Hyphomicrobium denitrificans ATCC 51888: Hden_2721
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Entry
Hden_2721 CDS
T01265
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdn03016
]
Hden_2721
Enzymes [BR:
hdn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Hden_2721
Transfer RNA biogenesis [BR:
hdn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hden_2721
Prokaryotic type
Hden_2721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ADJ24517
UniProt:
D8JTW9
LinkDB
All DBs
Position
complement(2798200..2798940)
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AA seq
246 aa
AA seq
DB search
MPRYRITIEYDGTPFIGWQRQAEGVSIQGALETAIRKFSGEAPGVRGAGRTDAGVHALGQ
VAHFDLEKTWEPGRIRDAMNFHLRPNPIGVVAAAQVDDAFDARFSAVKRYYEYRLLTRRA
PPILQRHRVWWTMQNLDAAAMHAAAQELVGKHDFTTFRAAQCQAKSPVKTLDVFDVSREG
EEIVCRVSARSFLHHQVRSMVGSLKLVGEGKWSRADLASALAAANREACGPVAPAAGLYL
VGVDYE
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgccccgctaccgcatcaccatcgaatatgacggcacgcccttcatcggctggcagcgc
caggccgaaggcgtgtcgattcaaggcgcgctcgaaacggcgatccgcaaattctctggc
gaagcgccgggcgtgcgcggcgctgggcgaacggacgccggcgtgcacgcgctaggacaa
gtcgcgcacttcgatctcgaaaagacatgggagccgggacgcatccgcgatgcgatgaat
ttccacctgcgtccaaatccgatcggtgtggttgccgccgctcaggttgacgacgcgttc
gacgcgcgcttcagcgccgtgaagcgctactacgaatatcgcctgctgacacgccgcgcg
ccgccgatcctgcagcgccatcgcgtctggtggacgatgcaaaacctcgacgccgccgca
atgcatgccgccgcgcaagaactcgtcggaaagcacgatttcacgacgtttcgcgccgct
cagtgccaggcgaaatcgccggtcaagactctcgatgtttttgacgtgtcacgggaaggc
gaggaaatcgtctgccgcgtctcggcccgctcgttcctacatcatcaggtccgctcaatg
gtcggcagcctgaagcttgtcggcgaaggcaaatggagccgcgccgatcttgcgtccgcg
ctcgccgccgccaatcgcgaagcctgcggaccggtcgcgcccgcggccggtctctatctc
gtcggcgtcgattacgaatag
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