Hippocampus comes (tiger tail seahorse): 109525855
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Entry
109525855 CDS
T04969
Name
(RefSeq) fibronectin-like isoform X1
KO
K05717
fibronectin 1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04510
Focal adhesion
hcq04512
ECM-receptor interaction
hcq04810
Regulation of actin cytoskeleton
hcq04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109525855
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109525855
09142 Cell motility
04820 Cytoskeleton in muscle cells
109525855
04810 Regulation of actin cytoskeleton
109525855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109525855
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hcq04147
]
109525855
00536 Glycosaminoglycan binding proteins [BR:
hcq00536
]
109525855
04990 Domain-containing proteins not elsewhere classified [BR:
hcq04990
]
109525855
Membrane trafficking [BR:
hcq04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
109525855
Exosome [BR:
hcq04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
109525855
Glycosaminoglycan binding proteins [BR:
hcq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109525855
Domain-containing proteins not elsewhere classified [BR:
hcq04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
109525855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
fn2
NDNF
Interfer-bind
GH101_dom-5
Glyco_hydro_66
CopC
Motif
Other DBs
NCBI-GeneID:
109525855
NCBI-ProteinID:
XP_019742233
LinkDB
All DBs
Position
Unknown
AA seq
2454 aa
AA seq
DB search
MSGVPLTRVLVAVCVCSAMVHGVPKNKRQSHQYQVYPDYHHADVVSEVGCEENGRSFRVN
EQWEKTYRGSTLLCTCNGAQGIKCKTKPEVEESCYDKHNDRTYRVGETYERPKDGMMWDC
TCIGSGRGKISCTIANRCHEGGRSYKIGDTWQRPHDTADYMLECVCLGNGKGEWTCKPVA
ERCYDNNAASSYVVGETWEKPYQGWMMLDCTCLGEGNGRITCTSRNRCNDQDTRMSYRIG
DTWSKNDASGHTLQCLCLGNGRGEWKCERHNAGQGSVVVSPLHPQLQTEPPIEGTCRTDS
GATYYDGQRWIRSQGSKQMLCTCLGNGVSCQEWEARNQVYNGNSNGQPCVFPFVFMGKTY
YSCTTDGRTDGQLWCSTTSDYEQDQQYSFCTEKNAAIVATRGGNSNGALCHFPYLYSGRN
YTDCTSDGRRDSMKWCGTTYNYDADQHFGFCPMAAHEEVCTTNDGVMHRVGDKWDKRHDV
MGHMMECTCLGNGRGEWNCIAHSQLRDQCIVEGLTYDVNQEFSKRHDEGYMMNCTCYGQG
RGRWKCDAIDQCQEPQTRAFYQIGESWDKVIHGIHYRCYCYGNGIGEMRCEPQQNYQGGH
RPVQVIITEAGKQPDSHPIQWNPPSSVQITQYILKWKIKNSRSPWREVVVPGHLNSYTIS
GLRPGVTYEGQLISILRYGQREVTRFDFTTTHGSLETSEGETNKPPPLVDTSESVTEITS
NSFVVSWTSASATISGFRVEYELSEEGAPRQVLDLPGTSTSVTIGNLLPGRRYNVNVYEV
