Hippocampus comes (tiger tail seahorse): 109525090
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Entry
109525090 CDS
T04969
Name
(RefSeq) versican core protein-like isoform X1
KO
K06794
neurocan core protein
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hcq00535
]
109525090
00536 Glycosaminoglycan binding proteins [BR:
hcq00536
]
109525090
04091 Lectins [BR:
hcq04091
]
109525090
Proteoglycans [BR:
hcq00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
109525090
Glycosaminoglycan binding proteins [BR:
hcq00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
109525090
Lectins [BR:
hcq04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
109525090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
V-set
Sushi
hEGF
EGF_CA
EGF_2
I-set
Motif
Other DBs
NCBI-GeneID:
109525090
NCBI-ProteinID:
XP_019740915
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MVLSASVLTILLPLLCASSARPQAAASHTGMDKMEDTWRVEGSLADTALLPCKLPMALSA
PADDEQLRVKWTRVEAGTEKVVLVAQGGAVKVGQDFMGRVSLPSDAPEMGEAALAVTGLR
ASDAGRYKCEVTRGMEDRRSSAILSVRGVVFHYRANTSRYSLDFSAAAEACLSVDAAIAT
PEQLTAAFHDGLDHCDAGWLADRSVRYPITQPRPGCEGDLKSRPGVRTYGIRLATEKYDV
FCYVEKLDGEVFYPPSISDKLTLQEAAAECRKHDAVLASPGQLFAAWAAGLNQCDYGWLS
DGSVRYPINAPWPQCGGGQLGVRTLYKYENQTGYPDPEDRHGAYCFKAKLPEATLTSPTS
TGVVPEPSATNAQHTSPASHPATSELQTNHVTPPASHDDDAITEKHLTQLESSFFTTASA
LHTTHGISGGGESGSSDEDSPSGADPEVEGVTPAPLFPDWSVTHKTALVFKEEASPGSFS
VDQSVAVPGEGGSTAKPPFHIIIVNVHDKNQSVDRILQLLNSPAGDAVVFPQITDLSQSI
GELVRGSGDADGAEAPLQAISFINGKHKVTLDARPPEEARGDQFETAAPIRVSEEEASVM
PFDYAALGEEPAEGPVTDGRHRDFLYYFSTPASPTRTPSPSASSRDTTREGSADDGLAGT
LDASPVSTNGMELGGSEDPSFAPGTKTLEANVPTKDDEGSTSGQDHAEMEEEPAALAPTP
PTPGGLSGEQLSGNGEAQPDPQLPQPANLRQEESTSSFRAQEKLSTVTPPSHTVSNHAVP
QWALSPDPAANPTLPEDFLDYDSKMTPQLVESRLPWPEETMDQPDLLEATFINVTDVQPC
SVNVCQNGGSCYRRGSERVCACAPGYTGGRCQTDVDECQSNPCLNGATCLDAVNGFSCLC
LPSYTGKLCEQDSASCGSGWHKFQSHCYKHFPQRRTWDAAERECRLHGAHLASILSFRNL
DLMCAGLVDDYQWIGLNDKMFEGDFRWTDHNPMQYEHWRPNQPDSFFETGEDCVVLIWHA
AGQWNDVPCNYHLGFTCKKGTVSCGPPPAVRDARVFGAPRSRYEVNALTRYHCKPGFIQK
RTPTIRCRPNGRWDVPKVICISPATYRTQLSVVTHRHVHHATSHHDDRRQNYNGQQSFLN
PLLDLER
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggttctgagcgcttcagtcctaaccatcctgctgcctctgctgtgcgcgtcttctgct
cggccgcaagcagcggcatcccacacgggaatggacaaaatggaggacacctggcgggtg
gaaggctcgttggcggacacggccctgctaccctgcaaattgcccatggcgctgtctgcg
cccgccgacgatgagcagctgagggtaaagtggactcgcgtcgaggccggcacagagaag
gtggtactggtggcccaaggcggcgccgtcaaggtgggccaggacttcatgggccgcgtg
tcgttgcccagtgatgcgcctgagatgggcgaggccgcactcgccgtcactgggctgcgg
gcgagtgacgccggacgctacaaatgcgaggtcacgcgagggatggaggacagacgcagc
agcgccatcctcagcgtcagaggtgttgtgttccattaccgggccaacaccagccgctac
tctttggacttctcggccgcagcggaagcttgtctctcagtggacgccgccatcgccacg
ccggagcagctgacagccgccttccacgacgggctggaccactgcgacgcgggctggctc
gccgaccgcagtgtcagatatccaatcacacaacctcgtccagggtgcgaaggcgacttg
aagagtcgacccggcgtgaggacgtacggcatccgattagccactgagaaatatgacgtc
