Hydrogenophaga crocea: G9Q37_12470
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Entry
G9Q37_12470 CDS
T08489
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
hcz
Hydrogenophaga crocea
Pathway
hcz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hcz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G9Q37_12470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hcz02022
]
G9Q37_12470
02035 Bacterial motility proteins [BR:
hcz02035
]
G9Q37_12470
Two-component system [BR:
hcz02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
G9Q37_12470
Bacterial motility proteins [BR:
hcz02035
]
Pilus system
Twitching motility proteins
G9Q37_12470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
AAA
HTH_30
VpsR
AAA_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QIM52900
UniProt:
A0A6G8IIU6
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All DBs
Position
2640088..2641578
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AA seq
496 aa
AA seq
DB search
MPSPTPSASILVVDDEPDLRTLYELTLLREGHAVTTAADLQQAREQLASRRFDVLISDMQ
LPDGLGLSLLREVAERQRSEKCIVITAHGSAENAVESLKAGAFDYLTKPVDLRQLRSAVS
AALLSQRAPAAAPNEPQRVAPPPPSGVRALERIVGRSSSIVQIKGRIEKVATSMAPVLIL
GESGTGKELVARAVHECSHRAHGPFIAVNCGAIPENLIEAEFFGARKGAYTGASADREGY
FQAAHGGTLFLDEIGDLPLAMQAKLLRVIQERRVRALGAVQEEAVDVRLVSATHRDLPAL
VQAGQFRQDLYYRLNVIGLRTPALRDRPEDLPELAHALLVRLCHDAGQAVPDLSPAALHW
LQSRELPGNVRELENLLQRALALSSGAVLHPADFGEISDTIPDTLVDPLPAAVDAFARPS
AASDARDAALPDDLQRYLDEQERRVLLQALQACGFNRTAAAARLGLNLRQMRYRIQRLGI
MLPGAAGGADTEAGDV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgcccacgccgagtgcctccatcctggtcgtcgacgacgagccggacctgcgc
acgctgtacgaactcacgctgctgcgcgagggccatgccgtgaccaccgcggccgacctg
caacaggcgcgcgagcagctcgccagccgccgcttcgacgtgctgatctccgacatgcag
ctgcccgacggcctgggcctgtcgctgctgcgcgaggtcgccgagcgccagcgcagcgag
aagtgcatcgtcatcaccgcgcacggctcggccgagaacgccgttgaatcgctcaaggcc
ggcgccttcgactacctcaccaaaccggtcgatctgcgccagctgcgcagcgccgtgagc
gccgcgctgctgagccagcgcgcgccggccgcggcgcccaacgaaccccagcgcgtcgcg
ccgccgccgccgtcgggcgtgcgcgcgctcgaacgcatcgtgggccgctcgtccagcatc
gtgcagatcaagggccgcatcgagaaggtcgccaccagcatggcgccggtgctcatcctg
ggcgaatcgggcaccggcaaggagctggtggcgcgcgcggtgcacgaatgcagccaccgc
gcacacggcccgttcatcgcggtcaactgcggcgccattcccgagaacctgatcgaggcc
gagttcttcggcgcgcgcaaaggcgcctacaccggtgccagcgccgaccgcgaaggctac
ttccaggccgcgcacggcggcaccctcttcctcgacgagatcggcgacctgccgctggcc
atgcaggccaagctgctgcgcgtgatccaggagcgccgcgtgcgcgccctgggcgcggtg
caggaagaagcggtcgacgtgcgcctggtcagcgccacgcaccgcgacctgcccgcgctg
gtgcaggcgggccagttccggcaagacctctactaccgcctcaacgtcatcggcctgcgc
acccccgcgctgcgcgaccggcccgaggacctgcccgagctcgcgcacgcgctgctcgtg
cgcctgtgccacgacgcgggtcaggccgtgcccgacctgtcgcccgcggccctgcactgg
ctgcagtcgcgcgagctgccgggcaacgtgcgcgaactcgaaaacctgctgcagcgcgcg
ctcgcgctgtccagcggcgcggtgctgcacccggccgatttcggcgagatcagcgacacc
atccccgacaccctggtcgatcccctgcctgccgccgtggacgcgttcgcgcggccctcc
gcggcgagcgatgcgcgcgatgcggcgctgcccgacgacctgcaacgctacctcgacgag
caggagcgccgcgtgctgctgcaggcgctgcaggcctgcggcttcaaccgcaccgcggcc
gcggcccggctcgggctgaacctgcggcagatgcgctaccgcatccagcgcctgggcatc
atgctgcccggcgccgccggcggcgccgacaccgaagccggcgatgtctga
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