Herbiconiux sp. SALV-R1: HL652_18885
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Entry
HL652_18885 CDS
T06594
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hea
Herbiconiux sp. SALV-R1
Brite
KEGG Orthology (KO) [BR:
hea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hea03032
]
HL652_18885 (gyrB)
03400 DNA repair and recombination proteins [BR:
hea03400
]
HL652_18885 (gyrB)
Enzymes [BR:
hea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HL652_18885 (gyrB)
DNA replication proteins [BR:
hea03032
]
Prokaryotic type
DNA Topoisomerases
HL652_18885 (gyrB)
DNA repair and recombination proteins [BR:
hea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HL652_18885 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QJU55479
UniProt:
A0A6M5J3E1
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All DBs
Position
3952722..3954695
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AA seq
657 aa
AA seq
DB search
MSESDKVHPENEYGADQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEIVDNSVDEALA
GYATHIEVVMRKDGGITVVDNGRGIPVDMHPTEKKSTVEVVLTVLHAGGKFGGGGYAVSG
GLHGVGSSVVNALSSELDVEVRRQGNVYRQSYKIGVPLAPLEKGESTNETGTKTTFWPNP
DIFETVVFDYETLRARFQQMAFLNKGLSITLTDERGGEDGTEDDTVVTYLYENGLKDYVE
YLNTSKKADLVNEEIISFESEDTDRKIALEVAMQWTTAYTESVHTYANTINTHEGGTHEE
GFRAALTTLVNRYAREKNIIKEKDDNLSGDDVREGLTAVISIKLAEPQFEGQTKTKLGNT
EAKAFVQRVVGTELTDWFDRNPVQARDIIRKAIQASQARLAARKAREQTRRKGLLEGGGM
PGKLKDCSSRDPSRSEIFIVEGDSAGGSAIQGRNPETQAILPLRGKILNVEKARLDRALG
NAEVQAMITAFGAGIGEDFNPEKARYHKIVLMADADVDGQHITTLLLTLVFRYMRPLIEL
GYVYLAMPPLYRLKWSNAPHEYVYSDAERDALLVDGQAAGKRIPKDNGIQRYKGLGEMDY
KELWDTTMDPDTRTLRQITLDDAVAADEIFSTLMGEDVESRRNFIQKNAKDVRFLDI
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcggacaaggtccacccagagaacgagtacggcgcggaccagatccaggtt
cttgaaggtctcgaggcggtgcgcaagcgccccggcatgtacatcggttcgacgggcccg
cgcggtctccaccacctggtgtacgagatcgtcgacaactcggtcgacgaagcactcgcc
ggctacgccacccacatcgaagtggtgatgcggaaggacggcggcataacggtcgtcgac
aacggccgcggcatcccggtcgacatgcaccccaccgagaagaagtcgaccgtcgaggtc
gtgctcacggtgctgcacgccggcggcaagttcggcggcggcgggtacgccgtctcgggt
ggtctgcacggcgtgggctcgtcggtggtgaacgcgctgtcgagcgagctcgacgtggag
gtgcgccggcagggcaacgtctaccggcagagctacaagatcggcgtgccgctcgctccg
ctggagaagggggagtcgacgaacgagaccggcacgaagaccaccttctggccgaacccc
gacatcttcgagaccgtcgtgttcgactacgagacgctgcgcgcacggttccagcagatg
gccttcctcaacaagggcctcagcatcacgctcaccgacgagcgcggcggcgaagacggc
acggaggacgacaccgtcgtcacctatctctacgagaacggcctgaaggactacgtcgag
tacctcaacacctcgaagaaggccgatctcgtgaacgaggagatcatctcgttcgagtcg
gaggacaccgatcgcaagatcgccctcgaggtcgcgatgcaatggacgaccgcctacacc
gagagcgtgcacacctacgccaacaccatcaacacccacgagggcggcacgcacgaagag
ggcttccgcgccgcgctcaccacgctggtgaacaggtacgcgcgcgagaagaacatcatc
aaggagaaggacgacaacctctccggcgacgacgtgcgcgagggtctgacggcggtcatc
tcgatcaagctggccgagccgcagttcgagggccagaccaagaccaagctcggcaacacc
gaggcgaaggcgttcgtgcagcgtgtcgtgggcaccgagctcaccgactggttcgaccgc
aacccggtgcaggcgcgcgacatcatccgcaaggccatccaggcctcgcaggcccgcctc
gccgcccgcaaggcccgcgagcagacccggcgcaaggggctgctcgagggcggcggcatg
cccggcaagctcaaggactgctcgagccgcgacccctcccgcagcgagatcttcatcgtg
gagggcgactcggccggcggctccgccatccagggccgcaaccccgagacgcaggccatc
ctgcccctccgcggcaagatcctgaacgtcgagaaggcccgcctcgaccgcgcgctcggc
aacgccgaggtgcaggcgatgatcacggccttcggcgctggcatcggggaggacttcaac
cccgagaaggccaggtatcacaagatcgtgctcatggccgacgccgacgtcgacggccag
cacatcacgaccctgctcctcaccctggtgttccgctacatgaggccgctcatcgagctg
ggttacgtgtacctcgcgatgcccccgctctaccgcctcaagtggtcgaacgccccgcac
gagtacgtgtactccgacgccgagcgcgacgcactgctggtcgacgggcaggcggcaggc
aagcgcatcccgaaagacaacggcatccagcgctacaagggtctcggcgagatggactac
aaggagctgtgggacacgacgatggaccccgacacccgcaccctccgccagatcaccctc
gacgacgccgtggcggccgacgagatcttctccaccctgatgggcgaagacgtggagtcg
cggcgcaacttcatccagaagaacgccaaagacgtccgcttcctcgacatctga
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