPGRKKKKRSSSTKDKKKSSASAEK
GGSSKSKRKDPEPDDDEDDDDDCQPKSSSQMLEAWGMKDIDHIFTQEDYNSLTNYKAFSQ
FVRPLIAAKNPKIAVSKMMTLMMAKWREFSTNNPHKGSASANAALAAANVAAAVENMVVA
GADGGADGGPVPPAAQTPPAAPAATPPPPPLRKAKTKEGKGPNARKKSKPKVPPKPKPKK
VAPLKIKLGGLNSKRKRSSSDEDVDSDFDESGFSVSEGSTRASRNKKKSKSAKKKKKVET
EDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGI
QWEAREDLSDGEVEDEDDRQDDGAEEEDDHHIEYCRVCKDGGELLCCDTCPSSYHIHCLN
PPLPEIPNGEWICPRCKCPPMKGKVQKVLTWHWGELPAPTPVPRPADLPADAPDPPPLVG
RREREFFVKWCNMSYWHCSWVLELQLELNCQVMFRNYQRKTDMDEPPPVDFGGEGDDDKS
TKRKNKDPLFVHMEAEFYRYGVKMEWLMIHRILNHSVDRKGNVHYLIKWRDLAYDQSTWE
SEDMDIPEFDLYKQTYWNHRELMIGDEGRPGKKLKKPVKVKKTERPPANPVVDPTIKFDR
QPDYLDSTGGTLHPYQLEGLNWLRFSWAQATDTILADEMGLGKTVQTAVFLYSLYKEGHS
KGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFEGNAIRGGKKA
SKMKKDSTVKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNNYPL
QHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIAKEDQIKKLHDMLGPHM
LRRLKADVFKHMPSKTELIVRVELSPMQKKYYKFILTRNFEALNTRGGGNQVSLLNVVMD
LKKCCNHPYLFPAAATEAPKLPNGMYEGLALTKASGKLMLLHKMMKKLKEGGHRVLVFSQ
MTKMLDLLEDFLENEGYKYERIDGGVTGNMRQEAIDRFNAPGAPQFAFLLSTRAGGLGIN
LASADTVIIYDSDWNPHNDIQAFSRAHRIGQNRKVMIYRFVTKASVEERITQVAKKKMML
THLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEAGEGDNKEDDSSVIHYDDQAIDRL
LDRNQDATDDTEIQSMNEYLSSFKVAQYVVKDEDDEEEEVEREVIKQEESVDPDYWEKLL
RHHYEQQQEDLARNLGKGKRTRKPVNYNDGSQEDRGIRQDWQEDQSDNQSDYSVASEEGD
EDFDERSEANARRPNRKGLRNDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNVVMRYGM
PPQDAFNNQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVL
TRIGVMSLIRKKVQEFEHVNGQWSMPWMAELEENKRAAALAAGEDPKTPSSGTPADTQPN
TPVPEDLSRSEDKEDIKKDAEDTKVARKPDDPEIIEIPDESDKSPASESKDDDLAGKEEK
EKETRGADEGNNGTDLSKDREEKGDKAVPADVKGEGTEDKTDAEDRSKGEDAKDEKMDTD
KDQQEDKDGVKSEESSRLQNGENTREGALSVLNVSEEKRKASKQRFMFNIADGGFTELHS
LWQNEERAATVTKKTFEIWHRRHDYWLLAGIIQHGYARWQDVQNDVRFAILNEPFKGEMS
RGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNMTEDPAHPSMALNTRFSEVECLAE
SHQHLSKESMSGNKPANAVLHKAGGAAERHEGGRHAPSGHHRQDTARGRAAANVREEHPQ
QAGQPRARGDRPEPVAERAADAGFALRRELFTA
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcagcgacgatgacagggacgacttcggggccgccgaagagcactcgctactc
cacgacgagccggaggagatcatgtccgacttggacgaggttcccaagtccaagaagaag
aagaaggccaagaagagcagcagggagagcagaagcaacaagaggcaaagagtcgtcaga
gaggagttgccgctgagctctcccgagcacttaatcgaaggcgagggaacagagagggac
ccggatgagggaggcctgcgctcggacagtgacggaagcgattacgccccgggaaggaaa
aagaaaaaacgctccagctcgaccaaagacaagaagaaatccagtgcgtctgcggagaaa
gggggctcgtccaagagcaagcgcaaagatccagagccggatgatgacgaagatgacgat
gacgactgccagccgaaaagctcctcccagatgctggaggcctggggcatgaaagacatc
gaccacatctttactcaggaagactacaactcactcaccaactacaaggccttcagtcag
tttgtcaggcccttgatcgcagccaagaaccccaaaatcgctgtgtccaagatgatgact
ttaatgatggccaagtggagagagtttagcacaaacaacccccataagggctcggcgtcc