PDDGDATLILSTSQTTAPDTPAQHAIDDVGETSIRIRWSRPQAPITGYRVVYTPSVEGSS
TELNLPDTETSVTLVDLHPGVLYNISIFAVEENQESQPVFLQVQTAGSSQPEEVAAPTDL
QFYEVTDVKITITWNGPPSEVTGYRVTFSPVGPDGTEIRPLQLPVSPNAYADITHLQPGT
LYRFYVYAINGGVESEPLMGEMYTKPDAPTNVQFTDIGPDSALVSWEAPRAIVSGYRLFV
SIEGSSPIEKRIPGGVTQYALRNLRPETDYTATLHSELNSVLSEPITTHFTTAPQMGNAP
AFNTEVTDSSIIITWIPVRRFSYKLSVLPSQQGESPRHRTSDTGRLYVSGLIPGTQYTYS
VQPIFNGRPRGNPITRNVVTSLSPPTDLRVQSNSDTGDLTVHWTASKTPDITGYRVSSTP
TSGQKGNSNEEFVRADQTSCMLDNLNLGVEYNISVFAVKDHLESVPVSTVITPDIRPPRH
IHFVDITDTTIGLRWIPLNYSTLTGYRITVTTAGESLPIFQDMVDASAGYYTLRGLEPGV
DYDISIVTVTEEGESEPTTHTKQTQAVIPAPTNLQFGGVGPDHIRVTWTVPHVATPSDIS
RFVIRFSPVTEDHDLKEVNVGGASNTFLLQNLLPDTEYRISVVYIYGERESYPATGTQRT
TLDSPTALDFSDIQTNSFTIHWRAPSSSITGYRVRHQRTNGGRTKDERLPPSKTHYTLTG
LTPETEYLIAVYAVKGNQESQPVTGTQATISDAPTDLEVVSSSPTSITIRWDAPSVAVNQ
YRITYRGTDGGAPQEFTIPGTQTTATITDLQPGSDYTITVYAVTARGDNPASNTPVYITH
KTDIEPPANMDVTDVSDNAITVRWSPARGPITGYRVTGAPKNGVGPSYSRDVSPAETEMT
LTGLMPTVEYVVSVSALGTDGQPSSAVVENAITAMDRPKDLTFSDIDANSMRIAWDSPEG
TVTSYRVLYSNPEDGEKELRPAPRGDQDNVAIKGLRAGTEYTVKVIALHGRTPSTPLVGT
QATVIPAPTNLVISEVGPTSFEVSWQAPNARLTGYRVVVNPENINSPAKELNVAPDTTRV
VIPGLMVATKYQIHVYALKNSVTSRPLEGEATTLEDVSPPRRVRIMDVKDDSFTLNWRTK
VETITGFLLEATPQGSSRPTVTKSIPADVYTYTVTGLKPGTTYSIHLYTLNGNTRSAPVT
LTVQTAKPVVQAPTNLQVTSLTPTYISFTWQPPATPITGYYVTYAEPRATPQELKPRPHA
GQNYATISGLKPDTEYIIKIVAIQNTQRSTPLVGRIRTQPDSLLPVPQPHRPGDVTDRLD
VPETNFDNRVQLVGNNGQDGLGGQSQHVEYTEYNNNNRATPQSPYGQVQEPLVFVPLPDA
NGRRKPYVKLNVPYGTIFANETGLPQEAQTRTPISWKPYSQSNAYLVSCNPVTHLDEKMF
QVRLPGTATTATLVGLTPGADYNVLVEALKGALKHKVLEQVVTAANTIQEGAPPTDDSCY
DTLTATYHDVGAQWERMSETGFKLWCTCLGLGRGHFRCDSSKWCHDNGQNYRVGDKWDRQ
AENNHLMSCTCLGNGKGEFKCEPHESVCYDEGKTFQVGNQWQKDYLGAICTCTCYGGQRG
WQCENCRRPASDAGVLQPVQYGTDTLHRQNIHCPIECLRPGLLADALVVPDPRE
NT seq
7365 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgtcccactcacgagggttctggtggcggtgtgcgtgtgcagcgcaatggtc
cacggcgtgccgaagaataaaagacaaagtcaccagtatcaggtgtatcctgattaccac
cacgcagacgttgtcagtgaagttggctgcgaggaaaacggtcgctcattcagagtgaac
gagcagtgggagaaaacttaccggggcagcacgctgctgtgcacctgcaatggagcgcaa
ggcatcaaatgtaaaactaagccggaagtggaggagtcttgttatgataagcacaatgac
cggacataccgggttggtgaaacatatgagagaccaaaggacggaatgatgtgggactgc
acttgcatcggatctggtcggggcaagatcagctgtaccatcgcaaatcgttgccatgaa
ggcggcaggtcttacaaaatcggggatacctggcagaggcctcatgatactgctgactac
atgctggagtgtgtgtgtcttggaaatggcaaaggagagtggacctgcaagcctgtggct
