Hippocampus comes (tiger tail seahorse): 109525423
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Entry
109525423 CDS
T04969
Symbol
scarf1
Name
(RefSeq) scavenger receptor class F member 1 isoform X1
KO
K24318
scavenger receptor class F member 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109525423 (scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109525423 (scarf1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hcq04990
]
109525423 (scarf1)
Membrane trafficking [BR:
hcq04131
]
Endocytosis
Phagocytosis
Scavenger receptors
109525423 (scarf1)
Domain-containing proteins not elsewhere classified [BR:
hcq04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
109525423 (scarf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
109525423
NCBI-ProteinID:
XP_019741443
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MGRGNPVALTPMHNGHRTTRCGERTGTREGWRVDLVKPRHLKGDILKRYLQKMKLLLTTL
TTLCCCWLSCSLTLDSAGRNVCHNPRDPSTLVCCTGWRQDGKECTIPVCEGDQACLKDEL
CVYPGVCRCPPGYYGAHCKTRCPPEFWASDCHQVCPCHPHGHCHPVTGECTCNPNRWGPL
CQYACKCARHGVCHPVYGNCTCDEGWWMSTCIKPCQCVPGGSVGPGCDQLTGRCQCHKGH
WGLKCPVTCNCYLSQCNQRTGVCECEAGWWGPSCDRRCNCDLTHSSCNPVTGQCLCHPGY
EGDYCNQPCKPGMFGSGCKMSCGRCQGDEACSSTDGACAACETGWNGTRCDRLCLPGYYG
NNCQETCPRCRNNEPCDPKSGECWSCNPGWTGPRCKEVCSNRTYGEACHFLCSPCYHGDC
HHVTGKCVCRSGFQGESCNDSCSTAQFGLNCSSACDCGEGVRCHPVTGACPNSGRAALLA
GLLLPLLLLLLAVLCCCLCCGGGPADGKDRMTVADAGPSVRMKYHVYSVLANIGAALPCI
SDWSSGLPRVTVSHHDPELTFNHSFIEPPSSGWVTEGSSFDSDEEEGEALYCVPPREDVP
GMEGSHFQEMSSKCNMLLDPSGFSSEDVTSPFDIPRTSSIAKAKRPSVSFAEGTRFSPKE
RRGSAHDAASLSGHPRKPKSNRGALTLSAGPDEEDGDDAKEREDGVVVQVTDHQGLSCEV
VDQEDDRNSSNTTASGQRRTISNTAAQHRALDHQSGVSNKVTTVYVTVGKTGKPTSKLEP
SSEGPVQAMLRRLGSLQRQREQGPGKSKAKVTEAFPKPPRRKLGARRSVWEHGGPSGVEP
AISKPVRRKHASQNDPQMASADTGSSESIPLKRPLSSILKSVPEVASADFHGSFGRQGHE
PSRVQTESSYLTVGPAEDAATLSEVMTADGVVGSVKDEPCYENVMITHSYTSNTNA
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaggaaacccggtggctctgacccctatgcataacggccacaggacgactcgg
tgtggagagagaacgggaacaagggaagggtggagggtggatctcgttaaaccgagacac
ttgaagggagacattctaaagagatatttgcagaagatgaagcttctcctcacaactctg
actactttatgctgctgttggctgtcttgctcgctcacgctggactctgctggaaggaat
gtctgccacaaccccagggatccatccacccttgtgtgctgcacaggctggcgtcaggat
ggaaaagagtgcacgatacccgtttgtgagggtgatcaggcctgtctgaaggatgagctc
tgtgtctatcctggagtttgtcgctgcccaccaggctactatggagctcattgtaaaaca
cggtgtcctccagagttttgggcatcagactgccatcaagtgtgcccgtgtcacccacac
ggccactgtcaccctgtcacgggcgagtgcacctgcaacccgaaccgctggggtcctctg
