Herbaspirillum sp. meg3: hmeg3_17905
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Entry
hmeg3_17905 CDS
T05024
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
hmeg3_17905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hee03400
]
hmeg3_17905
DNA repair and recombination proteins [BR:
hee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
hmeg3_17905
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
hmeg3_17905
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Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_C
Toprim
RecR_ZnF
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ASU39979
UniProt:
A0A223PD27
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Position
complement(3990398..3990994)
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AA seq
198 aa
AA seq
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MKTPSSLTLLTESLRTLPGIGPKSAQRMAYHLLQYDRDGALQLSRALAQAAETIRHCALC
NTFTEQVICDTCQDGERDTTVLCVVETPSDQLMIEQTLTFKGLYFVLMGRLSPLDGIGPK
DIHLEKLITRATDGVVSEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGEL
EYVDAGTIARAMLDRRVT
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaccccgtccagtctcaccctgcttacggaatccctgcgtactcttcccggcatc
ggtcccaaatctgcgcagcgcatggcttaccatctgctgcagtatgatcgcgacggcgct
ttgcagctgagccgtgcactcgctcaggctgcagaaacaatccgccactgcgcgctgtgc
aatacgttcaccgaacaagtcatttgcgacacttgccaggatggcgagcgcgacacgacc
gttctctgcgtggtcgagacacccagcgatcaactgatgatcgagcagacgctgaccttc
aagggtttgtatttcgtgctcatgggacgtctgtcgccgctggacggtatcggtcccaag
gacattcatctggaaaaactgatcacgcgcgccactgatggcgtcgtgtcggaagtggtg
ctggccaccaacttcaccaatgaaggcgaagccacggctcactacatcagtgaaacgctc
aaagcgcgcggtctcaaagtgagccgtctggcgcgcggtgtgccggtgggaggtgaattg
gaatatgtcgacgcaggcacgattgcccgagccatgctggaccggcgcgtaacgtag
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