Hippocampus comes (tiger tail seahorse): 109525651
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Entry
109525651 CDS
T04969
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109525651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcq03000
]
109525651
03021 Transcription machinery [BR:
hcq03021
]
109525651
03036 Chromosome and associated proteins [BR:
hcq03036
]
109525651
Transcription factors [BR:
hcq03000
]
Eukaryotic type
Helix-turn-helix
ARID
109525651
Transcription machinery [BR:
hcq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109525651
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109525651
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
109525651
NCBI-ProteinID:
XP_019741908
LinkDB
All DBs
Position
Unknown
AA seq
2263 aa
AA seq
DB search
MAAQVASAATLNTSPASELKKPDREPKEDTVPGEKQSDKKQPGLEGESPCRGDLQDGADV
GNAGGGGEPEMKNGNGNPPRANNNNQNDTVGPEGNNHPGMVHHHNPAFPPPSYGYSQHYG
RAPFHQHGGQQSPGMAAAAGPAVQPGNIMDPYQPNSHDFSNHQFNSYSPFPNRTPYPGQA
YAMNSPRSSQAPTAGGQPAKQQTPAGGPTAMAGSYNNQRYNIGNPQPTSTPTLNKLLTSP
SSTRAYSTYPSSDYTSQEGASKGAADMGASGQYGGSNPAWQQRTHHPSPMSPGSAGQPLA
RSQPPASMDPMAKMRGQPYGASSPYSQQSQQGPPTGQQGPGYPGQGYGPPGPQRYPLSMQ
GRTPGTMGGMPYGPQMGSYGQQGPGGYASQGQGPYYGQPAQGPHPSQHQTPYSQPQPGQP
GGQAPYPGQPHQPPPSAPHVQGGAPYQQPHIAPQTQVPPQGPAQPQPPYSQASAPQSGQS
PYQQQGQSGQTPQQPSSQAPPGAQGQTNYPTSAQPPQQSTSQQQQQSQTTQHSQGQSGAY
PQNPQQQQQAQQSPYQRFPPAQQQELPQDSFQSNAPPSSQQKGGPEDSQGRPSSLPVSHD
LSGSIDDLPTGTDGALSPGVSTPGVSSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPAG
SPASASTPRTGQLSPANMPGNQMPPRPSSVQSDGSLHPGMSQSPLAPDRGFMQRNPQMPP
YGSPQSASALSPRQSSGGQMHPGMGPYQQNNSMGGYGQQGGQYGPQGYPRQPGYGNMPNA
NYPGTGMGPMAGQGGGQPYAGIPPGRMPPNQMGARPYGPSMGPNMGPNMGNMPSQVSSAM
CPPPGMNRKPQDPAAMQHPASNSLHNRMSGYPNMPPGMMGSGPPYGPSMNSMPGMMNTQG
GSPYPMGPNMANNSSGMAPSPEMNNKMNNKVDGSGTPKPEPKSKKSNSSTTTSEMITRLY
ELGPEPERKMWVDRYLAFIEEKAMGMTNLPAVGRKPLDLFRLYISVKDIGGMAQVNKNKK
WRDLATSLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPEIFTDNKKNQTAKVQPP
SPASLCSTAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMAPIPPGSRSSVNLQ
DPFSEGSDPAYPRKNMTPNSAYQSGMSTPEMQGRLGPYEPNKDPFSNMRKVGEQFLPANQ
GPNSGVGDQQQQPPQQQQQQPPFNRGPPGAMGTMPLGPRQQYPYGPGYDRRTEPGMGPEG
NMGSGAPQPNSMMPANADTGMYSPNRFPPQQPRHDSYGNQYPGQGTPPSGSYPNQQPGMY
PHQQQGYKRPVEGGYPPSKRHESEYSGPFPGGQPPPQQQQQGGVPAPSSGQQEPYNQYSG
SGPYPGSDRRPPGPGNQFPFPFGRERMQGAAGPNSQAAMAPQMMQSGPEGPQGGMWQGPR
DMNYQNYHGRQGGPGGPPQGSGYPGMTRSEEMISSEQRMNHDSQWGGQMGPRQPPYGPAG
PGQPMARSVQSNYQPPQGVQNHIPQVSSPASMPRPMESRTSPSKSPYMHGVMKMQKAGPP
VPASHIVPTAAQSPLIRRDMPFPIGSVEASHPVLKPRRRLTMKDIGTPEAWRVMMSLKSG
LLAESTWALDTINILLYDDGSISTFDLNTLPGLLELVVEYFRRCLIEIFGILREYEVGDP
