Halobacterium sp. DL1: HALDL1_02080
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Entry
HALDL1_02080 CDS
T03878
Name
(GenBank) DNA mismatch repair protein mutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
hdl
Halobacterium sp. DL1
Pathway
hdl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HALDL1_02080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdl03400
]
HALDL1_02080
DNA repair and recombination proteins [BR:
hdl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HALDL1_02080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
HHH_5
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AHG02554
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Position
complement(104290..106260)
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AA seq
656 aa
AA seq
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MELEAIPGVGAKTADALRSLDDPEDALERGDVAAVAAAPGVSEGRAARIVRGAIRARHDD
DSGFLATDRAREVYEVVLELLQERAVTTYAGQRLRTFYPSAADSRIAEANEFAERAMARD
PDPAVLDALQEVEPLSRPDSLAVRDRCLATTDAERYSAARETFPELSVEVVEDARGLADL
ARGYSTVVALDEAFVGVEVDGDVRVEPDALDRPEEVVPERVLSFFATNRDRIRAAVAVHQ
AAGLEADVDLGELDAALEQLESDGSVAGDEELDRLSTAVDDLDAAVSTSESVANDRLREA
IQEQDVTIEGADLLSLVERGAGVDSLLSRELADEYAAAVDAARDNLVDALELRDGEAEVA
RRAFGDDPTFPVAHDEEAVTRLREDLTAARDRRAAERKRDLAATLADLREPTRALVDRAL
ELDVELAVARFADDFDCVLAERGGRGFDIDGGRSPILDVDFEEVEPVDYGVDGVSLLSGV
NSGGKTSTLDLVAVVVVLAHMGLPVPAESARVPDVEELHYYAKSQGTLDAGAFEATLRDF
AGLTEGAAKKLVLVDELESITEPGASAKIVAGILEELHEAGASGVFVSHLAGEIAEQCGF
DVTVDGIRARGLEDGELVVERSPVKDHLARSTPELIVEKLAENGGSDFYGRLLEKF
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaactggaggcgattcccggcgtcggcgcgaagaccgctgacgctctcaggtcgcta
gacgaccccgaggacgccctggagcgcggtgacgtggcggccgtcgcggccgcgccgggc
gtcagcgaggggcgggccgcgcgcatcgtccgcggggcgattcgcgcgcgccacgacgac
gacagcggcttcctcgccaccgaccgggcgcgggaggtgtacgaggtagtcctggaactg
ctccaggagcgcgcggtgacgacgtacgcgggccagcgcctccggacgttctacccgagc
gccgccgactcgcgcatcgcggaggccaacgagttcgccgagcgcgcgatggcccgcgac
ccggaccccgcggtactggacgcactgcaggaggtcgaaccgctgtcgcggccggacagc
ctcgcggtccgggaccgctgtctcgccacgaccgacgcggagcggtatagcgcggcccgc
gagacgttccccgagctgtccgtcgaagtcgtggaggacgcccgggggctcgcggacctg
gcgcggggctactcgacggtggtcgcgctcgacgaggcgttcgtcggcgtcgaggtggac
ggcgacgtgcgcgtcgaacccgacgctctcgaccgaccggaggaggtcgtcccggagcgc
gtgctctccttcttcgcgacgaaccgcgaccgcatccgggcggccgtcgccgtccaccag
gccgcggggctggaggcggacgtcgacctgggcgaactcgacgcggcgctcgaacagctc
gaatccgacgggagcgtcgcgggcgacgaggaactcgaccgcctgtcgacggccgtcgac
gacctcgacgctgccgtctcgacctccgagtccgtggcgaacgaccgactccgggaggcg
attcaggagcaggatgtgaccatcgagggcgcggacctcctctcgctcgtggagcgcggc
gcgggcgtcgacagcctgctctcccgcgagctcgccgacgagtacgccgcggccgtcgac
gccgcccgcgacaacctcgtggacgccctcgaactgcgggacggggaggcggaggtggcg
cgtcgggcgttcggcgacgacccgacgttccccgtggcccacgacgaggaggccgtcacg
cggctccgcgaggacctcaccgcggcccgggaccggcgcgccgccgagcgcaaacgggac
ctcgcagcgaccctcgcggacctccgggagccgacgcgagcgctcgtcgaccgcgcgctc
gaactggacgtcgaactggcggtggcgcggttcgccgacgacttcgactgcgtgctcgcc
gagcgcggcggccgcggcttcgacatcgacggcgggcgctcacccatcctcgacgtcgac
ttcgaggaagtcgaacccgtggactacggcgtcgacggcgtctccctgctgtcgggcgtg
aactccggcgggaagacgagcacgctggacctcgtagcggtcgtcgtcgtgctcgcgcac
atgggcctcccggtgcccgcggagtccgcccgcgtccccgacgtggaggaactccactac
tacgcgaagtcccaggggaccctggacgcgggcgccttcgaggcgacgctccgggacttc
gcgggactcacggagggcgcagcgaagaaactcgtgctcgtcgacgaactcgaatcgatt
acggagcccggcgcgtcggcgaagatcgtcgcgggcatcctcgaggaactccacgaggcg
ggcgcttccggcgtcttcgtctcccacctcgcgggtgagattgccgagcagtgcggcttc
gacgtgaccgtcgacggcatccgcgcgaggggactggaggacggcgaactcgtcgtcgag
cgctcgcccgtgaaggaccacctcgcgcgctcgacgccggagctcatcgtggagaaactc
gcagagaacggcggcagcgacttctacggccgcctgctcgagaagttctag
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