Hippocampus comes (tiger tail seahorse): 109519858
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Entry
109519858 CDS
T04969
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hcq00536
]
109519858 (slit2)
Glycosaminoglycan binding proteins [BR:
hcq00536
]
Heparan sulfate / Heparin
Axon guidance molecules
109519858 (slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
EGF
LRR_5
LRRNT
Laminin_G_2
Laminin_G_1
LRR_9
LRRCT
hEGF
LRR_1
DL-JAG_EGF-like
JAG1-like_EGF2
EGF_3
Laminin_G_3
cEGF
Plasmod_Pvs28
EGF_2
GHMP_kinases_N
Motif
Other DBs
NCBI-GeneID:
109519858
NCBI-ProteinID:
XP_019732232
LinkDB
All DBs
Position
Unknown
AA seq
1567 aa
AA seq
DB search
MLGALNPAGLGRAPYSALGLLVAILAVALSGRGAAGQPCPTQCSCTGTTVDCHGQGLRGV
PRNIPRNTERLDLNANNLTKIAKADFAGLRNLRVLQLMENKITTIERGAFQDLKELERLR
LNRNNLAVFPELLFLGTTKLHRLDLSENQIQGVPRKAFRGAVEIKNLQLDYNHISCIEDG
AFRALRDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRPR
LGLYTQCMAPPHLRGHNVAEVQKKEFVCTGYQSSSSSCSVLQCPESCTCSNNIVDCRGKS
LTEIPTNLPETITEIRLEQNAIKVIPAGAFSSYKKLRRIDLSNNQISELAPDAFQGLRSL
NSLVLYGNKITEISKGLFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLYDNKLQT
IAKGTFASLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIGQ
IKSKKFRCSGTEDYRSKLGGDCFDDLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTAEL
RLNNNEFTVLEATGIFKKLPHLRKINLSNNRITDIEEGTFEGASGVNELILTSNRLENVH
HRMLKGLGGLRTLMLRSNRISCVSNSSFVGLSSVRLLSLYDNQITSMNPGAFDTLHSLST
LNLLANPFNCNCHLAWLGDWLRRKRIVTGNPRCQSPYFLKEIPIQDVAVQDFACEDGNDD
NSCSPVLRCPAECSCLDTVVRCSNKGLTTLPKGLPKETTELYLDGNHFTQVPVELSDYKH
LTLIDLSNNQISTLSNHSLSNMSELLTLILSYNRLRCIPVRAFDGLKSLRLLSLHGNDIS
LIPEGAFKDLSSLPHLALGANPLHCDCHMQWLSDWVKSGYKEPGIARCAGPGDMTDKLLL
TTPSKKFTCTGPVDISIQAKCEPCLSSPCKNDGTCFNDPVHYYRCTCPYGFKGQNCEEPI
HACIGNPCQSGGTCHLKEGEGSSFWCVCPEGFEGDSCEFNIDDCEDNDCENNSTCVDGIN
NYTCMCSPEYTAATNEVERGELCEEKLDFCAPELNPCQHNSKCILTPQGYKCECNPGYIG
EHCELDYNDCDENKCQNGGQCIDAINGYTCVCPEGYSGLFCDLSPPMVLPRTSPCDNHDC
LNGAQCVVMGTDPRCQCLQGYEGQRCETLVSVNFVDRKSYLQLPSNLISPQTNISLQIAT
DEDSGVLLYKGDNDHIAMELYRGRLRVSYDTGSYPPSAIYSVETVNDGSFHAVELVASDQ
TLSLSIDGGAPKSINSISKQSTLNIDSPLYLGGMPERASAFGGLSALQHSSGGRNGTSFH
GCLRNLYINGKLQDLGAGLGSGAADAGAARSTTRQWLGQGVEPGCQPCQRGACVQGDCHP
TGHRGFTCTCHPGWTGPVCDQQVNNPCDGNKCIHGTCLAINSYSYSCRCQPGFSGVLCDE
QDQEATNPCGLSRCKHGKCRVSGLGKAYCECNSGYTGEACDKEVACRGERVRDVYQRQQG
YAACQTQEKVSRLECRGSCLGGAEGQGTCCTPLRSKRRKYTFQCTDGSSFVQEVEKIVKC
GCTKCFT
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atgcttggagccctgaaccccgcgggcctcgggcgagctccgtattccgcgctggggctg
