Hyphomicrobium denitrificans 1NES1: HYPDE_39473
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Entry
HYPDE_39473 CDS
T02646
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt00020
Citrate cycle (TCA cycle)
hdt00785
Lipoic acid metabolism
hdt01100
Metabolic pathways
hdt01110
Biosynthesis of secondary metabolites
hdt01120
Microbial metabolism in diverse environments
hdt01200
Carbon metabolism
hdt01210
2-Oxocarboxylic acid metabolism
Module
hdt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hdt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HYPDE_39473 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HYPDE_39473 (sucA)
Enzymes [BR:
hdt01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
HYPDE_39473 (sucA)
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AGK59563
UniProt:
N0B956
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All DBs
Position
complement(3354232..3357192)
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AA seq
986 aa
AA seq
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MSRNGQNEAFLRTSFLSVANAPYIEDMQAEYERNPGAVSDEWRRFFDSIKEPAATQPVTG
GPAWAPPLEALLTETGTERDLVAALTGDYGETERTIRDKIERRAQIAGFEMTPAASLRAT
QDSIRALMLIRAYRVIGHLAADLDPLGLADRRVHRELLPETYGFTEGDLDRPIFIDRVMG
LETATMRQMLTILRRTYCRQIGFQFMHITDPAQKSWIQERIEGLEKDISFTLEGRKAILR
KLIEAETFEKFCDLKYTGTKRFGLEGAEAMIPALEQIIKRGGHLGVREIALGMAHRGRLN
VLANVMAKPLRAIFKEFKGGSFKPDDVEGSGDVKYHLGASSDRMFDGNSVHLSLTANPSH
LEIVDPVVLGKVRAKQDQQGCSGGDRTPVLPLLIHGDAAFAGQGVVAECFGLSGLRGHRT
GGSLHFIINNQIGFTTAPHHSRSSPYCSDVALMIEAPIFHVNGDSPEAVVHVAKIATEFR
QRFQKPVVIDMFCYRRHGHNETDEPMFTQPAMYKQIKAHPTIVESYSRSLIDEGVLTTAE
FDEMKASVRTNLDKEFAVSDGYKPNKADWLDGRWSGITRPDSDDWRGNTGIPVETLKDLG
RRLTSIPNDFHIHKTIAKLLERRRNMTEAGVGIDWAMGEHLAFASLLMERFRVRLSGQDC
ERGTFSQRHAVFVDQETDRRFAPLKHLAPNQASFEIVNSMLSEEAVLGFEYGYSLAEPNA
LTLWEAQFGDFANGAQVVFDQFVSSAERKWLRMSGLVCLLPHGYEGQGPEHSSARLERFL
QLCAEDNWQVANCTTPANYFHILRRQLHRNFRKPLILMTPKSLLRHKRVTSKIDEFGSGT
SFHRLLWDDAERGVSAVKLRPDDEIKRVVVCSGKVYYDLLDARDAQGRDDVYLLRVEQLY
PFPARALIQELGRFKFAEIVWCQEEPKNMGAWYFMDANIEWVLTHLGYIHRRPRYAGRPA
SASTATGLLSQHVKEQTALVADALGT
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgaaatggccagaacgaagcgttccttcgcacctcgttcctgagcgttgccaat
gcaccctacatcgaggatatgcaggccgaatacgagcgcaatcctggcgccgtcagcgac
gaatggcgacggttcttcgacagcattaaggagccggccgcgacgcagcccgtaaccggc
ggccccgcctgggcgccaccgcttgaagcgctgctgactgagaccggcaccgaacgcgat
cttgtcgccgctttgacgggcgactacggcgaaaccgagcgcaccatccgcgataagatc
gagagacgcgcacagatcgcaggcttcgagatgacgccggcggcatcgctccgcgcgacg
caggattcgatccgcgccctgatgctgatccgcgcctatcgcgtcatcggccatctcgcc
gccgacctcgatccgctcggtcttgccgatcgccgggttcaccgcgagctgttgcccgag