gccaatgcggccttggcagctgccaatgtggccgcagctgtggagaacatggtggttgcc
ggggcagatggaggggccgacggtggtcccgtaccccccgccgctcagacgccgccggct
gctccggcggcaaccccgccgccacctccgctgcgcaaggccaaaaccaaagaaggcaaa
ggcccgaacgctcgtaaaaagtccaagcctaaagttccgccaaagcccaaacccaagaag
gtggctccgctcaagatcaaactgggaggcctgaacagcaagaggaagcgctcctctagc
gacgaggatgtggacagtgactttgacgaaagcggcttctccgtgtcagagggctccacc
cgcgctagccgcaacaagaagaaatccaagagcgcgaagaaaaagaagaaagtggagacg
gaggatggcgacggctacgagacggaccaccaggactactgtgaggtgtgccagcagggc
ggcgagatcattctgtgcgacacctgccccagggcttatcacatggtctgcttggaccct
gacatggagaaggcacccgagggcaagtggagctgcccacactgcgaaaaggagggcatc
cagtgggaagccagggaagacctctctgacggcgaagtggaagacgaggacgacaggcag
gacgacggcgcagaggaagaggacgaccatcacatcgagtactgcagggtgtgcaaggac
ggaggggagcttctctgctgcgacacttgcccctcgtcctatcacatccactgtctcaac
ccgcccctccccgagatccccaacggcgagtggatctgccctcgctgcaagtgtccaccg
atgaagggtaaagtccagaaggttttaacgtggcattggggagagctacccgcccctacg
ccggttccccggcctgccgacctgccggctgacgctcccgatcccccgccattggttggc
cgccgggagcgggagttctttgtcaaatggtgcaacatgtcctattggcactgctcctgg
gtgctggagttacagttggagttgaactgccaggtgatgttccgcaactaccagaggaag
accgacatggacgagccgccgcctgtggactttggcggcgagggcgacgatgataagagc
accaagaggaagaacaaggatccgctctttgtccatatggaggcggagttctaccgctac
ggagtcaagatggagtggcttatgatacaccgcatcctcaaccacagtgtggacaggaag
ggcaacgtgcactacctgatcaaatggcgagatctggcctacgaccagtcgacgtgggag
agcgaagacatggacatccccgagtttgacctttacaagcagacctactggaatcacaga
gagctaatgattggtgatgagggcagacccggtaagaagctgaagaaacctgtcaaagtt
aagaagacggagcgtccacctgctaatccagtggtcgaccccaccatcaagtttgaccgt
cagcctgactacctggacagcaccgggggtacgcttcacccctaccagctggagggcttg
aactggctcaggttttcttgggctcaggccaccgacaccatccttgccgatgaaatgggc
ttaggcaagacagtccagaccgctgtcttcctctactccctttacaaggagggtcactcc
aaaggtccctttctggtgagcgcccctctctccaccatcatcaactgggagcgagagttc
gagatgtgggccccggacatgtacgtggtcacgtacgtcggcgacaaggacagcagagcc
gtcatccgagagaacgagttttctttcgaagggaatgccatccgaggtgggaaaaaagca
tccaagatgaagaaagactcgacggttaagtttcatgtcctgctgacgtcctatgagctg
attaccattgaccaggctgtgctgggctctattgaatgggcctgtctggttgtggacgag
gctcacaggctgaaaaacaaccagtccaagttcttccgagtgttgaacaactacccgctg
caacacaagctgctgctgaccggcacgcctcttcagaacaacctggaggagctcttccac
ttgctgaacttcctgacgccagagagattcaacaacttggaaggttttctagaagagttt
gccgacatcgccaaagaggaccagatcaagaagctccacgacatgctgggaccgcacatg
ctcaggaggctgaaggccgacgtcttcaagcacatgccgtccaagaccgaactcattgtc
agagtggagctcagccccatgcagaagaaatactacaagtttattttaacacggaatttc
gaggccttgaacacccgcggaggaggaaaccaagtctctctgctcaatgtggtgatggat
ctgaaaaagtgctgcaatcatccgtacctttttcctgctgccgctaccgaggctccaaaa
cttcccaacgggatgtatgagggcttggccctgaccaaggcatccggcaagctgatgctc
ttgcacaagatgatgaagaagctgaaggaaggaggtcacagagtgctggttttctcccag
atgaccaaaatgctcgacctgctggaggactttctggaaaacgagggctacaaatacgag
