Hippocampus comes (tiger tail seahorse): 109521302
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Entry
109521302 CDS
T04969
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109521302 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hcq01009
]
109521302 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109521302 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
hcq03029
]
109521302 (rb1cc1)
Protein phosphatases and associated proteins [BR:
hcq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109521302 (rb1cc1)
Membrane trafficking [BR:
hcq04131
]
Autophagy
Autophagosome formation proteins
ULK complex
109521302 (rb1cc1)
Mitochondrial biogenesis [BR:
hcq03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109521302 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
ubiquitin
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
109521302
NCBI-ProteinID:
XP_019734658
UniProt:
A0A3Q3DMH4
LinkDB
All DBs
Position
Unknown
AA seq
1586 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIALQHQVLVVNGGECMDAERRVC
SYSAGTETNPIFLFNKEMILSDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVANKLSSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLVKFDTAYSTYQH
DLEEIKFKLTKLGTAVSVMARIPLLECLTRQSHREHMKKSASTPEKDSDETEEEKSSDSV
LCAPDAQRGHKVPGSTEMAKSEGTGERDMSQMMDNVELRAALQDEHIPKPGNLPQFNVTL
LDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLADCRDTIAKLDNQNMKAIKGLEDR
LYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLNNHR
KLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALFRLLTELLERVRVVEA
LSTVPQMYCLAVVEVVRRRMFMRHYREWAYALVKDGKQLYEAEKFKRENFGKLFRKSFLR
NRLFRGLDAWPPTSFCTSKPRRFDDELPDISVNDLEYLKSCCPVEVQPFLMVPTMCDFDP
LNQHVQKLTRLVQATQSLDDMSETITNLLSEQRVSFSQSMHRSTALTPQSAESPPGLAAA
SKAPASLSLQGASSHPLNIPAPLEDLSPDSIDAQTFDFETISHPNMEGVLQPGSLDLDSL
AESPESDFMSAVNEFVIEENLTSPNPISDPTSPEMMVESLYSSVINAIDNKRMQDTTILE
RENSRIAVLHQAIYNYRLAAEESHSNLRCVKDDLCRLRSQVSKEQNDFGFALRSVSSEVR
DMVDNICRALELELKEQHQSEIVTLRQAYEKQVRSLTEDNQVNQNIVRDVQRAMLELEGL
MERKEKELTQLEGDKALWLETESNLKEKLKKSEQLVSVGETELQNVLASRDSLKSQLENL
HFEIERGQQKIRQELEAEAQAHLKELEDRLKVEHRAELGHLSKDHQKALEHIAAENMTKL
KDAIEHHNSAVQEKDLQIKELEARYAELSELRCKVEMELALKETEVEEARVLLEETKMQQ
AEAVSSQVAAETQVLTEELAKTKQELQVKNEEYEMDRAELKSLLKIEKDHCISELVDRHE
KEMALLRSEISSLQQQAQETDRSHAEQLKNLKQELDQQVSAANEKKELQFRNFQELELEL
KTLISNLQAENQLLCKRLEEEASDETLKVLQLKNEETEKRLSDRIRQLEDELQNRPSLSS
DAGLPLCAESRTDAPLSLDSALQERLQQERASLQTQLELLERKKNEEIQNLKTSLIAEQQ
TNFNTVLTRERLKKEQIISDLTEKLQNVTQQQEKDKALIETLSEDRASVMQEKKHMEEEL
NRLRSTALVSSAIFTTHASALEVAGACSSELLADTDRLASVATLRDDEHVDSAVEASMVT