gagcgttgctacgacaacaatgctgcctcgtcgtatgtggtgggggagacgtgggagaaa
ccctaccaaggctggatgatgctggactgtacttgcctgggcgagggaaatggccgtatc
acatgcacctctaggaaccgttgcaatgaccaggacaccagaatgtcctaccgcattgga
gacacgtggtccaagaatgacgccagtgggcacacgctgcaatgcttgtgtttgggaaac
ggtcgaggagagtggaagtgtgagcgacacaatgcaggccaaggttcggtggtggtgagc
cccctccatcctcagctgcagacggagcctcccattgaaggaacctgccgcaccgactct
ggagccacctactacgacggacagcgttggatcagaagccagggcagcaaacagatgctt
tgtacttgtctgggcaatggagtcagctgtcaggagtgggaggcccgaaatcaggtctac
aatggcaactccaatggccagccctgcgtattcccatttgttttcatggggaagacctac
tactcctgcaccacggacggacgcacggatggccaactgtggtgttcgaccacctcagac
tatgagcaagaccagcagtactctttctgtactgagaagaatgcagccattgtggccaca
cgaggaggcaactccaacggcgccctttgccacttcccctacctgtacagcggccgcaac
tacaccgactgcacatctgatggccgtcgtgacagcatgaagtggtgcggaaccacgtac
aactatgatgccgatcaacactttggattctgccccatggctgcccatgaggaggtgtgc
acaactaacgacggtgtcatgcaccgcgttggtgacaaatgggacaaacggcatgacgtc
atgggccacatgatggagtgcacgtgcctcggcaatggtcgcggggaatggaattgtatc
gctcactcacagctgcgagatcagtgtattgtggagggcttgacctatgatgtcaaccag
gagttctccaagcgccatgatgagggctacatgatgaactgcacctgctatgggcaggga
cgcggacgatggaagtgcgatgctattgatcagtgtcaggaaccccagacaagggccttc
tatcaaattggagagtcatgggacaaagtcatccatggcatccactatcgctgttattgc
tacggcaatgggattggagaaatgaggtgtgaaccccagcagaattaccaaggtggccac
aggccagtccaagtcatcatcacggaggcgggtaaacagccagactcgcaccccatccag
tggaacccgccctcatctgttcagatcacgcaatacatcctcaagtggaagattaaaaat
tctcgcagcccctggagggaggtggttgttcccggtcacctcaactcctacaccatctcc
ggtctgcgtccgggggtcacctatgagggtcagctgatcagcattttgcgctacggacag
cgggaggtcacgcgtttcgatttcaccaccacccatggttctttggaaacctctgaggga
gagacgaacaagcctccgccgctggttgacacctccgaatctgtgacggaaatcacttca
aacagcttcgtcgtgtcctggacttcggcctcggccaccatctctggtttcagagtggag
tatgagctcagtgaggagggcgcaccgcggcaagtcttggaccttcctggaacgtccact
tcagtcaccattggtaaccttctgccagggcgcagatataacgtcaatgtctatgaggtt
cccgatgacggagatgccaccctcatcctgtcaacatcccagacgacagctcctgacact
cccgctcagcacgctatcgatgatgtcggggagacgtcgatccgcattagatggtccagg
cctcaagctcctattactggttaccgtgtggtgtacacgccttccgtggagggcagcagc
accgagctcaacctgccagacacggagacatcagtgaccctggttgaccttcaccccggt
gtgctgtacaacatcagcatctttgctgtagaggagaaccaggaaagtcagcctgttttt
ctccaggtccagacggctggatcttctcaaccagaggaggtggccgcccccaccgacctg
cagttttatgaggtcacagatgtgaagatcaccatcacgtggaatgggccacccagcgag
gtgacgggttacagggtcaccttttcccctgtcgggcctgatggcaccgagatcagaccc
