Hippocampus comes (tiger tail seahorse): 109528455
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Entry
109528455 CDS
T04969
Name
(RefSeq) neurexin-3b isoform X1
KO
K07377
neurexin
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109528455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109528455
Membrane trafficking [BR:
hcq04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
109528455
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
109528455
NCBI-ProteinID:
XP_019746627
LinkDB
All DBs
Position
Unknown
AA seq
1716 aa
AA seq
DB search
MNPNGLPGKVLLLLSTALTLSAGLEFTGSQGQWARYLRWDASSRSDLTFQFKTSQSDGLV
LYFDDGGYCDFLLLTLSEGRMQLRFSIDCAETTIASEQMVNDSRWHFAAINRHNLRTGLA
VDGQTKSAEVRPQRQFMKIVSDLFLGGVPGDIRASAITLPSVRELAPFKGIITDLVYGSK
LPTLINSQKVRLEMLGLCTENPCENGGICSLADGETYCDCSRTGFVGRYCTEAVHRAPGL
AHLKAEQGRNKAREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLLLHTGK
SADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDIKVTRNLRQQSGIGHAM
VNKLHCLVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLK
EVVYKNNDIRLELSRLARIVDPKMKLQGDVVFKCENVPTLDPINFETPDSYLALPKWNTK
RVGSISFDFRTSEPNGLILFTHGRAQERRDAKSQKTNKVDFFAVELLDGVLYLVLDMGSG
TIKVKATQAKVNEGSWHHVDIQRDGRSGIISVNSRRTPFTASGENEILDLEGDLYLGGLP
DNRAGLVLPTELWTAMLNYGYVGCIRDLFIDGRSKDIRQIAASQNATGIKSSCSKVTGKQ
CDSNPCKNNGLCKEGWNRFICDCTATSFWDSTCEREASILSYDGSMYMKVVIPNVVHTEA
EDVSLRFMSQRAFGLLMAATSRESADTLRLELDSGRVKLTVNLDCVRINCNTSKGPEALY
AGQKLNDNNWHSVRVVRRGKNITLIVDDDMAEGQMAGDHTRLEFNNVETGILTERRFVSS
APSSFIGHLQSLKFNGMQYIDMCKNGDIDFCELNARFGMRFIIADPVTFKTKGSYLGLAT
LQAYTTMHLFFQFKTTSPDGFILFNSGDGSDFIAVELVKGFIHYVFDLGNGPSLLKGNSD
NPLNDNQWHNVVITRDASNTHTLKVDSKSVTQNVNGAKNLDLKGDLFVGGLGPNMYQNLP
KLVVSREGFQGCLASVDLNGRLPDLISDALFRSGQIERGCEVGFTKADLQGPSTTCQEDS
CANMGVCIQQWENFTCDCSMTSYSGTHCNDPGTTYIFGKGGGLITYTWPNNERPSTRTDR
LAVGFSTTIKDGILVRIDSAPRLGDYIMLHIEQGKVGVTFNIGTVDISVKEMTTAVNDGK
YHLVRFTRNGGNATLQVDNWPINEHFPSGNSDIERFQMANKKIPFKYTRPVEDWLQEKGR
QLTIFNTQATISIGGNDRKRPYQGQLSGLYYNGLKVLNMAAEGHANIKVNGSVRLVGDVP
ASRGAARTTTSVPPEMSTTFIETTTTLSTTTTRKQRSPPTIQTTDDIVSSAECSSDDEDL
EECDSGHTGGELVIPVLVEDPIDIPSVSTRSSFISLPPTLHPLLTIIETTKESLAMATEA
GRPCLSDRGGDDCDDGGDDDGDDGDDDDGMVISGFGSGEAFDSSLPPTDDEDFDNTFSLV
TDKILTTSTYEGGYKALAPKWEAKDLRPSKASEAGRTTATLPLPNPRGTPAAAAPSAALP
KLPAGKMNNREVKPPQPDIVLLPLPTSFDPDGTKPRGPYITSPMLRTVPAALPTVPGVVR
RVPPGASEVIRESSSTTGMVVGIVSAAALCILILLYAMYKYRNRDEGSYQVDETRNYISN
SAQTNGAVVKDKTPSGSAKGSAASKRPKDKDKEYYV
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaacggcctccctgggaaggttctcctgctgctaagtactgcgctgacactg
agtgcaggattagagtttactggctcccaaggtcagtgggctcgatacctgcgctgggac
gccagttcgagaagcgacctgaccttccagttcaagacatcccaatcagacggcctcgtg