tgtcaatacgcctgcaaatgtgcccgtcacggagtctgccaccctgtgtacggaaactgc
acctgcgacgagggctggtggatgtccacttgcatcaaaccttgccagtgcgtccccggg
ggttcggtgggtcctggctgcgatcagctgacgggccgctgccagtgccacaaaggacac
tgggggctgaaatgtcccgtcacttgcaactgctacctgtcgcagtgcaaccagcgcacc
ggcgtgtgtgagtgcgaagccggctggtgggggcccagctgtgaccggcgatgtaattgt
gacctcacacacagtagctgcaaccctgtcaccgggcagtgtttgtgccacccggggtac
gagggcgactactgcaaccagccgtgtaaacccgggatgtttggcagcgggtgtaaaatg
agttgtggacggtgtcaaggagatgaagcgtgttcctccacagatggcgcatgtgcggcc
tgtgagaccggctggaatgggacacggtgcgaccgcctgtgcctgcctggttactatggc
aacaactgccaggagacgtgcccgaggtgcagaaacaacgagccctgcgatcccaaaagt
ggggaatgttggagctgtaatccgggatggacaggacccaggtgcaaggaggtctgctct
aacaggacgtatggagaggcttgccacttcctgtgcagcccatgttaccatggtgactgc
catcacgtgacaggaaaatgcgtctgtcgatcgggcttccagggggagagttgcaacgac
agttgctccactgcacagtttggcctcaactgttcctcagcttgtgactgtggcgaaggc
gtgagatgccacccggtcactggtgcctgccctaacagtggccgagctgctctcttggcc
ggcctgctgcttcctctactcctgttgctcctcgctgtcctctgctgttgtctgtgttgc
ggaggaggtccggcagacggcaaagacaggatgacggtggcagatgcagggccgtcagtg
cggatgaaatatcacgtctacagtgtcttggcgaacattggtgctgccctaccctgcatc
tctgactggtcctctggcctccctcgggtcactgtgtctcaccatgaccccgagctgacc
ttcaaccacagcttcattgagcctccttcatccggctgggtgactgaagggtcgtccttc
gacagcgacgaggaggagggggaggctctttactgtgtccccccgagagaagacgttcca
ggaatggagggtagccacttccaggaaatgagctccaagtgtaacatgctcttggacccg
tcgggcttcagcagcgaggacgtgacatccccctttgacatcccccgaacctccagcatt
gccaaagccaagcggccgtctgtctcttttgcggagggcacccgcttcagccccaaagaa
aggcgcggctccgctcacgacgccgcctctttgtccgggcaccctcgcaaacccaaatca
aaccggggggcgttgacgctctccgccggacccgacgaagaagatggagatgatgctaag
gagagggaagatggcgtagtcgttcaagtaacagatcaccaaggtttgagctgtgaggtc
gtggaccaggaggatgatagaaactcgagcaacacaactgcatcaggacaaagacgtacc
atatccaacacagctgctcaacatagagctttggatcatcaatccggcgtctcaaacaaa
gtcaccacagtgtacgtgacagtggggaagacgggaaagcccacgtccaagctggagccg
agttcagaaggccccgttcaggccatgttaaggcgactcggaagtctccagagacaaaga
gagcaggggcctggcaaaagcaaagccaaggtcacagaagccttcccaaagcctcccagg
aggaaactcggagctcggaggagtgtgtgggagcacggcgggccttcaggagtcgagccc
gccatcagtaaacccgtgaggagaaaacacgcctcacaaaacgacccccaaatggcttcc
gccgacacagggtcgtcagaaagcattcctctcaaaagaccgctgtcgtccattttaaag
agcgttccggaggtggcgtcagctgactttcatggctcattcggaaggcagggacatgag
cccagtagggtgcaaactgaaagcagttacttgactgtggggccagcagaggacgctgct
actctgagtgaggtcatgaccgctgacggtgtagtggggagtgtgaaagatgagccgtgc
tatgaaaacgtcatgattacacactcgtatacctcaaacacaaacgcgtaa
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