Hippocampus comes (tiger tail seahorse): 109515476
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Entry
109515476 CDS
T04969
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109515476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109515476
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109515476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
ATG17_like
GAS
Motif
Other DBs
NCBI-GeneID:
109515476
NCBI-ProteinID:
XP_019724831
LinkDB
All DBs
Position
Unknown
AA seq
2510 aa
AA seq
DB search
MAAALLQVLERAELNKLTKGVQNKLEKFVTELQNANEALRTQQERFKADSEQQYFDIDKK
LGESQEQILSATRDLQTLKEENKKLNEELSALKGIDGDTPEDETQQQQYKSKYEIEAEKK
ELARLLEKRTQEVENLTEDVKRLNEKLMETNKVKLELQLKLDEIQSSEASVQHREKRMEQ
EKELLDQKIEWLSAELKTKTEELLSSNRETGKEILELRGSLKSETEQVTRLESQLGSLKQ
SNENQHERAEDLNNKLKQAKDELSAMEEKYRNELNAHIKLSSLYKGVAAEMETKNQELNR
AVEELGKLVKNTAEANKMLEKKVSDADEQKAHLEAELQEKIKKMEKELENSVTKASGKYC
CAPSLTEEQLESMCPSAAAIAAIVKPGMKFFDLYNAYSECEIRLQLEKQETRRVNKVLDE
VIQEVESKAPVLKRQREEYETMQNSMASLWNKLEQARTEIYRLQKEKDEAKQQCDNLEKD
KLRTERLLDDTSTQVCALLVELEEARGHQVTKDDGTSSNISGQVTRQQQISFRSVEELQA
QNRSLLERLRKLEEESTRQQAHATSTRISELEAVVDKLQKEAEQLRDQRNQQKQLADSNA
RQRDMYKALLTQSTGGLNLPSQDFSPPAPTRPSAPVTRSTPQRAAAGADSVQTAQAKAAL
KQLHDAFTLYKKEKAENDRMLNDSHDRLERQLTEVRSSNARLTSQVEFSNKRYEMLQETV
TAFRRETSALQDRNQKMSETVLRYEHIIHTMTQDLRQVNEKLALEEVRVENLTKERDILK
QAESRLNREKEVMLAEQRNQNLLLTNLKTIQLTMEHTDTDIRHRLNSKIENLETELASMK
TRLEQEVAQRHTLGRNMDAQLVEAKKQLQTQNTLQQKTRELLKNSEQQVAALKAQLASVS
SEGTSTPVTRAATLRTPVRVRSPVQTTQQPGPSELAEVKSNLNAAEEQNSKLTEQLTNAN
ATVEQYRAVVLTLEDSLKNEKELRFPVETRLKESEDIQKQLENRILEVEKKNQQAQEERR
KSLDTLEKQVSDLQRSLKASQAEQQDALERAARAVALEQNAIQESLLQTKQAGEAQAKYE
RELMLHAADVEVLKELKKALQQEAERKREIEEQLNKSNTLLEEKTTGWTTLEKQLKDELV
RQSLRGEELGRQNALLHQQMDEMAARSHRQQPQQQQLDLSFNEEGKTLEQIQEILRFVRK
EKEIAVAQGEASEGEALRYKQRMEHQNRELKELQEALNTEREKLQATTKTLAQKEAQLNN
MGDVGTLQETNKLLKMDREQLEQELQQAQAKVKKLESNISPLNESLYHLSDRNGSLQADK
RLLEEDIKHLKAKVQQLVSQQKDGDVQEKQKVTAEREAQQRRISQLVEETAKLKTELARS
STSTNSAQSQAKSLRESVTRLTAERDALKKEVGTKNNDILEKNKTITQVKKIGRRYKTQY
EELKAQHDKLVEETSAKTQGETSPVQQQELTKSQEELNKVKEELAALKESMQEAKNSEQE
LQNTQKENQQTKEKLQEIQNQLTLNQNQLTQTQAQLSQTQTQLQQSQKELQQAKTLTQQT
QNQLKSAQCQAQARQSQIQRIQKELLQTKDSLQQNLTSHKKLQETHQQEINNLKSSLNQA
ESQVSQLQGQVDTLHKMLSAEQAETKRLQEQLQEVKQANEALKAAQTIPDQNLSIHASDD
HPATDANQPFQVELERLRQELSVSKNKEEKLRQQMADKEEKTKKAFVGAKTKINQLNSAK
ENLSKEVEDLKQCKEELEVRMNAMKSQYEGRLLRLDRELRETQTHSEPREESQDQTGSKV
GDQNRSGDQRQLSLKSPAQDRSSSSLSEPPTANIRPTPSAPSPSNKPSPSPGSKSTPRAS
IRPMVTPATVPMPTPTATVMPTTQTESQEVLMTTGAAAHTVISSLSAPASITQPSGAQAT
AFVQPTQQQQQQQQAASQDVGSSVDTERPSTSSAVVGAPSSKRSREDDLEEDDIKPESSQ
APSTAKKLRLRQTLGLQMEGDEEIEDLRDEGERQDSPDNSQELPEDFPVIPEDDDIEAEG
MSQSVPSDRTSPQESGLTREVIVIDTDSESRESRGEKPETTGACEEEEEEEEEGEEEEGE
EEEEEEEEEYKAEGAEEEEDDDDEEDGDDASSAAMKREEESSEEDGNAEEDGQQPSVPTG