ctctactttgacgacggcggatattgcgacttcttactcctcaccctgtccgagggcagg
atgcagcttcgcttcagcatcgactgcgccgaaaccaccattgcgtccgagcagatggtc
aacgacagccgctggcacttcgccgccatcaacaggcacaatttgcggaccggcttggcc
gtggacggccagaccaagtcggcggaggtgcggcctcagcggcagttcatgaagatcgtc
agcgaccttttcctcggcggggtcccgggagacatccgcgcgtctgccattaccttgccc
tcggtccgcgagctcgcaccgttcaaggggatcatcaccgacctcgtctacggaagtaaa
ctgcccacgcttatcaacagtcagaaagtccgtttagaaatgttaggcctttgcacagag
aacccctgtgagaacggagggatctgctcactggcggacggagaaacctactgtgactgc
tctcgaactggatttgtagggcgatactgcaccgaagcagtccacagagcaccaggcctc
gcgcacctcaaggcagagcaaggtagaaacaaagcgagggaggaaaatgtggccaccttc
cggggctcggagtacttctgttacgacctttcgcagaatcccatccagagcagcagcgac
gagatcacgttgtccttcaagacgtggcagcgcaacggcctcttgctccacacgggcaaa
tcggcggactatgtcaatctggcgctaaaagatggggcggtttccctggtcatcaatctg
ggttccggggcctttgaggccatcgtggagcctgtcaatgggaaattcaatgacaacgcc
tggcacgatatcaaagtcacgcgcaacctgagacagcaatcaggcattggacacgctatg
gtaaacaaactacattgtctggtgactatatccgttgatgggatcctcaccaccaccggc
tacacccaggaagactacaccatgctgggctctgacgatttcttctatgtgggtgggagc
cccagcaccgcagaccttcccggctccccagtcagcaacaatttcatgggctgcctcaaa
gaggtggtctacaaaaacaatgacatccgtctggaactgtcccgcctggcccggattgtg
gacccaaagatgaaacttcagggcgacgtggtctttaagtgtgaaaacgtccctacgctt
gaccccatcaactttgagactcccgattcctacctggccttgccaaaatggaacaccaaa
cgcgttggctccatctcgttcgacttccgaacgtcggagcccaacggcttaatacttttc
acccacggcagagctcaggagcgacgtgatgccaagtcgcagaagaccaacaaggtggac
ttctttgctgtcgagcttttggacggggtgctgtaccttgtgttggacatgggttctggt
accatcaaagtgaaagcgacgcaagcaaaagtcaatgaaggcagctggcaccacgtggac
atccagagagacggtcgctcgggcatcatctctgtaaacagccgccggacacctttcaca
gccagtggagaaaatgagatcttagacctggagggggatctttatcttggcggtcttcct
gacaaccgcgcaggtttggtcctccccactgagctctggaccgccatgctcaactacggc
tacgtgggctgcatccgggatcttttcatcgacggacgcagcaaagatatccgacagatc
gccgcgtcccagaatgcgacgggtatcaagtcttcctgcagcaaggtgacggggaaacag
tgcgacagcaacccttgcaagaacaatggactttgcaaggagggttggaaccgcttcatt
tgcgactgcacggcaaccagcttctgggacagcacttgtgaaagagaggcatccatcctg
tcctatgacggcagcatgtacatgaaggtggtgatccccaacgtggtgcacacagaagcg
gaggacgtctcactccgcttcatgtcccaaagggccttcggtctgctcatggccgccaca
tcgcgcgagtcagcagacacgttgcgattggagttggacagcggaagggtcaaactgacg
gtcaacttagattgtgtcaggataaactgtaacaccagcaagggtcctgaggctctctat
gctggacaaaagctcaacgacaacaactggcactcggtgcgagttgtccgccgcggtaaa
aacatcacactcattgtggatgacgacatggctgaaggccagatggcaggcgatcacacc
cggctagagttcaacaacgtggagacgggcatcctcactgagaggcgctttgtgtcctct
gcgccttcttcgtttatcggacacctgcagagcctcaagttcaacggcatgcagtacatc
gacatgtgcaagaacggggacatcgacttctgcgaactcaacgcccgctttggcatgcgc
ttcatcattgccgacccggtgactttcaagaccaagggcagctacttgggcctggccact