VHENIVMSEEKQRILLLERTLHMKEEENKRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGD
LVLIILDERHDNYVLFTVGPTLYFLHSESLTALDLKPASGTSRRPWVLGKVMEKEYCQAK
KAQNRFKVPLGTKFYRVKAVPWNRRV
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggttaataatggcagcacactgacatttgacacagatctt
gctgtccaaactgtactggaacttaaacatgccatccaggcgaagtataagattgcactt
caacatcaagtccttgttgtcaatggaggtgaatgcatggatgctgagaggcgtgtctgc
agctacagtgcgggcactgaaacaaaccccatattccttttcaacaaggagatgatcttg
tccgaccgggatccaaccattcccaaaaccaccttctccattgagagcgagattcaggtg
aaggtggaagagtcgctactgatgccagccgtctttcacaccgttgcctctcgaacacaa
cttgctctggaaatgtttgaagttgccaacaagcttagttcgttctgtgaacgtttggtt
catgacgaacacctccagcaccaaggctgggccgccatcatggccaacctggatgactgc
acgctgtcctatcagaagctactagtaaaatttgacactgcatactcaacgtaccagcac
gatttggaggaaattaagtttaagctcacaaagctggggacagcagtctctgtgatggct
aggatacctctgctggaatgtttgacaagacaaagtcatcgagagcacatgaagaagtct
gcctccaccccagagaaagattccgatgagacggaagaagaaaaatccagtgactcagtg
ctatgtgccccagatgcacagcggggccacaaggtaccaggatctactgagatggccaag
agcgaaggtactggtgagcgagacatgagtcagatgatggacaacgtggagctcagagcc
gcgctgcaggatgaacacatccccaaacccggaaacctgccccaattcaatgtcacgctt
ttggactggatcaatgtgcaagatcggcctaatgacgtggagtctgttgttaggaaatgc
tttgattccatcaacaggcttgacccgcggatcatccaacctttcctcgcagactgtcgc
gacaccatcgccaagttggataatcaaaatatgaaagccatcaaggggctggaggaccgg
ttgtacgctctcgaccagatgattgcgagctgcaagaagctggtcaatgaacaaaaagaa
cttgctcagggatttttagccaatcagaagcgggctgaaaacctgaaggacacatctgtt
ctgccagacttgtgtctaagtcacaccaaccagctgatgatcatgttgaacaaccacagg
aagctgctggacatcaaaaagaagtgcaccactgccaaacaggagcttgcaaacaacctt
caagtccgactcaaatggtgctgctacgtgatgctccacgcagaccaggatggtgagaaa
cttcaagctttgttccgactcctcactgagctcctggagagggtgcgcgtggtcgaagcc
ctgagtacagtgccccagatgtactgcttggcggtggtggaagttgtccggaggagaatg
tttatgcgacactacagagagtgggcctacgcacttgttaaagatggcaagcaactgtac
gaagcagagaagttcaaaagggagaactttgggaaactcttcagaaagtccttcctcaga
aatcgtttgtttcgagggcttgacgcatggcctccgacctcattttgtacaagcaaacca
cgaagatttgacgatgaacttccagacatctccgtcaatgacttggagtacttgaaatcg
tgctgtcctgtggaggtgcagcctttcctcatggtcccgacgatgtgcgactttgatccc
ttgaatcagcacgtgcagaagctcactcgtctggttcaagctacacagagtttggacgat
atgtctgaaactattactaacctgctgagtgaacagagggtgtcttttagccagagcatg
cacaggtcaaccgcattaacgcctcagtccgcagaaagcccacctgggctggccgcggcc
tccaaagctcccgcctccctcagccttcaaggagccagctctcatccactcaacattccc
gcccctttagaggacctttctccagacagcatcgacgcacagacatttgacttcgaaacc
atcagccatcccaacatggaaggcgtcttgcaacccgggtccctcgacctggattcactg
gcagagagccccgagtccgactttatgtccgccgtcaacgaatttgtgattgaggagaac
ctgacttccccgaaccccatcagtgacccgaccagccccgaaatgatggtggagtctttg
tattcttctgtcatcaacgccattgacaacaagcgcatgcaggacaccacgatcctggag