AEEDHSQGAPEPSRGSDAGSTGESEAQKEAVHVPPTSSPSTPSPSTSSLTLRLPQPRRPP
HSLPPRLYIQPPASELGPPHTQRQSSQLRRPSVGRGPQLTPGIGSMQHFFDDDDRMVPST
PTLVVPHRTDGFAEAIHSPQVAGLSTRFRFGPPEDLLPQTSASHSDLGQLASQGGLGMYE
SPLFLAAHDEDGGGRSVPTTPLQVAAPVTVFTESLPSDSGDNMASQSVPMVTASTGMSTP
GDDGDEVFMEQEEGPPAEASLDSRADMETAGQQSEDASLPSTSQDADSSTIFNTLCNSSG
VTQRRVVTTQPVMSTPLSRGSRGRGEGRVLISRRGTLGRSRGGVGRGSSI
NT seq
7533 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccctgttgcaagttctggagcgagcggagttgaataagctcactaaaggt
gtccaaaataagctggagaagtttgtaacggagcttcaaaatgctaacgaggctctcagg
acccaacaggagagattcaaagcggacagtgaacagcagtactttgacatcgataagaaa
cttggggagagtcaagaacagatcttgtctgccacgcgagacctgcagacactcaaggag
gaaaataaaaaactaaatgaagagttgagtgctctgaagggaattgacggagacactcct
gaggatgaaactcagcagcagcagtacaagtcaaagtatgagattgaggcggaaaaaaag
gaactggcgcggcttctggagaagagaacgcaagaggtggagaacctgactgaagatgta
aagcgcctgaatgagaaactgatggagaccaacaaagtcaagttggagttgcagttgaaa
ctggatgagatccaatcctctgaggcctctgtgcagcaccgggagaagcgcatggagcag
gaaaaagaactgctggatcagaaaattgagtggttatctgcggaactgaagaccaaaact
gaggaactgctgagcagtaacagagagacgggcaaagagattctagagctgcggggtagc
ctgaaaagcgagactgagcaggtgaccagattggaaagtcaactcggttctctgaagcag
tccaatgaaaaccagcatgaacgagccgaagacctcaataacaaactgaaacaggctaag
gacgaactgagtgccatggaggagaaataccggaatgagctcaatgcccatatcaagttg
tcttctctctacaagggtgtagcagcagagatggaaactaagaatcaagaactgaacaga
gcagtagaagaactcggcaaattggttaaaaacactgctgaagctaacaaaatgctggaa
aagaaggtgtctgatgcggatgagcaaaaggcccatttggaggcggagcttcaagagaag
atcaagaaaatggagaaagagttggaaaattctgtgacgaaggcctccggcaaatactgt
tgtgcgccctcactgactgaggagcagctggagtccatgtgtccatctgcagccgccatt
gctgccatcgtcaagcctggaatgaagttctttgacctgtataatgcatattccgagtgt
gaaattcggctgcaactggagaagcaggagaccagaagggtgaacaaagtgttggatgag
gtcatccaggaggtggaatccaaagcgcctgtcctcaaacgtcagcgggaggagtacgaa
accatgcagaattcaatggcctccctgtggaataaactggaacaggctcgaacggagatc
taccgtttacagaaagagaaggacgaggccaagcaacagtgtgacaatttggagaaggac
aagctgaggacagaaagactgctggatgatacatccacccaagtatgtgcactgctagtt
gaacttgaagaagcccgaggtcatcaggtgaccaaagacgatggcacttcctcgaatatt
tccggccaggtcaccaggcagcaacagatttccttccgcagcgtggaggagctccaggcg
caaaacagaagcctgctggaaaggctgaggaagctcgaggaagagagcacaaggcagcaa
gcccatgcaacatctacacgtatctcagagttggaggccgttgtggataaacttcagaag
gaggcagagcagctgagagaccagcggaaccaacagaagcaacttgcagactccaatgct
aggcagagagacatgtacaaagccctgctaacgcagagcaccggcggcttgaacctgccc
tctcaagatttttcgccccctgcacccactcggccgtcagccccagtaactcggtcaacg
cctcagagagccgccgccggtgctgactctgtacaaaccgcccaggctaaagctgcatta
aagcagctacatgacgccttcaccttgtataagaaagagaaggcagagaacgacagaatg
ttgaatgactctcatgacagactggagcgtcaactgacagaggttcgctccagtaatgcc
agattgacttctcaagtggagttcagcaacaagaggtatgagatgctccaagagaccgtc
acagcgtttcgtagagagacctcagctctccaggacaggaaccaaaaaatgtcagagaca
gtcctacgatatgagcacattattcacactatgacccaggacctgcggcaagttaatgaa