ctggtggccatcctggccgtcgctctgtcgggccggggcgcagccggacaaccgtgcccg
actcagtgctcctgcaccgggaccacagtggactgtcacggccaagggctccgcggcgta
cccaggaatataccccgcaacaccgagagactggatctgaacgcaaacaacctgacgaaa
atcgccaaggccgatttcgccggactgagaaatctgcgcgtgctgcagcttatggagaac
aaaatcaccacaattgagcgaggagctttccaggacctgaaggagctggagagactgcgc
ctgaatcggaataatctggctgtttttcccgagctgctctttctgggcacgacgaaactt
cacagacttgatctcagcgagaaccagattcaaggggttcccaggaaagccttcagggga
gctgtggaaataaagaatctccagctggactacaaccacatcagctgcatcgaagacgga
gccttcagagcgttgcgcgacctggaagtactcaccctcaacaacaacaacatcagccga
ctgtcagtggccagtttcaaccacatgcccaagctgaggacctttcgcctgcactccaac
aacctgcagtgtgactgccacgtggcctggctgtcggagtggctgcggcagcgcccccgt
ttgggactttacacgcagtgcatggccccaccgcatttgaggggccacaatgttgcagag
gtgcagaagaaagagtttgtctgcacaggttaccagtcgtcgtcttcgtcctgcagtgtg
ttacagtgtcccgagtcgtgcacctgcagcaacaacattgtggactgcagagggaagagt
ctgacagaaatacctaccaacctccctgaaaccattactgagatacgattggagcaaaac
gccatcaaggtgatcccagccggggccttttcttcttataagaaactgcgaagaatcgac
ctgagtaacaatcagatttcagagttggctcctgatgctttccaaggtctgcgatccctc
aactctctcgttctgtacggcaataaaataacagagatctccaaagggctgtttgaaggg
ctgttttcgctgcagctattgttactgaatgcgaataagatagcgtgtctccgtgtggat
gcctttcaggacctccacaatctcaaccttctgtcactatatgacaacaagctccagacc
atcgccaagggaacctttgcatcactgagggccatacagacgctacatttagctcaaaac
ccattcatctgtgactgccacctgaagtggctggccgactacttgcaggacaatcccatc
gagacgagcggcgcccgctgcaccagccctcggcggctggccaataaacgaattggacaa
atcaagagcaagaaattccgctgctcaggtacggaggattaccgcagcaagctgggaggg
gactgcttcgacgacctggcctgtcccgagaagtgccgctgcgagggcaccaccgtggac
tgctccaaccaaaagctcaccaaaataccagaccacatccctcaatacactgccgaactg
cgtctgaacaacaatgaatttactgtcctcgaggcgacagggatcttcaaaaagttgccc
catctgaggaagattaatctgagtaataaccgcatcactgacatcgaggagggcactttc
gaaggagcttcaggggtcaatgagctcattttgacctccaatagattggaaaatgtacat
caccgcatgctgaaaggactcggtggcctgcgcacactcatgctgcgcagtaatcgcatc
agctgcgtgagcaacagtagctttgtgggtttgagctctgtgcgtctgctgtcgctctac
gacaaccagatcacctcgatgaaccccggcgccttcgacacactgcactctctctctact
ctcaaccttctggccaatccgttcaactgtaactgtcatctggcctggcttggcgattgg
ctgaggaggaaacgcatcgtcacgggcaaccctcgctgccagagtccttacttcctgaaa
gagatccccattcaggatgtcgctgttcaagactttgcttgtgaagacggtaatgatgac
aacagctgctctccggttctgaggtgcccggcggagtgctcgtgcctggacacggtggtg
cgctgcagcaacaaaggtctcaccactctgcccaaaggcctgcctaaagaaaccactgag
ctgtatctggatgggaaccacttcactcaggttcctgtggagctctccgattacaaacac
ttgacactcattgatttgagtaacaaccagatcagcacgttgtccaaccacagcctcagt