agggagaactcgagaatcgctgtgctccaccaagctatttacaactatcgactagcggct
gaggagtcccactccaacctgagatgtgtgaaggacgacttgtgtcgcctgcgaagtcag
gtctcgaaagagcaaaacgactttggctttgccctgaggagtgtgagctcagaggttcgc
gacatggtggacaacatctgccgggcgcttgaactggagctgaaagagcagcatcagagc
gaaattgtgacccttcggcaagcatatgagaagcaggtccgctcgctcaccgaggacaac
caagtcaaccagaatatcgtgcgagatgtgcagcgtgccatgctggagctggagggactg
atggagcgcaaagaaaaagaactcacccagctggagggcgacaaggcgctttggctcgaa
acggagagcaacctgaaagagaaactcaagaagtctgagcagctggtgagcgttggagaa
acagagctccagaacgtcttggctagcagagactctctgaaaagtcagctggagaatctg
cattttgagatcgaacgtggccagcagaagattaggcaggaactggaggctgaggcgcag
gcgcatttgaaggagcttgaggaccgactgaaggtggaacatagagcagaactgggccac
ctctccaaagaccatcagaaggctttggaacacattgctgctgaaaacatgactaagcta
aaggatgcaatagaacaccataacagtgctgtacaagagaaggacctccaaataaaagag
cttgaggctcgctatgctgagctttcagaactgcgttgcaaggtggaaatggagttggcc
ctaaaagaaacagaagtagaggaggcaagggtcctcctagaggagaccaagatgcagcag
gccgaggcagtgagctcccaggtagcagccgagacgcaagtactcaccgaagagctcgca
aagaccaaacaagaacttcaggtgaaaaatgaggagtacgagatggaccgagccgagctg
aagagcctcttgaagattgagaaggaccactgcatctcggagctggtcgacagacatgag
aaggaaatggccctgttgcgaagcgaaatatcatccctgcagcagcaggcccaggagact
gacaggagccacgcagagcaactgaagaacctcaaacaagagttggaccagcaggtgtct
gctgccaatgaaaaaaaggagctgcagtttaggaatttccaggaactggagctcgagttg
aaaactctgatcagtaatttgcaggccgaaaaccagcttttatgtaaaagactagaggag
gaagcctcagacgaaacgttgaaagtgttgcagttgaaaaatgaggagacagaaaagaga
ctgtctgacaggatacgacaacttgaagatgagcttcaaaacaggccgtcgttatcgagt
gacgcagggctacccctttgcgccgagagccgcacagatgcacctctctctctggactca
gccctgcaggagcgcctgcagcaggagagggcctccctgcagacccagctggagctcctg
gagaggaagaaaaatgaggagatccagaacctcaagacctccctgatagcagaacaacag
acaaacttcaacactgttctgactcgtgagaggctgaagaaggagcagattatcagtgac
ctcacggagaagctgcagaatgtcacccaacagcaggaaaaggacaaagctctgatagag
acactctctgaggaccgagccagcgtgatgcaggagaagaagcacatggaagaggagctg
aaccgcttgcgcagcaccgccctggtctcctcggccatcttcaccacccacgcctccgcg
cttgaggtcgccggagcgtgttcatccgagctcctggccgacaccgacagactagcctct
gtggccaccttgagggacgacgagcatgtcgactcagcagtggaggccagcatggtaaca
gtccatgagaacatcgtcatgtcagaggaaaagcagaggatactcttacttgagcggact
ttgcacatgaaggaggaagagaacaagcgcctcagccaaagactgatgtctcaaagcatg
tcttctgtgtcctcgcggcattccgacaaaatcgccatcagagacttccaggtcggcgat
ttggttctaatcatcctggatgaaaggcacgacaactacgtgctgttcaccgtcggcccg
acactctacttcctgcactcggaatcacttactgcgctggacctcaaaccggcctcgggg
acatcaaggcggccgtgggtgctcggaaaggtgatggagaaggagtattgccaggctaaa
aaggcccagaacaggttcaaggttcctctcggaaccaaattctacagagtcaaagctgtt
ccgtggaacagaagagtataa
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integrated database retrieval system