acgtatgggttcaccgaaggcgatctcgaccggccgattttcatcgatcgtgtcatgggc
ctcgaaacggcgacgatgcgccagatgctgacgatcctgcggcgcacgtattgccgccag
atcggcttccagttcatgcacatcaccgatccggcgcaaaagagctggattcaggaacgg
atcgaggggctggaaaaggacatcagtttcacgctcgagggccgcaaagcgattctgagg
aagctcatcgaagccgagaccttcgagaagttctgcgatctgaaatacaccggtaccaag
cgttttggcctcgaaggcgcagaggcgatgatcccggcgctcgagcagatcatcaaacgc
ggcggtcatttgggcgtccgggagatcgcgctgggcatggctcaccgcggccgcctcaat
gtgctcgccaacgtcatggcgaagccgctccgcgcgatcttcaaggagttcaagggcggt
tcgttcaagcctgacgatgtcgaaggctccggcgacgtcaaatatcacctcggcgcatcg
tcggatcgcatgttcgacggcaacagcgtgcatctttcgctgacggctaacccgtcgcac
cttgagatcgtcgatcccgtcgtgctcggaaaagtgcgggcgaagcaggatcagcaggga
tgttcaggcggcgaccggaccccggtcctgccgctcctcattcacggtgacgcagccttt
gcgggccagggcgtcgtcgcggaatgtttcggactctcgggactgcgcggtcaccgcaca
ggcggctcgctccacttcatcatcaacaaccagatcgggtttacgacggccccgcaccat
tcgcgctcgtcgccgtattgctccgacgtcgccttgatgatcgaagccccgattttccac
gtcaacggcgacagtccggaagccgtcgtccacgtcgcgaagatcgcaaccgagttccgc
cagcgcttccagaagcccgtcgtcatcgacatgttctgctatcgccgtcacggtcacaac
gagacggacgagccgatgttcacgcagccggcgatgtacaagcagatcaaggcgcatccg
accatcgtcgaaagctattcacgatcgctcattgacgaaggcgttctcacaaccgctgaa
ttcgatgagatgaaagcgtcggtgcgcaccaatcttgacaaagagttcgcggtctcggac
ggctacaaaccgaacaaggcggattggctcgacggccgttggtcgggcattacacgcccc
gatagcgacgactggcgcggcaataccggaattcccgttgagacgctgaaggatcttggc
cgccgcctgacctcgatccccaacgatttccacatccataagacgatcgccaagcttctt
gaacgccgccgcaacatgaccgaggccggggtcgggatcgattgggcgatgggtgagcac
ctcgcgttcgcgtcactgttgatggagcggttccgcgtcaggctttcgggccaggactgc
gaacgcggaacgttctcacaacgtcacgccgtgtttgtggaccaggaaacggatcgccgc
tttgcgccgctcaagcatttggctcccaatcaggcaagctttgagatcgtcaattcgatg
ctgtcggaagaagccgtgctcggctttgaatacggctactcgctggccgagcccaatgca
ctgacgctgtgggaagcccagtttggcgacttcgctaacggcgcccaggtcgtattcgac
cagttcgtctcctccgccgagcgcaaatggttgcgcatgtcgggcctcgtctgtcttctg
ccgcatggttacgaaggccagggcccggaacattcctccgcgcggcttgaacgcttcctg
caactctgcgccgaagacaattggcaggtcgcaaactgcacgacgcccgccaactatttt
catattctccgtcgccagttgcatcggaacttccgcaagccgctgattttgatgacgccg
aagtcgctgctccggcacaaacgcgtcacgtcgaagatcgacgagtttggctctggaacg
agcttccatcgtctgttgtgggatgacgcggaacggggcgtttccgccgtcaaactccgg
cccgacgacgaaatcaagcgcgtcgtagtctgctctggcaaagtctattacgatcttctc
gatgcccgcgacgctcaagggcgcgacgatgtttatctgctccgtgtcgagcagctttat
ccgttcccggcgcgcgccctgatccaggaactcggtcgttttaaatttgccgaaattgtc
tggtgccaggaagagcctaaaaacatgggcgcttggtacttcatggatgcgaatatcgaa
tgggtactgacccatttggggtatattcaccgccgcccgcgttatgctgggcggccggcg
tccgcatcgactgcgaccggactgctttcgcagcatgtcaaagaacagaccgcgctcgtc
gccgacgcgctcggaacataa
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