ctgcaggcgtacaccacgatgcacctcttctttcaattcaagaccacctctcccgatggc
ttcatcctctttaacagcggcgacgggagtgactttattgccgtcgaactggtcaaaggg
ttcatccactacgtgtttgacctcgggaatggcccaagtctcttaaaggggaacagtgac
aacccgctgaatgacaaccagtggcacaatgtggtgatcacgcgagatgcttccaacacg
cacacgctcaaagtggactccaagtcagtcacccagaatgtcaacggagccaagaacctt
gatttaaaaggtgatctgtttgtcggaggcctgggccccaacatgtaccagaacctccct
aagctggtggtttctcgtgaaggcttccagggctgtttggcctcagttgaccttaacggc
cgcctgccggacctcatcagcgatgcccttttccgcagcgggcagattgaacggggctgc
gaagttggtttcaccaaagccgacctgcaagggccgagcaccacctgccaggaggactcc
tgcgccaacatgggtgtgtgcatccaacagtgggagaactttacctgcgactgctccatg
acgtcttattcggggactcattgcaatgaccccggcaccacctacatcttcggcaaagga
ggcggtctgatcacatacacgtggcctaacaacgaaaggcccagcacgcggacggaccgg
ctggcggtaggttttagcaccaccatcaaagacggcattctcgtccgcatcgacagtgcg
ccgcgcctgggtgactacatcatgctccacattgagcaagggaaagtaggtgtgaccttc
aacattgggacggtggatatcagtgtgaaagagatgacgacagcggtaaatgatggcaaa
taccatttggttcgattcaccaggaatggaggaaatgctacgttacaagtggacaactgg
cccatcaatgagcactttccttcaggcaacagcgacattgagcgttttcaaatggcaaat
aagaaaatcccattcaaatatacccggcccgtagaagattggcttcaggagaaaggccgg
caactcactatcttcaacacccaagcgactatttccattggtggaaatgaccgcaagcgg
ccctaccagggccagctttcaggcctctactacaacgggctcaaggtactcaacatggcc
gccgaaggccacgccaatatcaaggtgaacggcagtgttcggctggtgggcgatgtgccg
gccagtaggggcgcagcacgcacgaccacctctgtaccgcctgagatgtccaccaccttt
atcgagaccaccaccaccttgtccacgaccaccactcgcaagcagcgctcgccacccacc
atccagacaacagatgacattgtttcatcagccgagtgctccagtgacgacgaagatctg
gaagagtgcgattctggacacacaggaggggagctagtcatccccgtcttagtggaggat
cccatagacattccttctgtatccacccgctcttctttcatctccctccccccaaccctc
caccccctcctcaccattatcgagaccaccaaagaatccttggccatggccaccgaggcg
gggcgaccttgcttgtcggaccgaggcggcgatgattgtgatgatggtggtgatgatgat
ggtgatgatggtgatgatgatgatggcatggtgatttcggggtttggctctggcgaagcg
ttcgactctagcctgcccccgactgacgatgaagattttgacaacaccttctccctggta
acagataagatcttgaccacatcaacctatgaaggcggctacaaagccctcgcacccaag
tgggaggccaaggacttgaggcctagcaaagcctctgaggcaggtaggactacggccacc
ttgcctctgcccaacccccggggcacgccagccgcggcggccccctcggccgcgcttccc
aagctgcccgctgggaaaatgaacaaccgcgaggtcaaacccccgcagccggacatagtc
ctgctgcccctccccacgtccttcgatccggacggcaccaagccgcggggtccttacatc
acctcgcccatgctgcgcacggtgcccgccgccttacccacggtgcccggcgtggtgcgg
cgagtcccgccgggggcctcggaggtcatacgggaatcgagcagcaccacgggcatggtg
gtgggcattgtctcggccgccgccctctgcatcctcatcctcctctacgctatgtacaag
tacagaaacagggacgaggggtcctaccaggtggacgagacgcgcaactacatcagcaac
tcggcgcaaaccaacggcgccgtggtgaaagataaaacccccagcggcagcgccaaaggc
agcgccgccagcaagagacccaaagacaaggacaaggaatattatgtatag
DBGET
integrated database retrieval system