ctccagttgccggtgtcgcccaacgcctacgctgacatcacccacctgcagccgggcact
ctataccgcttctatgtctacgccattaacgggggtgtggaaagcgagccactaatggga
gagatgtataccaaaccggatgctcccaccaacgtgcagttcactgacattggcccagac
agcgctctggtcagttgggaagctccccgtgctatcgtgtctggctatcgtctcttcgtg
agcatcgagggctccagtcctattgagaagagaatccccggcggtgtcacccaatacgct
ctgaggaatttgcgtcccgaaactgattatactgctactctgcactctgagctgaatagt
gtgcttagtgagcccataaccacgcatttcaccacagctccccagatgggaaatgcacct
gcgttcaacactgaggtcactgattcctccatcatcatcacctggatacctgtccgcagg
tttagctacaagctgtctgtgctccccagccagcaaggagagtctccaagacacagaacc
tctgacactggacgcctttatgtaagcggtttgattcctggaactcagtacacatacagc
gttcagcccatcttcaatggacgcccccgtggaaaccccatcacccgcaacgttgtcact
tccttgtcccctcccactgacctgagagtccagtccaactctgacacaggagatctcacc
gtccactggacagcctccaaaacaccagacatcaccggctacagagtgtccagcacgccg
accagtggacagaaaggaaacagcaacgaggagtttgtgagggctgatcaaacctcgtgc
atgctggataacctgaatctaggggtggagtacaacataagcgtcttcgccgtcaaggac
catttggaaagtgtgccagtgtccactgttatcacaccagacatacgtccaccgagacat
attcactttgtcgacataactgacaccaccattggcctgcgctggatccctctgaactat
tcgaccctaacgggttaccggataacggtaacgacggcgggcgagagcttgcccattttt
caagatatggtggacgcatcggctggttattacacgcttcgtggtttggagcctggcgtg
gactatgacatcagtatcgtcacggttacggaagagggggaaagcgagccaactacacac
acaaagcaaactcaagcggtgattccagctcccaccaacttgcaattcggaggggtgggt
cctgaccacatcagggtcacgtggacagtcccgcacgttgccaccccgagcgacatttct
cgctttgtcatccgcttcagccctgtgacagaagaccatgacttgaaggaggtcaacgtg
ggcggagcctcgaacactttcttgctgcagaacttgcttcctgacacagaatatcgcatt
agtgtggtgtacatttatggagagcgagagagctatccggccacaggaacacagaggaca
actctggattccccaactgctttggacttttctgacattcaaaccaattcgttcaccatt
cactggcgggctccatcttcaagtatcacgggttatcgggtccgccatcagaggacgaac
ggtgggcgcaccaaggacgagagacttcctccgagcaagactcattacactttgactgga
ctgactccggagactgagtatctcattgctgtgtacgctgtcaagggcaatcaggagagt
caacctgtgactggcacacaggccacgatctctgatgctcccactgacctggaagttgtg
tcatcctcgcccacaagcatcaccattcgctgggatgctccctctgttgccgtcaatcaa
taccgcatcacttatagaggcacagatggcggtgcgcctcaagagttcaccatcccaggc
actcagaccacagccactatcaccgatctgcagccgggtagtgactacaccatcacggtt
tatgcggttaccgcaagaggggataaccctgcctccaacaccccggtctacatcacacac
aagacagatattgagccgcctgctaacatggatgtgactgatgtgagcgacaacgcaatc
actgtccgctggtcccctgctcgggggcccatcacaggttatcgagtcacaggtgcaccc
aaaaatggcgtcggaccatcctactctcgggatgtgtctcctgctgaaactgagatgacc
ctcacaggcctgatgccaactgttgagtacgttgtcagcgtctctgccctgggcactgac