aacatgtccgagctgcttaccctaatcctgagctataaccgtctgcggtgcataccagtg
agggccttcgacggactcaagtctctgcgcttgctgtccctccatggaaacgatatttcg
ctcataccagaaggagccttcaaagacctgtcatcacttccacacttggctctgggcgca
aaccctctgcactgtgactgccacatgcagtggttgtccgactgggtgaagagcggctac
aaggagcccggcattgcccgctgtgcagggcccggcgacatgaccgacaaactgctgctc
accacgccatccaagaaattcacctgcacaggtccagttgatatcagcatccaggctaaa
tgtgagccctgcctgtccagcccgtgcaagaacgacggcacatgcttcaatgacccggtg
cactactaccgctgcacctgtccctatggatttaagggccagaactgtgaggagcccatc
catgcctgcatcggtaatccctgtcagagtggaggaacttgtcatctaaaggaaggcgaa
gggagtagtttctggtgtgtgtgccccgagggctttgagggcgactcttgtgagtttaac
atcgatgactgtgaggacaacgactgtgagaacaactcgacatgcgtcgacggaatcaac
aactacacatgcatgtgctcaccagaatacacagctgccaccaatgaggtggagagagga
gagctatgtgaagagaaactggatttctgtgctcccgaactgaacccatgtcagcacaat
tcaaagtgcatactgacccctcagggatacaagtgtgagtgcaacccaggttacattgga
gagcactgcgagctggactataacgactgtgatgaaaataagtgtcagaatggcggtcag
tgcatcgatgccatcaacggatacacctgtgtctgtccggagggctacagtggtttattc
tgcgacttgtccccaccaatggtccttcctcgcaccagcccctgcgacaaccacgactgc
ctcaacggggcgcagtgcgtcgtcatgggaaccgacccccgctgccaatgtctccaaggc
tacgagggacagcgctgcgagacgcttgtcagtgtcaactttgtggaccgcaagtcttac
ctgcagcttccctccaatctgatctcaccgcagaccaacattagcctgcagattgctacg
gatgaggatagcggagtgttattatataagggggataatgatcacatagcaatggagctt
tataggggacgccttcgggtcagctatgatactggctcttaccctccctctgccatatac
agtgtggagacagtgaatgatggcagtttccacgcggtggagttggtagcatcagaccaa
acgttgtccctgtccatcgatgggggggcacctaaatccatcaactccatcagcaaacag
tccacactcaacatcgactccccgctatatctgggaggtatgccagagcgtgcctcagca
tttggaggtctgtcagccctgcagcacagctcaggtggacgaaatggcaccagcttccac
ggctgtctccggaacctctacatcaacgggaaactccaggacctcggagcggggctgggg
tctggagctgcggatgccggggctgcacggagcaccactcgacagtggctcggtcaaggg
gtggagcctggttgccagccctgccagagaggggcctgcgtgcagggggactgtcacccg
acgggacatcgcggatttacctgcacctgccacccgggctggacgggaccagtttgcgac
cagcaagtcaacaacccttgtgatggcaacaagtgtattcacggcacctgcctggccatc
aactcctactcttactcctgccgctgccagcccgggttcagcggcgttctctgtgacgag
caggaccaggaagcaaccaatccctgcggcctgtcgcgctgtaaacacggcaaatgcaga
gtgtcaggactgggcaaagcatactgcgagtgtaacagcggatacaccggagaggcatgc
gataaagaggtggcctgcagaggggaacgggtccgagatgtctaccagagacagcaaggc
tacgcggcgtgccaaacccaggagaaggtctcccgtctagagtgcaggggcagctgcctg
gggggagcagaaggacaagggacctgctgcaccccgctccgcagcaaacgcaggaaatac
accttccagtgcactgacggttcctcttttgttcaggaagtggagaaaattgtcaaatgc
ggctgtacaaagtgtttcacataa
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integrated database retrieval system