agaattgacggcggggtcaccggcaacatgcggcaggaggccatcgaccgctttaatgct
cccggggcgccccagtttgctttcctcctctcaactcgagcaggagggctgggcatcaat
cttgcgtctgccgacaccgttatcatctatgactctgactggaacccccacaatgacatc
caggcgttcagcagagctcaccgtattggccagaacaggaaggtgatgatttatcgcttt
gtaaccaaagcatccgtggaggagagaatcacacaggttgcaaagaaaaaaatgatgctc
acccacttggtggtgcgacccggcctgggctccaagaccggttccatgtccaagcaggag
ctcgacgatatcctcaaatttggaaccgaagagctgtttaaggatgaggctggagaagga
gacaacaaggaagacgacagcagcgtgatccactacgacgaccaagccattgaccgtttg
ctcgaccgcaaccaggacgccacggacgacaccgagatccagagcatgaacgaatacctc
agctccttcaaagttgcccagtacgtggtcaaagacgaggacgatgaggaggaggaagtg
gagcgggaggtgatcaagcaggaagaaagcgtggaccccgactactgggagaagctgctt
cgtcatcactatgagcagcagcaagaggatctggcccgcaatctgggcaaaggcaaaaga
actcgaaagccggttaactacaatgacggttcgcaggaggaccgaggtataagacaggat
tggcaagaggaccaatccgacaaccagtccgattactcggtggcgtcggaggagggcgac
gaggactttgacgagcgttctgaagcaaacgcccgcagaccgaaccgcaaagggttaaga
aatgacagggacaagcctctgcctccgcttctggcccgagtgggaggaaacattgaggtt
ctgggcttcaacgcacggcagaggaaggctttcctgaatgtggtgatgcgttacgggatg
cctccacaggatgcgttcaacaaccagtggcttgtcagggaccttcgagggaagtctgag
aaggaattcaaggcttacgtgtctctgttcatgaggcacctgtgtgagccgggagctgac
ggagcggagacttttgcagacggcgtcccacgagagggtctatccaggcagcacgtgctc
actcgcatcggtgtcatgtcgctcatcaggaaaaaggtgcaagagtttgagcatgtgaat
ggtcagtggtccatgccctggatggcggaactggaggaaaacaagagggcggcggctttg
gctgcgggtgaggatcccaagaccccttcaagcgggacgcccgcggatacgcaaccgaac
actcctgtgccagaggatctctcaagatcagaggacaaagaggacatcaagaaggatgcg
gaggacaccaaagtagcccgaaagccagacgatccagagattatcgaaatcccagatgag
tccgacaagtcgccagcctctgaaagcaaagacgatgaccttgcggggaaggaggagaaa
gagaaggagacgcgaggtgccgatgaagggaataacggcaccgacttgagcaaggaccga
gaggagaagggcgacaaagccgttcctgctgatgtcaaaggtgaaggaactgaggacaaa
acggatgcggaggatcgatctaaaggtgaagatgctaaagatgaaaagatggacacagac
aaagatcaacaagaggataaagacggcgtgaaatcggaggaatcgagccgacttcagaat
ggagagaacaccagagaaggcgctctgtccgtgttgaatgtgagtgaagagaagaggaaa
gcgagcaagcagaggttcatgttcaacatcgcggacggaggcttcacagagcttcactcc
ctctggcagaatgaggagagggcagccaccgtcacgaagaagacctttgagatctggcac
cgtcgccatgactactggctcctggctgggatcatccaacacggctacgcccgatggcag
gacgtgcagaacgatgtcaggttcgccattctcaacgagcccttcaagggggaaatgagc
agggggaacttcctggagatcaagaacaagttcctggcgcgcaggttcaagttactggag
caagcgttggtgattgaggagcagctacgccgggcggcctacctcaacatgacggaggat
ccggcccacccctccatggcgctcaacacgcgcttcagcgaggtggagtgtctggccgag
tcccaccagcacctcagcaaggagtccatgtcaggaaacaagccagccaatgcagttctg
cataaagctggaggagctgctgagcgacatgaaggcggacgtcacgcgccttccggccac
catcgccaggataccgcccgtggccgtgcggctgcaaatgtccgagaggaacatcctcag
caggctggccagccgcgggcccgaggtgaccgcccagaacccgtcgcagagcgtgcagca
gatgcaggtttcgcgctgaggcgggaacttttcaccgcctga
DBGET
integrated database retrieval system