ggccagccctcctctgcagtggtggagaatgccatcacagccatggatcgtccaaaggac
ctgaccttctctgacatcgacgccaactccatgcgcatcgcttgggacagtccagagggc
acagtgacatcgtaccgcgttctctactccaaccccgaagatggggagaaggagctgcgt
ccggcacctagaggcgaccaggacaatgtggccataaaaggccttcgggccgggacagag
tacactgtcaaagtcattgctctccatgggcgcacacccagcacgccattggtgggaact
caggccacagtcatccccgctccgaccaacctggtcatctcagaggtggggcctacttct
ttcgaggtgtcatggcaggcacccaacgcacgactgacgggataccgtgtggtcgtcaac
cccgagaacatcaacagtcccgccaaggaacttaatgttgctcctgacacaacacgtgtg
gtcatacccgggctcatggtggcaaccaaataccagatccatgtctatgctctgaagaac
tctgtcaccagcagaccactggagggagaggcaaccacactggaagatgtaagtccacct
cgccgtgtgcgtattatggacgtgaaggacgactcgttcaccctgaactggcgcactaag
gtggaaaccattactggtttcctccttgaagccacgccccagggtagctcacgccccaca
gtcaccaagtccatcccagcagatgtatacacttacacagtcacaggtctcaagccgggt
accacatattccattcacctgtacactctgaatggcaatacaaggagcgctccagttacg
ctgactgttcaaacagctaaaccggtggtccaagctcccaccaacctccaggttacgtct
ttgacccccacctacatctccttcacgtggcaacctccagccacgcccatcacgggctac
tacgtcacctacgcggagcccagagcgacgccacaggagctgaagccacggccccacgct
ggacagaactatgccaccatatctggcctgaaaccagacactgaatatatcatcaagatt
gttgccatccagaacacacagagaagcactccgcttgtgggcagaatcaggactcaacca
gattccttgctccctgtgccacaaccccaccgccccggagatgtcactgataggctggac
gtgcctgaaacaaacttcgacaacagagtccagctggtgggcaacaatggccaggacggc
cttggtggtcagagccagcatgtggagtacaccgagtacaacaacaacaaccgggccacc
ccgcagtccccgtacgggcaagttcaagagcccctggtcttcgtgccccttcccgacgcc
aatggccgacgcaagccctacgtgaagctcaatgtgccctatggcaccatatttgccaat
gagacaggtctcccgcaggaagctcaaacgaggacccccatttcctggaagccgtacagt
cagagcaatgcgtacttggtctcctgcaatccggtaacacatttggatgagaaaatgttc
caggtgcggctgccgggcacagccaccactgccacgctggtcggcctcacccctggagcc
gactacaacgtgctggtggaggctctgaagggagcgctcaaacacaaggtcctcgagcag
gttgtcaccgctgcaaacacaatccaagaaggagctcctcccacagacgacagctgctac
gacacgctcacagcaacctaccacgatgtcggggctcagtgggaacgcatgtccgagacg
ggcttcaagctgtggtgcacatgtctgggtctcggaaggggccacttcagatgtgactcc
tccaagtggtgccatgacaatgggcaaaactaccgcgtcggggacaagtgggaccggcag
gcagagaacaatcacctgatgagctgcacctgtctgggcaacggcaaaggagagttcaag
tgtgaaccacatgaatccgtgtgctacgatgaaggaaaaacattccaagtgggcaaccag
tggcagaaagactacctgggcgccatctgtacctgcacatgctacggcggacagcggggc
tggcaatgcgagaactgccgcagaccggcctccgacgctggcgtgctgcagcctgttcaa
tatggaacagatacgttgcacagacagaatattcactgccccatcgagtgtctccgaccg
ggccttctggcagatgcgctggtggtcccggatcctcgggagtga
DBGET
integrated database retrieval system