aaactggctcttgaggaggtgcgtgtagagaacttgactaaagagagagacatcttaaaa
caagcagagagtcgactcaatcgagagaaagaggtcatgctggcagagcaacgtaaccaa
aacctactactcaccaacctcaagaccatacagttaacaatggaacacacagacacagat
atccgtcaccgactgaacagtaagattgagaatctggaaacagaactggcctcgatgaag
actcggctggagcaggaagtagctcagagacatacccttggacgcaatatggatgctcag
ttggtagaagctaaaaaacaacttcagactcaaaacaccctgcagcagaagacaagagag
ttgttgaagaattctgagcagcaggtggcggcgctgaaagctcaactggcttctgtctca
tctgagggtacgagcactccagtaaccagagcggcaactcttcgaacacccgtcagagtg
cgctctccggttcaaaccactcagcagcccggcccgtccgagctggcggaagtcaaaagt
aatctaaatgctgcagaggaacagaacagcaaactgaccgagcagctaacaaatgctaat
gccactgttgagcagtacagggctgtggtcctgactttggaagacagtctgaagaatgag
aaagagctacgttttcctgttgagacgagactcaaggaatcagaagacatccagaagcag
ctggaaaacagaattttagaggtggagaagaaaaatcagcaagcgcaagaagagaggagg
aagtctttggacacacttgagaaacaggtgagtgacctgcagcgcagtttaaaggccagc
caagcagagcagcaggatgccctggagagagccgctcgagctgtcgctctggagcagaat
gccatacaggagagcctgcttcagaccaagcaagctggtgaggctcaggctaaatacgag
cgagagctgatgcttcatgccgcagacgtggaagtcctcaaggagttaaagaaagcattg
caacaagaggcggaacggaagagagagattgaagagcaactgaacaagtccaacacactc
ttagaggaaaaaacgacaggctggacaactttggagaagcagctgaaggatgaattggtt
cgtcagagtttgcgcggtgaagagctgggaaggcagaacgctctcctgcaccaacaaatg
gatgaaatggccgcaaggagtcatcgacagcaaccgcagcagcagcagcttgacttatca
ttcaatgaggaagggaagacacttgaacagatccaagaaatactcaggtttgtacgaaaa
gagaaggagattgccgtggcccaaggtgaggcctctgaaggcgaagctctgcgctacaaa
cagcgaatggaacaccaaaaccgggaacttaaggagcttcaggaagctctgaacactgag
agagagaagctgcaggccacgacaaagaccttggctcagaaagaggctcagctgaacaac
atgggcgatgtcggcactctccaagagaccaacaagttgctgaaaatggaccgagagcaa
ttggaacaggagctacagcaagcacaggcaaaagtgaagaagctggagtccaacattagc
cccctcaatgagtcattgtatcatctctctgacagaaacggttccctgcaggctgacaaa
aggttgttagaggaagacataaaacacttgaaagccaaagtacagcaacttgttagccag
cagaaagatggcgacgttcaggaaaaacaaaaagtcaccgctgagagagaagcacagcag
aggcgtatctcccagctggtagaggagacagccaagctgaagactgagctggccagatcc
agcaccagcacgaactcggcgcagtctcaagcgaaaagcctgagagagtctgtgacccgc
ctaacagcagagagggacgcactgaagaaagaagtgggaacaaaaaacaatgacattctt
gagaaaaacaagaccatcacgcaggtgaaaaagatcgggcgccgctacaagacccagtat
gaagagctcaaagcccagcacgataagctggtcgaggagacttcggctaaaacgcaaggc
gaaacaagtccggtgcagcagcaggagctcacgaaaagtcaagaggaactcaacaaggtc
aaagaggagctggccgcattgaaagagtccatgcaggaagccaaaaactccgagcaggag
cttcagaatacccaaaaggaaaaccaacagaccaaggaaaagttacaggagatccaaaac
cagttgacgctgaaccagaatcagctaacacagactcaagcccagttgtctcaaacccag
acacagttgcagcagagtcagaaagagcttcaacaagcaaagaccctcacgcagcagaca
cagaaccaactgaaatcggctcaatgtcaggctcaggcccgtcaaagccagattcagcgg
atccagaaggagctccttcagactaaagactctctgcagcaaaaccttaccagtcataaa
aaactccaggagacccaccagcaggagataaacaatcttaaaagctctttgaaccaagca
gagagtcaggtgtctcagctgcaaggccaggtggacactctgcataagatgctgtctgct
