Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0749
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Entry
HDEF_0749 CDS
T00911
Name
(GenBank) radical SAM domain protein
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hde03009
]
HDEF_0749
Enzymes [BR:
hde01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
HDEF_0749
Ribosome biogenesis [BR:
hde03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HDEF_0749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
ACQ67479
UniProt:
C4K4I6
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All DBs
Position
742047..743228
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AA seq
393 aa
AA seq
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MSQLRPYSVSLSDIPVSIIPSESTLQTIKPTNKKINLLDFNRQKLRDFFVKIGEKPFRAD
QIMKWIYHYCYDDFSLMTDINKQLRDKLQKIAEIRAPEVAKEQSSSDGTIKWAIKVGDQQ
VETVYIPESDRATLCVSSQVGCALECRFCSTAQQGFNRNLSVSEIIGQVWRAAKIIGSLK
SKGQRPITNVVMMGMGEPLLNINNVVPAMAIMMDDFGFGLSKRRVTLSTSGVVPALDKLG
DMIDVALAISLHAPTDDIRNELVPINRKYNIETLLAAVRRYLTKSNANQGRVTIEYVMLN
HVNDSLKQAHQLADCLKNTPCKINLIPWNPFPGADYGRSSNSRIDRFAKVLMQYDFTTII
RKTRGNDIDAACGQLAGDVIDRTKRTLKKNNRW
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaattaagaccgtattctgtttcgttatcagatattcctgtcagcataatccca
tctgaaagcacactgcagactatcaaaccgactaacaaaaaaatcaacttgctggatttt
aatcgacaaaaactacgggatttttttgtcaaaataggtgaaaaaccttttcgggctgat
caaatcatgaagtggatatatcattattgttatgatgatttttctttgatgacagatatc
aacaaacagttacgtgataaattacaaaaaatagcagaaattcgtgcgccagaggtcgcg
aaagaacaaagttcttctgatggcaccattaaatgggcaataaaagtgggagatcaacag
gtcgaaaccgtttacatacccgaatcagaccgtgcaaccctctgtgtttcttcacaggtc
ggctgtgcacttgaatgtcgattttgttctaccgctcaacaaggctttaaccgaaacctg
agcgtctccgaaattattggccaagtttggcgtgctgctaaaatcatcggttctttaaaa
tcaaaaggtcaacgccctatcactaatgttgtgatgatgggtatgggagagcccttactg
aacatcaataatgttgtgccagccatggctattatgatggacgactttggttttggctta
tctaaacgacgagtcacattgtccacctctggtgttgtgcctgctttagataaattaggt
gatatgatagacgttgcactagcgatttctcttcatgccccgacggatgatatccgcaac
gaactggttcccattaatcgtaaatataatattgaaaccttgttagcagcggttcgccgt
tacttgacaaaatctaatgccaatcaaggcagagtgacgattgaatacgtcatgcttaat
catgtgaatgacagtttaaaacaagctcatcagttagctgattgtttgaaaaatactccc
tgcaaaattaatttaattccttggaatccttttcctggtgctgactatggacgtagctcc
aatagtcggatagatcgttttgcaaaggtattaatgcaatatgatttcacgacgattata
cgtaaaacccgagggaatgatattgatgctgcttgtggtcaattagcaggagatgtgatt
gatcgcaccaaacgtacattaaaaaaaaataatagatggtga
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