Hyphomicrobium denitrificans ATCC 51888: Hden_2623
Help
Entry
Hden_2623 CDS
T01265
Name
(GenBank) ATP dependent DNA ligase
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
ADJ24419
UniProt:
D8JTA1
LinkDB
All DBs
Position
2682753..2684732
Genome browser
AA seq
659 aa
AA seq
DB search
MRAFARLLDCLVYTQSRNRKTALLARYFRSTPDPDRGWALAALTDGIPIRLPLRRMVGDL
TGRFIDPILYQLSRDYVGDTAETVALLWPDEPVDLMRVETTSSDPSPQGVEREEESAVPS
TTRGRARREKLDDKSRQLSLDFTPTPDPSPRGGGENETAPLARKEHKQERRAIAVNVDDR
RSQDDTRSASQPRSEITDRARSDVGHNSGEPAYLSLGNIIGEMANGTAAERTVRLGQFLN
ALDASGRWALLKLLGGAPRVGVSARLARTALAEAYGRDVSEIEEIWHALEPPYLDLFAWL
DGKAERPDPGSKPVFRPVMLAHPVEEEDWPKLAPEDFIAEWKWDGIRVQISARGGDVRMF
SRQGDDISGTFPEIRSAFEGHDCVVDGELLIMRDGEIAPFNDLQQRLNRKVVTAKMMTAF
PPHVRLYDLLFDGPEDLRALPFSERRARLETWHAREHPRLTDVSPLVGFTTFDDLNVLWS
SSRAEGIEGLMLKRRDSAYQAGRIKGQWWKWKRAALTLDCVLMYAQRGSGKRSSYYSDYT
FGVWQEDTGGERQLVPVGKAYSGFTDEELLLLDRWIRNNTVETFGPVRAVAPGIVFEVAF
DAVHVSTRHKSGVAMRFPRIHRIRWDKPAAEADTLETVLRLVSGGAEVTAEGSADIEER
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctttcgcccgcctgctcgactgtctcgtctatacgcaaagccgcaatcgcaag
acggcgctgctcgcgcgttatttccggtcgacgcctgatccggatcgcggctgggccttg
gcggcgctgacggacggaattccgatccgattgccgctgcggcgcatggtgggcgatctc
accggtcgtttcatcgatcccattctgtatcagctctcacgggattacgtcggcgacacg
gcggagaccgtcgcgctgctctggccggacgagccggtggatttgatgcgcgttgaaact
acctcctccgatccttcaccgcagggagtggaacgagaggaggaatccgctgtcccctcg
acgacgagggggcgggcgcggcgtgaaaagctcgacgataaatcgcggcaactgtctctg
gatttcacccccacccctgacccctccccgcgagggggaggggaaaatgagacagcgcct
ttagcgcgcaaagaacataagcaggagcgtcgcgcgatcgctgtgaacgtggatgatcgc
cgatcgcaagacgacacccgttcagcttctcaaccccgctcggagatcacagatcgggcg
cggagcgacgtcgggcacaattcgggagagccggcgtatctttcgcttggaaacatcatc
ggcgaaatggcgaacgggacggcggccgaacgcaccgtgcgtctcgggcagttcctgaat
gcactcgatgcctctgggcgatgggcgcttctgaagttgctcggcggcgctccgcgtgtc
ggcgtttcggcgcgtctcgcacgcacggcgctggcggaagcctacggacgcgacgtttcc
gagatcgaggaaatctggcacgcgctggagccgccgtatctcgatctcttcgcgtggctc
gacggcaaagccgagcgtcccgatcccggttcgaagccggtgtttcgtcccgtcatgctc
gcgcatccggtcgaggaagaggattggccgaagctcgcgccggaagatttcatcgcggaa
tggaaatgggacggcatccgcgtgcagatttcggcgcgcggcggcgacgtgcgcatgttc
tcgcgccagggcgacgacatctcggggacttttccggaaattcgcagcgccttcgaaggg
cacgattgcgtcgtggacggagaattgctgatcatgcgcgatggcgagatcgcgccgttc
aacgacttgcagcagcgtctcaaccgcaaagtcgtgacggcgaaaatgatgacggccttc
ccgccgcacgtcaggctgtacgatctgctgttcgatgggccggaggatttacgcgcgctg
ccgttcagcgagcgccgggcgcggctcgagacgtggcatgcgcgagagcatccgcgattg
accgacgtgtcgccgctcgtcggcttcaccacgttcgacgatctcaacgtgctttggtcg
tcgtcgcgcgccgagggcatcgaaggcctgatgctgaagcgtcgcgacagcgcgtatcaa
gcgggccggatcaagggccaatggtggaaatggaagcgcgccgcgctgacgctcgattgc
gtgctgatgtacgcgcagcggggctccggcaagcggtcgtcgtactattccgactacacg
ttcggcgtctggcaggaggataccggcggagagcgtcagctcgtgcccgtcggcaaggcg
tattccggcttcaccgacgaagagctgctgcttctcgaccgttggatcagaaacaacacc
gtcgagacttttgggccggttcgcgccgtcgcgccgggtatcgtgttcgaggtggcgttc
gatgcggtgcatgtgtcgacgcggcacaagtcgggtgtggcgatgcgctttccgcgtatt
catcgcatccgctgggataagcccgcggcggaagccgacacgctggagacggttcttcgc
ctcgtgagtggcggtgccgaggttaccgctgaaggctcagctgacatcgaggaacgctga
DBGET
integrated database retrieval system