GQRTLLDPDALKELVGGIEEEEPHIEDADLEEEDDVDEEEQGTERPPHIKQEDEHKECSE
SRKRDVKAGDEHRQDEGSSSDQTDSLASSSAQDKPKQGSKFDKFPLKLVRKRNPFVSAQT
NNHGKVQEFDSGLLHWSAGGGDSTEHIQTHFEPRKDFLECRQRIPVPQSVLKRRIREDFL
DYSLPAEEEKKNEDEDRSKETSSSGKATVSENSAALTNEENKSESKTAEQSHQNNNRPIP
SVMSVVTHQVTAILEDEPHSKDEGPLVSLANWQDSLARRCVCISNIIRSLSFVPGNDHEM
SKHPGLLLLLGRLILLHHRHPERKQAPLTYEKDEDTEEGTGQRDEWWWDCLELLRENTLV
TLANISGQLDLSVYPESICLPLLDGLLHWAVCPSAEAQDPFPTLGPHSALSPQRLVLETL
SKLSIQDNNVDLILATPPFGRLEKLYGNLVRLVGERKVAVCREMAVVLLANLAQGDTMAA
RAIAVQKGSVGNLLGFLEDSLAATQFQQSQSSFVHLQGMHFEPTSPDMMRRAARALHALA
KVDENHSEFTLHESRLLDLSVSPLMNSLVSHVICDILFLIGQS
NT seq
6792 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgccgccactctgaacacaagcccggcttccgagctcaaa
aagccggatcgagagcccaaggaggatacggtaccgggggagaagcagtccgacaaaaag
cagccggggttggaaggggaatcgccgtgccggggggatctgcaggacggcgccgacgtt
ggaaatgcaggaggaggaggggagcctgagatgaagaacggcaatgggaacccgcccaga
gctaacaataataaccagaatgacaccgttggaccggagggaaacaatcacccgggtatg
gtgcaccaccacaaccccgctttccctcctccgtcgtacggatacagtcagcactacggt
cgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgctgcgggt
ccggccgttcagcccggcaacatcatggacccttaccaacctaattcgcacgacttttcc
aaccaccagtttaacagttacagcccgttcccaaacaggactccgtatccgggccaggcg
tacgctatgaactcgcctcgcagtagccaggcgccgacagctggggggcagcctgctaag
cagcaaacaccagcgggaggacccacggccatggctggatcttacaataaccagagatat
aacattggaaacccgcagcctacatccacaccgacgctcaataagctcctgacgtccccg
agctccacccgggcttattccacctacccgtctagcgactacactagccaagagggagct
agcaagggagcagcagacatgggcgctagcggtcagtacggaggcagcaatccggcttgg
caacaaagaacccatcacccgtcgcccatgagcccgggtagtgccgggcaaccgctagct
agaagccagccacctgcttccatggacccaatggcgaaaatgagagggcaaccgtacggt
gccagtagcccgtacagtcagcagtcgcagcaaggacctcccacagggcagcagggccct
ggatatcctggccaaggatatggcccaccaggtcctcaacgatacccacttagcatgcaa
ggacgaactcccggaaccatgggtgggatgccctatggtccacagatggggtcttatgga
cagcagggaccgggaggatatgcttcacagggccagggcccatattatggtcagcctgct
cagggtcctcacccaagccagcatcaaacaccctattctcagccccaacctggacaacca
ggaggtcaagcaccttacccggggcaaccccaccagccaccaccctcggcaccacacgtc
caaggaggagctccttatcagcagcctcatattgccccacagacccaggttccacctcaa
ggccccgcacagcctcagccaccatattcccaagcgtcagcccctcagtctggccagtct
ccgtaccaacagcagggacaaagtggtcagactccccagcagccaagttcccaggctccc
ccaggagcacagggacagaccaactacccgacatcggcgcagccgcctcagcagtccacc
tcgcagcagcaacagcagtcacagaccacccagcactcacaaggtcaatctggagcatac
ccacagaaccctcagcagcagcagcaagcacagcagtcaccttatcaacgctttcctcct
gcacaacaacaggagctaccacaagactcatttcagtccaatgctccaccatcatcacag
caaaaaggtggtccagaagacagtcagggccgtccctccagccttccggtcagtcatgac
ctgtcggggtccattgatgacctgcctactggtacagacggtgccctgagtcctggagtg