gaacaagcagaaaccaagcgccttcaagaacagctacaggaagtcaagcaagccaatgaa
gctctcaaagcggcgcagacgattccggaccagaacctgtcgatccacgccagtgatgat
catcccgcaacggacgcaaatcagccattccaagtggagcttgaacgactccgacaggag
ctgtctgtaagcaagaacaaggaagagaagctcagacagcagatggctgacaaagaggag
aagactaagaaggcctttgtcggagccaagacgaaaatcaaccagctgaattctgcaaaa
gagaatctgagcaaagaggttgaagacctcaagcagtgtaaggaggaactggaggtgagg
atgaacgccatgaagtcacagtatgaaggaagacttctgcggcttgaccgagaactgcgg
gagactcaaactcactccgagcccagagaggaatctcaggaccagactgggtcgaaggtg
ggtgatcagaacagatctggagaccagagacagctctctttgaagagtccagcccaggac
cggagcagctcgagcctgtccgaaccgccgactgccaatatccgccccaccccaagtgct
ccatctccgagcaacaaaccgagcccttcacctggcagcaagtcaacgccccgtgccagt
atcagacctatggttaccccagcaaccgtccccatgccaacgcccaccgccactgttatg
ccaaccacacagaccgagagccaagaggtgttgatgactacgggagccgctgcccacacg
gtcatctccagtcttagcgcacccgcatccataacgcaaccgagcggcgcgcaggccacg
gcatttgtccagcccactcagcagcagcagcagcagcagcaagcggcgtctcaggatgta
ggcagcagcgtagatacagaacggccgtcgacatcctctgccgtcgtcggagcaccgagt
tcaaagcgaagtagagaggacgatctcgaggaagacgacatcaaaccagagagttctcag
gccccttcgaccgccaaaaagctccgactgagacaaactcttggcctgcagatggaaggt
gatgaggagatcgaagatctacgggatgaaggtgaaagacaagattcacccgacaacagt
caggagcttccagaagattttcctgtcatccccgaagatgacgacatagaggcggaaggc
atgtcccagtcggtcccttcagatcggacgtcccctcaggagtcaggtctgactcgtgaa
gtgattgttatcgacacagacagcgaaagccgtgagagcagaggagagaaaccggagacc
acgggtgcgtgtgaggaagaggaggaggaggaggaggagggtgaagaagaagaaggggag
gaggaagaggaggaggaggaagaggagtataaggcggagggggcagaggaggaagaagat
gatgatgacgaggaggatggcgatgatgcaagtagcgctgctatgaagagagaagaggaa
agcagcgaggaagatgggaatgccgaagaagacggacagcagccctccgttcccaccggc
gctgaggaggatcattcccagggtgcccctgagccgtcccgcggcagtgacgccggcagc
accggcgagtcggaagcccagaaggaggccgtgcacgtccccccgacgtcctccccgtcc
acgccctcaccttccacttcttcccttacgctccgcctaccccaaccccgaaggcccccg
cactccctccccccacgactgtacatccaacccccagcttcagagctcgggcccccccat
acgcagagacagtcctcccaactccgacgaccatcagtaggtcgaggaccacagctgacg
ccagggataggcagcatgcaacatttctttgacgatgatgacaggatggttccaagtact
ccgactctggtcgtgccccaccgtactgacggctttgctgaagctatccattctcctcag
gttgcaggtctgtccaccaggtttagatttggacctcctgaagacctgctccctcagact
tcggcatcgcattcggacctggggcagctggcctctcaaggaggtctgggcatgtacgag
tccccgctgttcctggctgctcatgatgaggacggaggaggaagaagtgtccccacgacc
cctttgcaggtggctgcacctgtgacggtctttacggagtctctgccctcagacagtggc
gacaacatggcgtcccagtctgttcccatggtaactgcctcgactgggatgtccacaccg
ggcgacgatggagacgaggtgttcatggaacaagaagaaggtccacccgccgaggcttct
ttggacagccgcgccgacatggagactgcgggacagcaaagtgaagatgcgtcacttcca
tccaccagtcaagacgccgattcctccacaattttcaacacgttgtgcaacagcagcggc
gtcactcagaggcgcgtggtgaccactcaacctgtgatgagcaccccgctgagcagagga
agcagaggaaggggcgaaggacgcgtgctgatcagccgccgaggcacgcttggtcgatca
agaggaggagtgggcagagggagctccatctaa
DBGET
integrated database retrieval system