ttttgctacgttgagaagctcgacggggaagtcttctacccgccatccatcagcgacaag
ctaaccctgcaggaggcggcggccgagtgtaggaaacacgacgctgtgctggcatcgccc
gggcaattgttcgccgcttgggcggcagggctgaaccaatgcgactacggctggctgtcg
gacggcagcgtccgctaccccatcaatgccccctggccgcagtgcggcggaggccagctg
ggggtccgcacgctctacaagtacgagaaccagactgggtacccggacccggaggacagg
cacggagcgtattgcttcaaagccaagcttccagaagcgacgctcacgagtccaaccagc
accggagtggtaccggaacccagcgcgactaacgcgcagcacacttcacccgcatcccac
ccagcgacatccgagcttcaaaccaatcacgtcactcctccagcgtcgcacgatgatgat
gccatcacagagaagcatctgacacagctggagtcgtcgtttttcaccaccgcgtcggcc
ctccacactacacacgggatatcgggcggcggcgagtctggcagcagcgacgaagactcc
ccgagcggcgccgacccagaagtagaaggcgtcactccggcgccgcttttccccgactgg
agcgtcacgcataaaacggccttggtttttaaagaggaagcttcgcccgggagcttcagt
gtcgaccaatcggtggctgtacccggcgagggcgggtccacggccaagccgccgttccac
atcatcatcgtcaacgtgcatgacaaaaatcaatcagtcgatcgcatcttgcagctcctc
aactcacccgcgggcgatgctgtcgtcttcccgcaaatcaccgacctctcgcagtcgatc
ggcgagctcgtccgcggcagcggggacgccgatggcgcagaagcgccgttgcaggccatc
agcttcatcaacgggaaacacaaagtgacgttggacgcgcggccgccggaggaggcgcga
ggggatcagtttgagaccgccgcccccattcgggtgtcggaggaagaggcaagcgtgatg
ccgtttgactacgccgcccttggggaggagcccgctgagggtccagtgacggacggccgc
catcgagactttctttattacttctcaacgccagcatcaccgacaaggacccccagccca
tccgcctcgtccagggacaccaccagggaaggctccgcagacgacggccttgccggcacc
ctcgacgcatcgcccgtcagtaccaacgggatggaactcggaggctctgaggatccctcg
ttcgccccgggaactaagacactggaagccaatgtccccacaaaggatgacgaggggtcc
acatccggccaagaccacgccgagatggaggaggagccagccgcgctggcacccacgccg
cccacccctggcggcttgagtggcgagcagctgtcaggaaacggggaggctcagccggac
cctcagctccctcagcccgccaacctgcgccaagaggagtctacgtcatcgtttagggcc
caagaaaaactctccaccgtcactccaccctcgcacactgtcagtaaccacgccgtcccc
cagtgggcgctgagccctgacccggccgccaacccgaccctgccggaggacttcctggac
tacgacagcaagatgactccccagctggtggagtcgcggctcccctggcccgaagagact
atggaccagcctgacctgctggaggccacttttatcaatgtcacagacgtccagccatgc
tctgtgaacgtctgtcaaaatggcggctcctgctaccggagaggctcagagagggtgtgc
gcctgtgcaccaggatacaccggggggcgctgtcaaacagacgttgacgagtgccagtcc
aacccatgtctcaacggcgccacctgcctggacgcggtcaacggcttctcctgcctgtgc
ctgcccagctacaccggaaagctgtgcgaacaagactcggcgtcgtgcggctcagggtgg
cacaagttccagtctcactgctacaaacatttcccccaacgtcgcacttgggacgcggcc
gagcgggagtgccgcctccatggcgctcacctggccagcatcctgtcgttccggaacttg
gacttgatgtgtgcaggtttggtcgacgactaccagtggatcggcctcaacgacaaaatg
tttgagggagacttccgctggaccgaccacaatcccatgcaatacgagcactggcgtccc
aaccagcccgacagtttcttcgagacgggcgaagactgcgtagtcctcatctggcacgcc
gccggccagtggaacgacgtgccgtgcaattaccacctgggcttcacctgcaagaagggc
acagtgtcatgcgggccgccaccagccgtgagggacgcccgcgtgttcggcgccccacgc
tcccgctacgaggtcaacgccttgacgcgctaccactgcaagccgggcttcatccagaaa
cggacgcccaccatccgctgtcgtcccaatgggcgatgggacgtccccaaagtcatctgc
atcagcccggccacctatcgcacgcaactttcggtcgtcacccaccgccacgtccaccac
gcgaccagtcaccatgacgatcggcggcagaactacaacggccagcagagcttcctgaac
cctctgctggatctggaacgatga
DBGET
integrated database retrieval system