agcacaccaggtgtttcgagcagccaaggcgagcagagcaacccggctcaatcgcccttc
tcacctcacacgtctccccacctgcctggtatccgaggaccatcaccatccccggcgggc
tccccggccagtgccagtacacctcgcactgggcagctgtcacctgccaacatgccaggc
aaccagatgcctccaagaccatcaagtgtgcagtcagatggtagtcttcaccctggcatg
agccagtctcctctggctccagaccgaggatttatgcagagaaaccctcagatgccccct
tatggttccccacagtcagcctctgcattgtcaccacgccagtcctcggggggacaaatg
catcctgggatgggtccatatcaacaaaataactccatgggtggatatggacaacagggg
ggacaatatggcccccagggttatcctcgccaacccggctatggtaacatgcccaatgcc
aattaccctgggacgggcatgggtccaatggcgggtcaaggtgggggacaaccatacgct
ggcatacccccaggaaggatgccaccaaaccaaatgggggcgcgtccatatggccccagc
atgggtcccaacatgggccctaacatgggcaacatgccatcccaggttagctcagcgatg
tgcccccctccaggcatgaacaggaaaccacaggatcctgcggccatgcagcacccggcc
tccaattcattgcacaacaggatgtctggttatcctaacatgcctccaggcatgatgggc
tctggacctccgtatggtccttctatgaacagcatgcctggaatgatgaacacccaaggt
ggatccccttatcccatggggccaaacatggccaacaactcaagtggtatggctcctagt
ccagagatgaacaataaaatgaataacaaagtagatggaagtggaacacccaagccggag
cccaaatcaaagaaatcaaattcctctacgacgaccagtgaaatgataacgcgtctttat
gagttaggaccggaacctgaaagaaagatgtgggtggatcgttatttggcttttattgag
gagaaagccatgggcatgaccaacctgcctgcagtgggacgcaaaccccttgacctcttc
cggctgtatatatcagtaaaagatattggaggaatggcacaggtgaataaaaacaagaaa
tggcgagatttggccacgtccttgaatgtaggcacatccagcagtgctgccagttctttg
aaaaaacagtacatccagtgtttgtatgcctttgagtgtaaaatcgagcgtggtgaagat
cctcctccggagatatttacagataacaagaagaaccaaaccgcaaaggtccagcccccc
tcaccagcgtccctctgctccacagctgggtcaggctctctgcagggccctcagactccc
cagtcgaccagcagttctatggctgagggtggagacttaaaacctccaaccccagcctcc
actcctcatagccagatggcccctattccacctggttccagaagcagtgttaacctgcag
gaccccttttctgaaggtagcgaccctgcttacccacgtaaaaacatgacacccaactct
gcctatcagtctggcatgagcaccccagaaatgcaggggcgcctgggcccctatgaaccc
aacaaggacccgtttagcaacatgagaaaagtcggggagcagtttcttcctgctaaccag
ggccccaacagcggggtgggcgaccagcagcagcaaccgccacaacagcaacagcagcag
ccaccattcaaccgaggaccacccggggccatgggcacaatgccactgggacccagacaa
cagtatccttatggaccaggctatgacaggagaactgagccaggaatgggtccagaaggc
aacatgggatctggtgctccccagccaaactctatgatgcctgccaatgccgacactggg
atgtattcgccgaatcgcttcccgccacagcaaccacgacatgattcctatggtaatcag
tatcctggacagggaacgcccccttctggctcctaccctaatcagcagcctggaatgtac
ccacatcaacagcagggctacaaacgtcctgtggaaggaggctaccctccttcaaaacgt
catgagtccgagtacagtgggcctttcccagggggacaaccaccaccacagcaacaacag
caaggcggtgtcccggcaccctcttcgggacagcaagagccatacaatcaatatagcggc
agcggaccttacccgggctctgaccgccgtcctcctggcccaggcaatcagttcccattt
cccttcggccgtgaacggatgcagggagcggccgggcccaattctcaggccgccatggcc
cctcagatgatgcagtcaggcccagaaggccctcaagggggcatgtggcaaggcccacga
gacatgaactaccagaactaccatggcaggcagggtggccctgggggcccgccccaggga
tcgggttaccctgggatgactcgctctgaagagatgatttcgtcagaacagcgcatgaat
catgacagccagtggggtggtcagatgggcccacggcagcctccctatggtcccgctggg
ccaggtcaaccgatggctcgttctgtgcagtccaactaccagccccctcagggcgtgcag
aaccacattccacaagtgtccagcccagcctccatgccgcgccctatggaaagtaggaca
tcgccaagtaaatccccctacatgcatggagtgatgaaaatgcaaaaggccggccctcct
gtgcctgcgtcacatatagtgcccactgcagcgcagtcgcccttaatcagacgagacatg
cctttccccattggctctgttgaagcttcccatcccgttctgaaaccacgtcgcaggctc
accatgaaagatatcggaaccccagaagcctggcgagtcatgatgtcattaaagtccggt
ctattagctgaaagtacctgggctttagatacaatcaacattcttctctacgatgatggc
agtatttctacctttgatctcaatacgttgcctggcctactggagttggttgttgagtat
ttcagacgttgcctcattgagatctttggaattctgcgggaatatgaggtgggggacccc
ggccagagaacgctacttgatcctgatgccttgaaagaactcgtgggtggcatagaagaa
gaggagccgcatatagaagatgctgatctggaggaagaagatgatgtggatgaggaggaa
caaggcacggaaaggccacctcatataaaacaggaggacgagcataaggaatgttccgag
tcacgaaaaagagatgtgaaggccggtgatgagcacagacaagatgagggatcttcatcc
gaccaaactgactcattggcgtcgtcatcggcccaggacaaacccaaacagggcagcaag
ttcgataagtttcctctaaagttggtacgaaagagaaatccatttgtttctgcacagaca
aacaatcatggtaaggtgcaggaatttgacagtggattgcttcactggagtgccggagga
ggagactcaacggagcacattcagacacattttgaaccccgtaaagactttttggaatgc
agacaacgaatacctgtgccccaaagtgtgctgaaaaggcgaatccgtgaagatttcctt
gattatagtttgccggcagaagaggagaaaaagaatgaggatgaagataggtcaaaggag
acatcctcgtcagggaaagcgactgtgtcagagaacagcgccgccctcactaatgaggag
aacaaatctgagtcaaaaacggctgagcaaagtcaccagaataacaacagacccattccg
tctgttatgagtgttgtaacgcatcaggtcaccgccatcctggaggatgagcctcacagt
aaagatgaggggccactcgtctcactagcaaactggcaggattccttggctcggcgctgt
gtttgcatctccaatatcatacgcagcctctcctttgttccaggaaatgaccacgagatg
tccaaacatccagggctgctgctcctactagggcgcctcatacttctccaccaccggcac
cctgaacgcaaacaggccccgctgacctacgagaaagatgaggatacggaagagggtacg
ggccagagggatgaatggtggtgggactgcttggagctcctgagggaaaacacgctggtc
actttggcaaacatctcgggccagctggacttatccgtctaccccgagagcatctgcctg
cctctgttggatggccttctccactgggcggtctgcccttcagctgaagcccaggacccc
ttccccaccttgggtccacacagcgctttgtcccctcagagactggtcctggagacgctg
agcaagctaagcatccaagacaacaacgtggacctcatcctggccaccccgccgttcggt
cgattggagaagctctacgggaatctcgtgcggctggtcggagagaggaaagtggctgtc
tgcagggagatggccgtggttctgctggccaatctggcccagggtgatacaatggcagcc
cgggccatcgccgttcagaaaggcagtgtgggcaacttgctgggcttcctggaggacagt
ctggcggccacccaattccagcagagtcagagttcttttgtacacctacaggggatgcac
ttcgagcccaccagcccggacatgatgaggcgggctgcccgggcactgcacgcgttagcc
aaggtggatgagaaccactcagagttcacactacatgagtcccggctgcttgacctttcg
gtgtctcccctcatgaactcgctggtttctcacgttatctgtgatatcctctttttgatc
ggccagtcctga
DBGET
integrated database retrieval system
